RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 ARMS2P0C7Q2 107 aa9.12□□□□□ -0.95
CFDP1-207ENST00000566901 S100A4P26447 101 aaKnown RBP9.12□□□□□ -0.95
CFDP1-207ENST00000566901 KPRPQ5T749 579 aaPredicted RBP9.12□□□□□ -0.95
CFDP1-207ENST00000566901 MRPL54Q6P161 138 aaKnown RBP9.12□□□□□ -0.95
CFDP1-207ENST00000566901 CSTL1Q9H114 145 aa9.12□□□□□ -0.95
CFDP1-207ENST00000566901 GOLT1BQ9Y3E0 138 aa9.12□□□□□ -0.95
CFDP1-207ENST00000566901 LOC102724200A0A096LPH7 203 aaPredicted RBP9.11□□□□□ -0.95
CFDP1-207ENST00000566901 IGHV3-16A0A0C4DH30 117 aa9.11□□□□□ -0.95
CFDP1-207ENST00000566901 A8MZ25 164 aa9.11□□□□□ -0.95
CFDP1-207ENST00000566901 H3BVH4 76 aa9.11□□□□□ -0.95
CFDP1-207ENST00000566901 RNASE3P12724 160 aaKnown RBP9.11□□□□□ -0.95
CFDP1-207ENST00000566901 RPL35AP18077 110 aaKnown RBP9.11□□□□□ -0.95
CFDP1-207ENST00000566901 APOC4P55056 127 aa9.11□□□□□ -0.95
CFDP1-207ENST00000566901 ZNF493Q6ZR52 646 aa9.11□□□□□ -0.95
CFDP1-207ENST00000566901 TMEM136Q6ZRR5 245 aa9.11□□□□□ -0.95
CFDP1-207ENST00000566901 C9orf85Q96MD7 179 aa9.11□□□□□ -0.95
CFDP1-207ENST00000566901 TPPP3Q9BW30 176 aa9.11□□□□□ -0.95
CFDP1-207ENST00000566901 XCL2Q9UBD3 114 aa9.11□□□□□ -0.95
CFDP1-207ENST00000566901 C1orf196B1AJZ1 125 aa9.1□□□□□ -0.95
CFDP1-207ENST00000566901 SNURFLB1AK76 121 aa9.1□□□□□ -0.95
CFDP1-207ENST00000566901 PHOX2AO14813 284 aa9.1□□□□□ -0.95
CFDP1-207ENST00000566901 C1orf158Q8N1D5 194 aa9.1□□□□□ -0.95
CFDP1-207ENST00000566901 CSNK1G2-AS1Q8NCQ2 148 aa9.1□□□□□ -0.95
CFDP1-207ENST00000566901 PTH2Q96A98 100 aa9.1□□□□□ -0.95
CFDP1-207ENST00000566901 CBY3A6NI87 242 aa9.09□□□□□ -0.95
CFDP1-207ENST00000566901 UBE2CO00762 179 aa9.09□□□□□ -0.95
CFDP1-207ENST00000566901 GNRH2O43555 120 aa9.09□□□□□ -0.95
CFDP1-207ENST00000566901 SPINK4O60575 86 aa9.09□□□□□ -0.95
CFDP1-207ENST00000566901 KRTAP10-11P60412 298 aa9.09□□□□□ -0.95
CFDP1-207ENST00000566901 ZNF415Q09FC8 603 aa9.09□□□□□ -0.95
CFDP1-207ENST00000566901 PIK3CD-AS1Q5SR53 167 aa9.09□□□□□ -0.95
CFDP1-207ENST00000566901 ZNF705AQ6ZN79 300 aaPredicted RBP9.09□□□□□ -0.95
CFDP1-207ENST00000566901 ZFP82Q8N141 532 aa9.09□□□□□ -0.95
CFDP1-207ENST00000566901 OR10AG1Q8NH19 301 aa9.09□□□□□ -0.95
CFDP1-207ENST00000566901 LINC01587Q99440 93 aa9.09□□□□□ -0.95
CFDP1-207ENST00000566901 TMEM208Q9BTX3 173 aa9.09□□□□□ -0.95
CFDP1-207ENST00000566901 NDUFAF3Q9BU61 184 aa9.09□□□□□ -0.95
CFDP1-207ENST00000566901 PHLDA3Q9Y5J5 127 aa9.09□□□□□ -0.95
CFDP1-207ENST00000566901 TRAPPC1Q9Y5R8 145 aa9.09□□□□□ -0.95
CFDP1-207ENST00000566901 TRGC2P03986 189 aa9.08□□□□□ -0.96
CFDP1-207ENST00000566901 CAMPP49913 170 aa9.08□□□□□ -0.96
CFDP1-207ENST00000566901 RAB5BP61020 215 aa9.08□□□□□ -0.96
CFDP1-207ENST00000566901 SPANXN1Q5VSR9 72 aa9.08□□□□□ -0.96
CFDP1-207ENST00000566901 SPXQ9BT56 116 aa9.08□□□□□ -0.96
CFDP1-207ENST00000566901 TMEM191AQ9H0A3 160 aa9.08□□□□□ -0.96
CFDP1-207ENST00000566901 MRPL18Q9H0U6 180 aaKnown RBP9.08□□□□□ -0.96
CFDP1-207ENST00000566901 FRMD6-AS1P0C7T7 363 aa9.07□□□□□ -0.96
CFDP1-207ENST00000566901 TRGC1P0CF51 173 aa9.07□□□□□ -0.96
CFDP1-207ENST00000566901 IGHV4-30-4P0DP06 118 aa9.07□□□□□ -0.96
CFDP1-207ENST00000566901 NTF3P20783 257 aa9.07□□□□□ -0.96
CFDP1-207ENST00000566901 TWIST1Q15672 202 aa9.07□□□□□ -0.96
CFDP1-207ENST00000566901 SYT8Q8NBV8 401 aa9.07□□□□□ -0.96
CFDP1-207ENST00000566901 IL17DQ8TAD2 202 aa9.07□□□□□ -0.96
CFDP1-207ENST00000566901 TMEM263Q8WUH6 116 aaKnown RBP9.07□□□□□ -0.96
CFDP1-207ENST00000566901 APCSP02743 223 aa9.06□□□□□ -0.96
CFDP1-207ENST00000566901 RAB4BP61018 213 aa9.06□□□□□ -0.96
CFDP1-207ENST00000566901 FABP9Q0Z7S8 132 aa9.06□□□□□ -0.96
CFDP1-207ENST00000566901 DEFB121Q5J5C9 76 aa9.06□□□□□ -0.96
CFDP1-207ENST00000566901 SMIM15Q7Z3B0 74 aa9.06□□□□□ -0.96
CFDP1-207ENST00000566901 C11orf72Q8NBR9 251 aa9.06□□□□□ -0.96
CFDP1-207ENST00000566901 RNASE8Q8TDE3 154 aaKnown RBP9.06□□□□□ -0.96
CFDP1-207ENST00000566901 FRZBQ92765 325 aa9.06□□□□□ -0.96
CFDP1-207ENST00000566901 AP1S3Q96PC3 154 aa9.06□□□□□ -0.96
CFDP1-207ENST00000566901 MDFICQ9P1T7 246 aa9.06□□□□□ -0.96
CFDP1-207ENST00000566901 LOC100996750A0A140TA64 210 aa9.05□□□□□ -0.96
CFDP1-207ENST00000566901 SMIM9A6NGZ8 99 aa9.05□□□□□ -0.96
CFDP1-207ENST00000566901 SLAQ13239 276 aa9.05□□□□□ -0.96
CFDP1-207ENST00000566901 FAM104BQ5XKR9 115 aa9.05□□□□□ -0.96
CFDP1-207ENST00000566901 C16orf74Q96GX8 76 aa9.05□□□□□ -0.96
CFDP1-207ENST00000566901 KRTAP4-6Q9BYQ5 205 aa9.05□□□□□ -0.96
CFDP1-207ENST00000566901 M0R2P5 195 aa9.04□□□□□ -0.96
CFDP1-207ENST00000566901 Q6ZWC4 215 aa9.04□□□□□ -0.96
CFDP1-207ENST00000566901 TENM3Q9P273 2699 aa9.04□□□□□ -0.96
CFDP1-207ENST00000566901 MUC21A0A0G2JKD1 596 aa9.03□□□□□ -0.96
CFDP1-207ENST00000566901 MUC21A0A140T8X8 626 aa9.03□□□□□ -0.96
CFDP1-207ENST00000566901 M0R381 172 aa9.03□□□□□ -0.96
CFDP1-207ENST00000566901 HIST1H2BKO60814 126 aa9.03□□□□□ -0.96
CFDP1-207ENST00000566901 HIST1H2BJP06899 126 aa9.03□□□□□ -0.96
CFDP1-207ENST00000566901 HIST1H2BOP23527 126 aa9.03□□□□□ -0.96
CFDP1-207ENST00000566901 HIST1H2BBP33778 126 aa9.03□□□□□ -0.96
CFDP1-207ENST00000566901 HIST1H2BDP58876 126 aa9.03□□□□□ -0.96
CFDP1-207ENST00000566901 HIST1H2BCP62807 126 aa9.03□□□□□ -0.96
CFDP1-207ENST00000566901 DAZ2Q13117 558 aaKnown RBP9.03□□□□□ -0.96
CFDP1-207ENST00000566901 HIST2H2BEQ16778 126 aa9.03□□□□□ -0.96
CFDP1-207ENST00000566901 RRN3P1Q2M238 152 aa9.03□□□□□ -0.96
CFDP1-207ENST00000566901 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.03□□□□□ -0.96
CFDP1-207ENST00000566901 HIST1H2BHQ93079 126 aa9.03□□□□□ -0.96
CFDP1-207ENST00000566901 RCHY1Q96PM5 261 aa9.03□□□□□ -0.96
CFDP1-207ENST00000566901 HIST1H2BNQ99877 126 aa9.03□□□□□ -0.96
CFDP1-207ENST00000566901 HIST1H2BMQ99879 126 aa9.03□□□□□ -0.96
CFDP1-207ENST00000566901 DPH3P1Q9H4G8 78 aa9.03□□□□□ -0.96
CFDP1-207ENST00000566901 MSRB1Q9NZV6 116 aa9.03□□□□□ -0.96
CFDP1-207ENST00000566901 TP53TG1Q9Y2A0 90 aa9.03□□□□□ -0.96
CFDP1-207ENST00000566901 TIMM8BQ9Y5J9 83 aaPredicted RBP9.03□□□□□ -0.96
CFDP1-207ENST00000566901 IGHV3OR16-12A0A075B7B8 117 aa9.02□□□□□ -0.97
CFDP1-207ENST00000566901 K7EIL1 84 aa9.02□□□□□ -0.97
CFDP1-207ENST00000566901 SPRY2O43597 315 aa9.02□□□□□ -0.97
CFDP1-207ENST00000566901 PPBPP02775 128 aa9.02□□□□□ -0.97
CFDP1-207ENST00000566901 LGALS9BQ3B8N2 356 aa9.02□□□□□ -0.97
CFDP1-207ENST00000566901 POM121L12Q8N7R1 296 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms