RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 DEFB131AP59861 70 aa4.55□□□□□ -1.68
CAPN3-218ENST00000568153 HBBP68871 147 aa4.55□□□□□ -1.68
CAPN3-218ENST00000568153 TMEM61Q8N0U2 210 aa4.55□□□□□ -1.68
CAPN3-218ENST00000568153 ZFAND2AQ8N6M9 145 aa4.55□□□□□ -1.68
CAPN3-218ENST00000568153 FER1L6-AS1Q8NA97 138 aa4.55□□□□□ -1.68
CAPN3-218ENST00000568153 OR2K2Q8NGT1 345 aa4.55□□□□□ -1.68
CAPN3-218ENST00000568153 ODF3Q96PU9 254 aa4.55□□□□□ -1.68
CAPN3-218ENST00000568153 TPPP3Q9BW30 176 aa4.55□□□□□ -1.68
CAPN3-218ENST00000568153 ZNF469Q96JG9 3925 aaPredicted RBP4.55□□□□□ -1.68
CAPN3-218ENST00000568153 AKAP9Q99996 3911 aa4.55□□□□□ -1.68
CAPN3-218ENST00000568153 FLNAP21333 2647 aaKnown RBP4.55□□□□□ -1.68
CAPN3-218ENST00000568153 IGKV3D-20A0A0C4DH25 116 aa4.54□□□□□ -1.68
CAPN3-218ENST00000568153 A0A1B0GXF2 115 aa4.54□□□□□ -1.68
CAPN3-218ENST00000568153 KNCNA6PVL3 124 aa4.54□□□□□ -1.68
CAPN3-218ENST00000568153 SAP30O75446 220 aa4.54□□□□□ -1.68
CAPN3-218ENST00000568153 IGKV3-20P01619 116 aa4.54□□□□□ -1.68
CAPN3-218ENST00000568153 TWIST1Q15672 202 aa4.54□□□□□ -1.68
CAPN3-218ENST00000568153 KIAA1644Q3SXP7 199 aa4.54□□□□□ -1.68
CAPN3-218ENST00000568153 GDF5OSQ5U4N7 250 aa4.54□□□□□ -1.68
CAPN3-218ENST00000568153 APRG1Q8IVJ8 170 aa4.54□□□□□ -1.68
CAPN3-218ENST00000568153 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.54□□□□□ -1.68
CAPN3-218ENST00000568153 MPLKIPQ8TAP9 179 aa4.54□□□□□ -1.68
CAPN3-218ENST00000568153 ZNF256Q9Y2P7 627 aaPredicted RBP4.54□□□□□ -1.68
CAPN3-218ENST00000568153 ACANP16112 2415 aa4.54□□□□□ -1.68
CAPN3-218ENST00000568153 DNHD1Q96M86 4753 aa4.53□□□□□ -1.68
CAPN3-218ENST00000568153 NF1P21359 2839 aa4.53□□□□□ -1.68
CAPN3-218ENST00000568153 C7orf71A4D174 169 aa4.53□□□□□ -1.68
CAPN3-218ENST00000568153 KLLNB2CW77 178 aa4.53□□□□□ -1.68
CAPN3-218ENST00000568153 H3BMM0 161 aa4.53□□□□□ -1.68
CAPN3-218ENST00000568153 UBE2CO00762 179 aa4.53□□□□□ -1.68
CAPN3-218ENST00000568153 ZNF324O75467 553 aaPredicted RBP4.53□□□□□ -1.68
CAPN3-218ENST00000568153 ARMS2P0C7Q2 107 aa4.53□□□□□ -1.68
CAPN3-218ENST00000568153 IGLC6P0CF74 106 aa4.53□□□□□ -1.68
CAPN3-218ENST00000568153 NTF3P20783 257 aa4.53□□□□□ -1.68
CAPN3-218ENST00000568153 SSTP61278 116 aa4.53□□□□□ -1.68
CAPN3-218ENST00000568153 Q0VG73 95 aa4.53□□□□□ -1.68
CAPN3-218ENST00000568153 FAM159AQ6UWV7 190 aa4.53□□□□□ -1.68
CAPN3-218ENST00000568153 KCNS1Q96KK3 526 aa4.53□□□□□ -1.68
CAPN3-218ENST00000568153 OTOGQ6ZRI0 2925 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 SONP18583 2426 aaKnown RBP4.52□□□□□ -1.69
CAPN3-218ENST00000568153 A0A0A0MQY5 61 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 TRAV12-3A0A0B4J271 114 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 MUC21A0A0G2JKD1 596 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 MUC21A0A140T8X8 626 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 OR11H12B2RN74 326 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 GNRH2O43555 120 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 IGLV1-51P01701 117 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 OR5AL1P0C617 328 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 HLA-DRB4P13762 266 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 S100A4P26447 101 aaKnown RBP4.52□□□□□ -1.69
CAPN3-218ENST00000568153 S100A2P29034 98 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 CTRLP40313 264 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 ASIPP42127 132 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 CDKN1BP46527 198 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 INSL3P51460 131 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 CACNG7P62955 275 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 ODF3L2Q3SX64 289 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 OR10J3Q5JRS4 329 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 COA6Q5JTJ3 125 aaKnown RBP4.52□□□□□ -1.69
CAPN3-218ENST00000568153 MUC21Q5SSG8 566 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 DNLZQ5SXM8 178 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 PRR9Q5T870 116 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 Q6ZQT7 251 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 ZNF493Q6ZR52 646 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 SMIM15Q7Z3B0 74 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 BAGE3Q86Y29 109 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 GATD1Q8NB37 220 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 CITED1Q99966 193 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 MAP6D1Q9H9H5 199 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 NAGKQ9UJ70 344 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 HLA-DRB4X5D2U9 266 aa4.52□□□□□ -1.69
CAPN3-218ENST00000568153 IGHV4-4A0A075B6R2 117 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 TRAV12-2A0A075B6T6 113 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 IGHV1OR15-1A0A075B7D0 117 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 LOC102724200A0A096LPH7 203 aaPredicted RBP4.51□□□□□ -1.69
CAPN3-218ENST00000568153 IGLV5-39A0A0G2JS06 123 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 A8MTW9 85 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 M0R2Z0 102 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 AMBPP02760 352 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 SRIP30626 198 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 AKR1D1P51857 326 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 NUTF2P61970 127 aaKnown RBP4.51□□□□□ -1.69
CAPN3-218ENST00000568153 SLAQ13239 276 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 SPINK13Q1W4C9 94 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 KRTAP21-3Q3LHN1 58 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 TDRG1Q3Y452 100 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 SPANXN1Q5VSR9 72 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 FAM104BQ5XKR9 115 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 AMTNQ6UX39 209 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 STHQ8IWL8 128 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 FAM110AQ9BQ89 295 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 ALKBH7Q9BT30 221 aaPredicted RBP4.51□□□□□ -1.69
CAPN3-218ENST00000568153 CNFNQ9BYD5 112 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 TMEM191AQ9H0A3 160 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 TIMM8BQ9Y5J9 83 aaPredicted RBP4.51□□□□□ -1.69
CAPN3-218ENST00000568153 TLN2Q9Y4G6 2542 aa4.51□□□□□ -1.69
CAPN3-218ENST00000568153 SNAI2O43623 268 aa4.5□□□□□ -1.69
CAPN3-218ENST00000568153 CD7P09564 240 aa4.5□□□□□ -1.69
CAPN3-218ENST00000568153 FXYD7P58549 80 aa4.5□□□□□ -1.69
CAPN3-218ENST00000568153 C9orf66Q5T8R8 295 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms