RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 OR10J6PQ8NGY7 276 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 RCHY1Q96PM5 261 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 NDFIP1Q9BT67 221 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 TPPP3Q9BW30 176 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 CLEC5AQ9NY25 188 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 MSRB1Q9NZV6 116 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 TENM1Q9UKZ4 2725 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 TRAV12-2A0A075B6T6 113 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 A0A1B0GUT8 65 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 KLLNB2CW77 178 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 M0QZ24 198 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 HLA-DQA1P01909 254 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 APCSP02743 223 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 ORM1P02763 201 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 MT-ND6P03923 174 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 RBMY1A1P0DJD3 496 aaKnown RBP4.22□□□□□ -1.73
SF3B3-210ENST00000567654 RBMY1CP0DJD4 496 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 SRIP30626 198 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 RNASE4P34096 147 aaKnown RBP4.22□□□□□ -1.73
SF3B3-210ENST00000567654 BMI1P35226 326 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 ID1P41134 155 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 AKR1D1P51857 326 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 FXYD7P58549 80 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 DEFB131AP59861 70 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 HBBP68871 147 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 RBMY1FQ15415 496 aaKnown RBP4.22□□□□□ -1.73
SF3B3-210ENST00000567654 WDR73Q6P4I2 378 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 RASL11AQ6T310 242 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 AMTNQ6UX39 209 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 FER1L6-AS1Q8NA97 138 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 DYNLRB2Q8TF09 96 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 URB1-AS1Q96HZ7 61 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 LINC00477Q96M19 166 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 MAP6D1Q9H9H5 199 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 PEMTQ9UBM1 199 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 ZNF256Q9Y2P7 627 aaPredicted RBP4.22□□□□□ -1.73
SF3B3-210ENST00000567654 LENEPQ9Y5L5 61 aa4.22□□□□□ -1.73
SF3B3-210ENST00000567654 NIPBLQ6KC79 2804 aaeCLIP4.22□□□□□ -1.73
SF3B3-210ENST00000567654 H3BVH4 76 aa4.21□□□□□ -1.74
SF3B3-210ENST00000567654 M0R2Z0 102 aa4.21□□□□□ -1.74
SF3B3-210ENST00000567654 SERF1AO75920 110 aa4.21□□□□□ -1.74
SF3B3-210ENST00000567654 GAS8-AS1O95177 125 aa4.21□□□□□ -1.74
SF3B3-210ENST00000567654 AMBPP02760 352 aa4.21□□□□□ -1.74
SF3B3-210ENST00000567654 GPX1P07203 203 aa4.21□□□□□ -1.74
SF3B3-210ENST00000567654 SPINK13Q1W4C9 94 aa4.21□□□□□ -1.74
SF3B3-210ENST00000567654 ODF3L2Q3SX64 289 aa4.21□□□□□ -1.74
SF3B3-210ENST00000567654 ANXA2RQ3ZCQ2 193 aa4.21□□□□□ -1.74
SF3B3-210ENST00000567654 COX19Q49B96 90 aa4.21□□□□□ -1.74
SF3B3-210ENST00000567654 Q6AWC8 147 aa4.21□□□□□ -1.74
SF3B3-210ENST00000567654 OR10AG1Q8NH19 301 aa4.21□□□□□ -1.74
SF3B3-210ENST00000567654 C18orf32Q8TCD1 76 aa4.21□□□□□ -1.74
SF3B3-210ENST00000567654 HIST1H2BLQ99880 126 aa4.21□□□□□ -1.74
SF3B3-210ENST00000567654 ALKBH7Q9BT30 221 aaPredicted RBP4.21□□□□□ -1.74
SF3B3-210ENST00000567654 NAGKQ9UJ70 344 aa4.21□□□□□ -1.74
SF3B3-210ENST00000567654 VWFP04275 2813 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 LOC102724200A0A096LPH7 203 aaPredicted RBP4.2□□□□□ -1.74
SF3B3-210ENST00000567654 TRAV2A0A0B4J234 112 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 TRAV12-3A0A0B4J271 114 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 TRAV21A0A0B4J279 112 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 A8MTW9 85 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 SMKR1H3BMG3 65 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 CRXO43186 299 aaPredicted RBP4.2□□□□□ -1.74
SF3B3-210ENST00000567654 GNRH2O43555 120 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 SNAI2O43623 268 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 ZNF324O75467 553 aaPredicted RBP4.2□□□□□ -1.74
SF3B3-210ENST00000567654 FABP4P15090 132 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 NTF3P20783 257 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 RPS20P60866 119 aaKnown RBP4.2□□□□□ -1.74
SF3B3-210ENST00000567654 SNRPD3P62318 126 aaKnown RBP4.2□□□□□ -1.74
SF3B3-210ENST00000567654 Q0VG73 95 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 RIGQ13278 110 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 SAMD13Q5VXD3 122 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 FOXI2Q6ZQN5 318 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 ZNF493Q6ZR52 646 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 AMN1Q8IY45 258 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 LINC00518Q8N0U6 118 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 OR10D4PQ8NGN7 298 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 RNF185Q96GF1 192 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 ODF3Q96PU9 254 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 CNFNQ9BYD5 112 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 WFDC10AQ9H1F0 79 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 TEP1Q99973 2627 aaKnown RBP4.2□□□□□ -1.74
SF3B3-210ENST00000567654 ANK2Q01484 3957 aa4.2□□□□□ -1.74
SF3B3-210ENST00000567654 TRBV7-9A0A0J9YWB2 115 aa4.19□□□□□ -1.74
SF3B3-210ENST00000567654 C7orf71A4D174 169 aa4.19□□□□□ -1.74
SF3B3-210ENST00000567654 H3BMM0 161 aa4.19□□□□□ -1.74
SF3B3-210ENST00000567654 SAP30O75446 220 aa4.19□□□□□ -1.74
SF3B3-210ENST00000567654 NCR2O95944 276 aa4.19□□□□□ -1.74
SF3B3-210ENST00000567654 IGLV1-51P01701 117 aa4.19□□□□□ -1.74
SF3B3-210ENST00000567654 PRM2P04554 102 aa4.19□□□□□ -1.74
SF3B3-210ENST00000567654 ESDP10768 282 aa4.19□□□□□ -1.74
SF3B3-210ENST00000567654 RNASE3P12724 160 aaKnown RBP4.19□□□□□ -1.74
SF3B3-210ENST00000567654 HLA-DRB4P13762 266 aa4.19□□□□□ -1.74
SF3B3-210ENST00000567654 PAFAH1B2P68402 229 aa4.19□□□□□ -1.74
SF3B3-210ENST00000567654 TWIST1Q15672 202 aa4.19□□□□□ -1.74
SF3B3-210ENST00000567654 MRPL51Q4U2R6 128 aaKnown RBP4.19□□□□□ -1.74
SF3B3-210ENST00000567654 PYY3Q5JQD4 70 aa4.19□□□□□ -1.74
SF3B3-210ENST00000567654 OR10J3Q5JRS4 329 aa4.19□□□□□ -1.74
SF3B3-210ENST00000567654 EBLN2Q6P2I7 272 aa4.19□□□□□ -1.74
SF3B3-210ENST00000567654 NDUFA11Q86Y39 141 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms