RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 IGKCP01834 107 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 PYYP10082 97 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 MRPS36P82909 103 aaKnown RBP2.66□□□□□ -1.98
CHD9-213ENST00000564845 ERCC8Q13216 396 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 ZNF329Q86UD4 541 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 NAV3Q8IVL0 2385 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 IGLV3-9A0A075B6K5 115 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 TRAV8-1A0A0A6YYK1 113 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 LOC105371267A0A1B0GV96 52 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 IGHV1-8P0DP01 117 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 ZNF137PP52743 207 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 NMSQ5H8A3 153 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 MRPL55Q7Z7F7 128 aaKnown RBP2.66□□□□□ -1.98
CHD9-213ENST00000564845 C15orf53Q8NAA6 179 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 JPT2Q9H910 190 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 SPG11Q96JI7 2443 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 TRAV8-3A0A0A6YYJ7 113 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 IGHV1-3A0A0C4DH29 117 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 TRBV6-1A0A0K0K1D8 114 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 C7orf77A4D0Y5 90 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 PRSS46E5RG02 174 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 K7ENP7 123 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 HOXB4P17483 251 aaPredicted RBP2.66□□□□□ -1.98
CHD9-213ENST00000564845 NDPQ00604 133 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 VMO1Q7Z5L0 202 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 FAM110DQ8TAY7 271 aaPredicted RBP2.66□□□□□ -1.98
CHD9-213ENST00000564845 PEX7O00628 323 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 SAP30O75446 220 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 EIF4EBP1Q13541 118 aaPredicted RBP2.66□□□□□ -1.98
CHD9-213ENST00000564845 TMEM170AQ8WVE7 144 aa2.66□□□□□ -1.98
CHD9-213ENST00000564845 OVOL3O00110 214 aa2.65□□□□□ -1.98
CHD9-213ENST00000564845 SOCS3O14543 225 aa2.65□□□□□ -1.98
CHD9-213ENST00000564845 SPATA45Q537H7 98 aa2.65□□□□□ -1.98
CHD9-213ENST00000564845 UNQ6494/PRO21346Q6UXR6 183 aa2.65□□□□□ -1.98
CHD9-213ENST00000564845 TRAV4A0A0B4J268 109 aa2.65□□□□□ -1.98
CHD9-213ENST00000564845 K7ERS5 55 aa2.65□□□□□ -1.98
CHD9-213ENST00000564845 CD5LO43866 347 aa2.65□□□□□ -1.98
CHD9-213ENST00000564845 C11orf42Q8N5U0 333 aa2.65□□□□□ -1.98
CHD9-213ENST00000564845 VSIG2Q96IQ7 327 aa2.65□□□□□ -1.98
CHD9-213ENST00000564845 ZNF747Q9BV97 191 aa2.65□□□□□ -1.98
CHD9-213ENST00000564845 TRAV12-1A0A0B4J245 112 aa2.65□□□□□ -1.98
CHD9-213ENST00000564845 HIGD1CA8MV81 97 aa2.65□□□□□ -1.98
CHD9-213ENST00000564845 BUB1B-PAK6H3BSN5 160 aa2.65□□□□□ -1.98
CHD9-213ENST00000564845 TMEM256-PLSCR3K7ERE1 68 aa2.65□□□□□ -1.98
CHD9-213ENST00000564845 C17orf58Q2M2W7 97 aa2.65□□□□□ -1.98
CHD9-213ENST00000564845 IGKV1OR2-108A0A075B7D4 117 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 C18orf12Q96KH6 178 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 TMEM126AQ9H061 195 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 TET2Q6N021 2002 aaPredicted RBP2.65□□□□□ -1.99
CHD9-213ENST00000564845 LGALS9O00182 355 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 ID3Q02535 119 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 KRTAP27-1Q3LI81 207 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 Q8N7P7 452 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 MRPL20Q9BYC9 149 aaKnown RBP2.65□□□□□ -1.99
CHD9-213ENST00000564845 TMEM213A2RRL7 107 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 TDGF1P3P51864 188 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 ECSCRQ19T08 205 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 C7orf69Q9H7B7 122 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 TMSB15BA0A087X1C1 80 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 DLEU1O43261 78 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 MSMBP08118 114 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 RND2P52198 227 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 PRR15LQ9BU68 103 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 NKAPP1Q8N9T2 125 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 PSMG3-AS1Q96PY0 264 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 LINC00574Q9H8X3 128 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 C16orf74Q96GX8 76 aa2.65□□□□□ -1.99
CHD9-213ENST00000564845 SCO2A0A1W2PP80 73 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 ZFP36P26651 326 aaKnown RBP2.64□□□□□ -1.99
CHD9-213ENST00000564845 TMEM170BQ5T4T1 132 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 ZNF833PQ6ZTB9 187 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 GATD1Q8NB37 220 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 IGHV2-26A0A0B4J1V2 119 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 TMEM14EPQ6UXP3 125 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 RPP25LQ8N5L8 163 aaKnown RBP2.64□□□□□ -1.99
CHD9-213ENST00000564845 ZNF462Q96JM2 2506 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 IGKV3-20P01619 116 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 IGHV1-69P01742 117 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 SRP19P09132 144 aaKnown RBP2.64□□□□□ -1.99
CHD9-213ENST00000564845 CR1LQ2VPA4 569 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 COA6Q5JTJ3 125 aaKnown RBP2.64□□□□□ -1.99
CHD9-213ENST00000564845 RNASE7Q9H1E1 156 aaKnown RBP2.64□□□□□ -1.99
CHD9-213ENST00000564845 COL7A1Q02388 2944 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 SDHAF1A6NFY7 115 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 ADARB2-AS1A8MUL3 147 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 IGHV3-11P01762 117 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 SAA1P0DJI8 122 aaPredicted RBP2.64□□□□□ -1.99
CHD9-213ENST00000564845 UBE2AP49459 152 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 SEC61GP60059 68 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 LYPD6BQ8NI32 183 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 PRO1933Q9H354 126 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 PSCAO43653 123 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 NDUFC2O95298 119 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 GAGE13Q4V321 117 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 ZFAND6Q6FIF0 208 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 SPATA12Q7Z6I5 190 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 GGTLC1Q9BX51 225 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 HTN1P15515 57 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 MIR17HGQ75NE6 70 aa2.64□□□□□ -1.99
CHD9-213ENST00000564845 WFDC3Q8IUB2 231 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms