RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 KNCNA6PVL3 124 aa6.06□□□□□ -1.44
SMG1-209ENST00000563836 C1orf196B1AJZ1 125 aa6.06□□□□□ -1.44
SMG1-209ENST00000563836 F2Z2F3 143 aa6.06□□□□□ -1.44
SMG1-209ENST00000563836 MT-ND6P03923 174 aa6.06□□□□□ -1.44
SMG1-209ENST00000563836 ASIPP42127 132 aa6.06□□□□□ -1.44
SMG1-209ENST00000563836 TCL1AP56279 114 aa6.06□□□□□ -1.44
SMG1-209ENST00000563836 RAB5BP61020 215 aa6.06□□□□□ -1.44
SMG1-209ENST00000563836 ELOBQ15370 118 aa6.06□□□□□ -1.44
SMG1-209ENST00000563836 ODF3L2Q3SX64 289 aa6.06□□□□□ -1.44
SMG1-209ENST00000563836 LCE1AQ5T7P2 110 aa6.06□□□□□ -1.44
SMG1-209ENST00000563836 MORN3Q6PF18 240 aaPredicted RBP6.06□□□□□ -1.44
SMG1-209ENST00000563836 ATP5L2Q7Z4Y8 100 aa6.06□□□□□ -1.44
SMG1-209ENST00000563836 APRG1Q8IVJ8 170 aa6.06□□□□□ -1.44
SMG1-209ENST00000563836 C20orf144Q9BQM9 153 aa6.06□□□□□ -1.44
SMG1-209ENST00000563836 ZNF256Q9Y2P7 627 aaPredicted RBP6.06□□□□□ -1.44
SMG1-209ENST00000563836 TRBV24-1A0A075B6N3 115 aa6.05□□□□□ -1.44
SMG1-209ENST00000563836 TMSB15BA0A087X1C1 80 aa6.05□□□□□ -1.44
SMG1-209ENST00000563836 SMIM27A0A1W2PRY6 76 aa6.05□□□□□ -1.44
SMG1-209ENST00000563836 HIGD1CA8MV81 97 aa6.05□□□□□ -1.44
SMG1-209ENST00000563836 H3BMM0 161 aa6.05□□□□□ -1.44
SMG1-209ENST00000563836 CXCL1P09341 107 aa6.05□□□□□ -1.44
SMG1-209ENST00000563836 PRB4P10163 310 aaPredicted RBP6.05□□□□□ -1.44
SMG1-209ENST00000563836 RAB5AP20339 215 aa6.05□□□□□ -1.44
SMG1-209ENST00000563836 CACNG7P62955 275 aa6.05□□□□□ -1.44
SMG1-209ENST00000563836 SPINK13Q1W4C9 94 aa6.05□□□□□ -1.44
SMG1-209ENST00000563836 RASL11AQ6T310 242 aa6.05□□□□□ -1.44
SMG1-209ENST00000563836 TMEM256Q8N2U0 113 aa6.05□□□□□ -1.44
SMG1-209ENST00000563836 FER1L6-AS1Q8NA97 138 aa6.05□□□□□ -1.44
SMG1-209ENST00000563836 WFDC9Q8NEX5 89 aa6.05□□□□□ -1.44
SMG1-209ENST00000563836 FRZBQ92765 325 aa6.05□□□□□ -1.44
SMG1-209ENST00000563836 GOLT1BQ9Y3E0 138 aa6.05□□□□□ -1.44
SMG1-209ENST00000563836 TRAPPC1Q9Y5R8 145 aa6.05□□□□□ -1.44
SMG1-209ENST00000563836 TGIF2-C20orf24A0A0A6YYL0 155 aa6.04□□□□□ -1.44
SMG1-209ENST00000563836 TRAV12-3A0A0B4J271 114 aa6.04□□□□□ -1.44
SMG1-209ENST00000563836 A0A1B0GUT8 65 aa6.04□□□□□ -1.44
SMG1-209ENST00000563836 KLLNB2CW77 178 aa6.04□□□□□ -1.44
SMG1-209ENST00000563836 CA1P00915 261 aaPredicted RBP6.04□□□□□ -1.44
SMG1-209ENST00000563836 HLA-DQA1P01909 254 aa6.04□□□□□ -1.44
SMG1-209ENST00000563836 IGLL1P15814 213 aa6.04□□□□□ -1.44
SMG1-209ENST00000563836 APOC4P55056 127 aa6.04□□□□□ -1.44
SMG1-209ENST00000563836 HBBP68871 147 aa6.04□□□□□ -1.44
SMG1-209ENST00000563836 GDF5OSQ5U4N7 250 aa6.04□□□□□ -1.44
SMG1-209ENST00000563836 SPANXN1Q5VSR9 72 aa6.04□□□□□ -1.44
SMG1-209ENST00000563836 PGLYRP4Q96LB8 373 aa6.04□□□□□ -1.44
SMG1-209ENST00000563836 LINC01587Q99440 93 aa6.04□□□□□ -1.44
SMG1-209ENST00000563836 SRD5A3Q9H8P0 318 aa6.04□□□□□ -1.44
SMG1-209ENST00000563836 PHLDA3Q9Y5J5 127 aa6.04□□□□□ -1.44
SMG1-209ENST00000563836 ANK3Q12955 4377 aaKnown RBP6.04□□□□□ -1.44
SMG1-209ENST00000563836 IGHV1OR15-1A0A075B7D0 117 aa6.03□□□□□ -1.44
SMG1-209ENST00000563836 CBY3A6NI87 242 aa6.03□□□□□ -1.44
SMG1-209ENST00000563836 COLCA2A8K830 154 aa6.03□□□□□ -1.44
SMG1-209ENST00000563836 SNURFLB1AK76 121 aa6.03□□□□□ -1.44
SMG1-209ENST00000563836 M0R2Z0 102 aa6.03□□□□□ -1.44
SMG1-209ENST00000563836 SPINK4O60575 86 aa6.03□□□□□ -1.44
SMG1-209ENST00000563836 CD7P09564 240 aa6.03□□□□□ -1.44
SMG1-209ENST00000563836 SMIM17P0DL12 118 aa6.03□□□□□ -1.44
SMG1-209ENST00000563836 RIPPLY3P57055 190 aa6.03□□□□□ -1.44
SMG1-209ENST00000563836 DEFB1P60022 68 aa6.03□□□□□ -1.44
SMG1-209ENST00000563836 MRPL54Q6P161 138 aaKnown RBP6.03□□□□□ -1.44
SMG1-209ENST00000563836 ZFAND2AQ8N6M9 145 aa6.03□□□□□ -1.44
SMG1-209ENST00000563836 NUP35Q8NFH5 326 aa6.03□□□□□ -1.44
SMG1-209ENST00000563836 FAM19A4Q96LR4 140 aa6.03□□□□□ -1.44
SMG1-209ENST00000563836 PYGO2Q9BRQ0 406 aa6.03□□□□□ -1.44
SMG1-209ENST00000563836 TIMM8BQ9Y5J9 83 aaPredicted RBP6.03□□□□□ -1.44
SMG1-209ENST00000563836 SETXQ7Z333 2677 aaKnown RBP6.03□□□□□ -1.44
SMG1-209ENST00000563836 TRAV12-2A0A075B6T6 113 aa6.02□□□□□ -1.45
SMG1-209ENST00000563836 LOC102724200A0A096LPH7 203 aaPredicted RBP6.02□□□□□ -1.45
SMG1-209ENST00000563836 GRIFINA4D1Z8 144 aa6.02□□□□□ -1.45
SMG1-209ENST00000563836 TYMSP04818 313 aa6.02□□□□□ -1.45
SMG1-209ENST00000563836 TRGC1P0CF51 173 aa6.02□□□□□ -1.45
SMG1-209ENST00000563836 HTN1P15515 57 aa6.02□□□□□ -1.45
SMG1-209ENST00000563836 RPL35AP18077 110 aaKnown RBP6.02□□□□□ -1.45
SMG1-209ENST00000563836 CAMPP49913 170 aa6.02□□□□□ -1.45
SMG1-209ENST00000563836 CRIP1P50238 77 aa6.02□□□□□ -1.45
SMG1-209ENST00000563836 ZNF80P51504 273 aaPredicted RBP6.02□□□□□ -1.45
SMG1-209ENST00000563836 FOXA3P55318 350 aaPredicted RBP6.02□□□□□ -1.45
SMG1-209ENST00000563836 FXYD7P58549 80 aa6.02□□□□□ -1.45
SMG1-209ENST00000563836 ZNF415Q09FC8 603 aa6.02□□□□□ -1.45
SMG1-209ENST00000563836 FABP9Q0Z7S8 132 aa6.02□□□□□ -1.45
SMG1-209ENST00000563836 MUC21Q5SSG8 566 aa6.02□□□□□ -1.45
SMG1-209ENST00000563836 GFI1BQ5VTD9 330 aa6.02□□□□□ -1.45
SMG1-209ENST00000563836 LINC00322Q6ZN03 302 aaPredicted RBP6.02□□□□□ -1.45
SMG1-209ENST00000563836 GNB1LQ9BYB4 327 aa6.02□□□□□ -1.45
SMG1-209ENST00000563836 IGHV3OR16-12A0A075B7B8 117 aa6.01□□□□□ -1.45
SMG1-209ENST00000563836 GZMBP10144 247 aa6.01□□□□□ -1.45
SMG1-209ENST00000563836 LYZL1Q6UWQ5 148 aa6.01□□□□□ -1.45
SMG1-209ENST00000563836 TRPT1Q86TN4 253 aaKnown RBP6.01□□□□□ -1.45
SMG1-209ENST00000563836 ZFP82Q8N141 532 aa6.01□□□□□ -1.45
SMG1-209ENST00000563836 CSTL1Q9H114 145 aa6.01□□□□□ -1.45
SMG1-209ENST00000563836 XCL2Q9UBD3 114 aa6.01□□□□□ -1.45
SMG1-209ENST00000563836 A8MTW9 85 aa6□□□□□ -1.45
SMG1-209ENST00000563836 H3BVH4 76 aa6□□□□□ -1.45
SMG1-209ENST00000563836 APCSP02743 223 aa6□□□□□ -1.45
SMG1-209ENST00000563836 OR5AL1P0C617 328 aa6□□□□□ -1.45
SMG1-209ENST00000563836 ARMS2P0C7Q2 107 aa6□□□□□ -1.45
SMG1-209ENST00000563836 DEFB125Q8N687 156 aa6□□□□□ -1.45
SMG1-209ENST00000563836 JMJD1CQ15652 2540 aa6□□□□□ -1.45
SMG1-209ENST00000563836 SORL1Q92673 2214 aa5.99□□□□□ -1.45
SMG1-209ENST00000563836 IGKV3D-20A0A0C4DH25 116 aa5.99□□□□□ -1.45
SMG1-209ENST00000563836 KIR2DL5BA0A0G2JN68 375 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms