RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 IGF2RP11717 2491 aa8.44□□□□□ -1.06
PALB2-206ENST00000568219 CDX4O14627 284 aaPredicted RBP8.44□□□□□ -1.06
PALB2-206ENST00000568219 CTSGP08311 255 aa8.44□□□□□ -1.06
PALB2-206ENST00000568219 KHDC1LQ5JSQ8 128 aa8.44□□□□□ -1.06
PALB2-206ENST00000568219 ACACBO00763 2458 aa8.43□□□□□ -1.06
PALB2-206ENST00000568219 SHISA9B4DS77 424 aa8.43□□□□□ -1.06
PALB2-206ENST00000568219 J3QQQ9 107 aa8.43□□□□□ -1.06
PALB2-206ENST00000568219 RS1O15537 224 aa8.43□□□□□ -1.06
PALB2-206ENST00000568219 SPRY4Q9C004 299 aa8.43□□□□□ -1.06
PALB2-206ENST00000568219 DCHS1Q96JQ0 3298 aa8.43□□□□□ -1.06
PALB2-206ENST00000568219 ATXN8Q156A1 80 aa8.43□□□□□ -1.06
PALB2-206ENST00000568219 VMO1Q7Z5L0 202 aa8.43□□□□□ -1.06
PALB2-206ENST00000568219 TECTAO75443 2155 aa8.43□□□□□ -1.06
PALB2-206ENST00000568219 OTOGLQ3ZCN5 2332 aa8.43□□□□□ -1.06
PALB2-206ENST00000568219 C11orf86A6NJI1 115 aa8.43□□□□□ -1.06
PALB2-206ENST00000568219 PPP1R17O96001 155 aa8.43□□□□□ -1.06
PALB2-206ENST00000568219 ZNF876PQ49A33 203 aa8.43□□□□□ -1.06
PALB2-206ENST00000568219 KALRNO60229 2985 aa8.43□□□□□ -1.06
PALB2-206ENST00000568219 IGF1P05019 195 aa8.42□□□□□ -1.06
PALB2-206ENST00000568219 IGLC6P0CF74 106 aa8.42□□□□□ -1.06
PALB2-206ENST00000568219 PAX8Q06710 450 aa8.42□□□□□ -1.06
PALB2-206ENST00000568219 PMVKQ15126 192 aa8.42□□□□□ -1.06
PALB2-206ENST00000568219 OPRPNQ99935 248 aaPredicted RBP8.42□□□□□ -1.06
PALB2-206ENST00000568219 SDHAF1A6NFY7 115 aa8.42□□□□□ -1.06
PALB2-206ENST00000568219 M0R2P5 195 aa8.42□□□□□ -1.06
PALB2-206ENST00000568219 ZNF883P0CG24 379 aa8.42□□□□□ -1.06
PALB2-206ENST00000568219 NFE4Q86UQ8 179 aa8.42□□□□□ -1.06
PALB2-206ENST00000568219 NUP37Q8NFH4 326 aa8.42□□□□□ -1.06
PALB2-206ENST00000568219 TLN2Q9Y4G6 2542 aa8.42□□□□□ -1.06
PALB2-206ENST00000568219 COL5A1P20908 1838 aaPredicted RBP8.42□□□□□ -1.06
PALB2-206ENST00000568219 IGKV3OR2-268A0A0C4DH90 116 aa8.42□□□□□ -1.06
PALB2-206ENST00000568219 FCN3O75636 299 aa8.42□□□□□ -1.06
PALB2-206ENST00000568219 CFC1BP0CG36 223 aa8.42□□□□□ -1.06
PALB2-206ENST00000568219 CFC1P0CG37 223 aa8.42□□□□□ -1.06
PALB2-206ENST00000568219 BAALCQ8WXS3 180 aa8.42□□□□□ -1.06
PALB2-206ENST00000568219 U3KQK5 164 aa8.42□□□□□ -1.06
PALB2-206ENST00000568219 ANKRD11Q6UB99 2663 aaPredicted RBP8.42□□□□□ -1.06
PALB2-206ENST00000568219 USP9YO00507 2555 aaPredicted RBP8.42□□□□□ -1.06
PALB2-206ENST00000568219 VCYO14598 125 aa8.41□□□□□ -1.06
PALB2-206ENST00000568219 ATP6V0E1O15342 81 aa8.41□□□□□ -1.06
PALB2-206ENST00000568219 COLQQ9Y215 455 aaPredicted RBP8.41□□□□□ -1.06
PALB2-206ENST00000568219 CCL21O00585 134 aa8.41□□□□□ -1.06
PALB2-206ENST00000568219 NDUFA11Q86Y39 141 aa8.41□□□□□ -1.06
PALB2-206ENST00000568219 FANCD2OSQ96PS1 177 aa8.41□□□□□ -1.06
PALB2-206ENST00000568219 JPT2Q9H910 190 aa8.41□□□□□ -1.06
PALB2-206ENST00000568219 TACC2O95359 2948 aa8.41□□□□□ -1.06
PALB2-206ENST00000568219 H3BMM0 161 aa8.41□□□□□ -1.06
PALB2-206ENST00000568219 IGLV1-47P01700 117 aa8.41□□□□□ -1.06
PALB2-206ENST00000568219 CD28P10747 220 aa8.41□□□□□ -1.06
PALB2-206ENST00000568219 UBE2WQ96B02 151 aa8.41□□□□□ -1.06
PALB2-206ENST00000568219 DUX3Q96PT4 197 aa8.41□□□□□ -1.06
PALB2-206ENST00000568219 CEP192Q8TEP8 1941 aa8.4□□□□□ -1.06
PALB2-206ENST00000568219 TEX49A0A1B0GTD5 131 aa8.4□□□□□ -1.06
PALB2-206ENST00000568219 RNF5Q99942 180 aa8.4□□□□□ -1.06
PALB2-206ENST00000568219 CFAP126Q5VTH2 177 aa8.4□□□□□ -1.06
PALB2-206ENST00000568219 CITED1Q99966 193 aa8.4□□□□□ -1.06
PALB2-206ENST00000568219 RBAKDNA6NC62 111 aa8.4□□□□□ -1.07
PALB2-206ENST00000568219 MUSTN1Q8IVN3 82 aa8.4□□□□□ -1.07
PALB2-206ENST00000568219 DMXL2Q8TDJ6 3036 aa8.39□□□□□ -1.07
PALB2-206ENST00000568219 IGHV3OR16-12A0A075B7B8 117 aa8.39□□□□□ -1.07
PALB2-206ENST00000568219 LINC00574Q9H8X3 128 aa8.39□□□□□ -1.07
PALB2-206ENST00000568219 C11orf21Q9P2W6 132 aa8.39□□□□□ -1.07
PALB2-206ENST00000568219 TRAV4A0A0B4J268 109 aa8.39□□□□□ -1.07
PALB2-206ENST00000568219 LINC01548A6NM66 108 aa8.39□□□□□ -1.07
PALB2-206ENST00000568219 RNASE1P07998 156 aaKnown RBP8.39□□□□□ -1.07
PALB2-206ENST00000568219 NCOR2Q9Y618 2525 aa8.38□□□□□ -1.07
PALB2-206ENST00000568219 IGLV11-55A0A075B6I3 123 aa8.38□□□□□ -1.07
PALB2-206ENST00000568219 TRAV12-2A0A075B6T6 113 aa8.38□□□□□ -1.07
PALB2-206ENST00000568219 KNCNA6PVL3 124 aa8.38□□□□□ -1.07
PALB2-206ENST00000568219 BUB3O43684 328 aa8.38□□□□□ -1.07
PALB2-206ENST00000568219 MORN3Q6PF18 240 aaPredicted RBP8.38□□□□□ -1.07
PALB2-206ENST00000568219 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.38□□□□□ -1.07
PALB2-206ENST00000568219 PHLDA1Q8WV24 401 aaPredicted RBP8.38□□□□□ -1.07
PALB2-206ENST00000568219 TRBV6-1A0A0K0K1D8 114 aa8.38□□□□□ -1.07
PALB2-206ENST00000568219 CCDC179H3BU77 68 aa8.38□□□□□ -1.07
PALB2-206ENST00000568219 ID1P41134 155 aa8.38□□□□□ -1.07
PALB2-206ENST00000568219 CIRBPQ14011 172 aaKnown RBP8.38□□□□□ -1.07
PALB2-206ENST00000568219 Q6ZS46 218 aa8.38□□□□□ -1.07
PALB2-206ENST00000568219 EDA2RQ9HAV5 297 aa8.38□□□□□ -1.07
PALB2-206ENST00000568219 TNFRSF18Q9Y5U5 241 aa8.38□□□□□ -1.07
PALB2-206ENST00000568219 ADGRG4Q8IZF6 3080 aa8.38□□□□□ -1.07
PALB2-206ENST00000568219 NDUFV3P56181 108 aaKnown RBP8.37□□□□□ -1.07
PALB2-206ENST00000568219 DUX5Q96PT3 197 aa8.37□□□□□ -1.07
PALB2-206ENST00000568219 SMAD5-AS1Q9Y6J3 95 aa8.37□□□□□ -1.07
PALB2-206ENST00000568219 TRBV7-3A0A075B6L6 115 aa8.37□□□□□ -1.07
PALB2-206ENST00000568219 A0A0J9YXV3 536 aa8.37□□□□□ -1.07
PALB2-206ENST00000568219 FOXC1Q12948 553 aa8.37□□□□□ -1.07
PALB2-206ENST00000568219 PRR30Q53SZ7 412 aaPredicted RBP8.37□□□□□ -1.07
PALB2-206ENST00000568219 DAND5Q8N907 189 aa8.37□□□□□ -1.07
PALB2-206ENST00000568219 GATD1Q8NB37 220 aa8.37□□□□□ -1.07
PALB2-206ENST00000568219 USP9XQ93008 2570 aaPredicted RBP8.37□□□□□ -1.07
PALB2-206ENST00000568219 C9orf153Q5TBE3 101 aa8.37□□□□□ -1.07
PALB2-206ENST00000568219 Q8N1Y9 231 aa8.37□□□□□ -1.07
PALB2-206ENST00000568219 CARD19Q96LW7 228 aa8.37□□□□□ -1.07
PALB2-206ENST00000568219 TIMM21Q9BVV7 248 aa8.37□□□□□ -1.07
PALB2-206ENST00000568219 BRD3OSQ6XYD6 125 aa8.37□□□□□ -1.07
PALB2-206ENST00000568219 LINC01620Q4KN68 170 aa8.36□□□□□ -1.07
PALB2-206ENST00000568219 KLK9Q9UKQ9 250 aa8.36□□□□□ -1.07
PALB2-206ENST00000568219 CUL9Q8IWT3 2517 aa8.36□□□□□ -1.07
PALB2-206ENST00000568219 CRIP2P52943 208 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms