RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 PRR9Q5T870 116 aa10.26□□□□□ -0.77
SMPD3-205ENST00000563455 GFI1BQ5VTD9 330 aa10.26□□□□□ -0.77
SMPD3-205ENST00000563455 STHQ8IWL8 128 aa10.26□□□□□ -0.77
SMPD3-205ENST00000563455 C1QTNF4Q9BXJ3 329 aa10.26□□□□□ -0.77
SMPD3-205ENST00000563455 NAGKQ9UJ70 344 aa10.26□□□□□ -0.77
SMPD3-205ENST00000563455 NOTCH1P46531 2555 aa10.25□□□□□ -0.77
SMPD3-205ENST00000563455 TRAV12-3A0A0B4J271 114 aa10.25□□□□□ -0.77
SMPD3-205ENST00000563455 NXPH4O95158 308 aa10.25□□□□□ -0.77
SMPD3-205ENST00000563455 FABP4P15090 132 aa10.25□□□□□ -0.77
SMPD3-205ENST00000563455 CKS2P33552 79 aa10.25□□□□□ -0.77
SMPD3-205ENST00000563455 KIAA1644Q3SXP7 199 aa10.25□□□□□ -0.77
SMPD3-205ENST00000563455 SAMD5Q5TGI4 173 aa10.25□□□□□ -0.77
SMPD3-205ENST00000563455 PTH2Q96A98 100 aa10.25□□□□□ -0.77
SMPD3-205ENST00000563455 MRAP2Q96G30 205 aa10.25□□□□□ -0.77
SMPD3-205ENST00000563455 TGP01266 2768 aa10.25□□□□□ -0.77
SMPD3-205ENST00000563455 WNK1Q9H4A3 2382 aa10.24□□□□□ -0.77
SMPD3-205ENST00000563455 G3V4G9 280 aa10.24□□□□□ -0.77
SMPD3-205ENST00000563455 HSBP1O75506 76 aa10.24□□□□□ -0.77
SMPD3-205ENST00000563455 SERF1AO75920 110 aa10.24□□□□□ -0.77
SMPD3-205ENST00000563455 INSP01308 110 aa10.24□□□□□ -0.77
SMPD3-205ENST00000563455 CD7P09564 240 aa10.24□□□□□ -0.77
SMPD3-205ENST00000563455 MORN3Q6PF18 240 aaPredicted RBP10.24□□□□□ -0.77
SMPD3-205ENST00000563455 LINC00518Q8N0U6 118 aa10.24□□□□□ -0.77
SMPD3-205ENST00000563455 AP1S3Q96PC3 154 aa10.24□□□□□ -0.77
SMPD3-205ENST00000563455 SAMD10Q9BYL1 202 aa10.24□□□□□ -0.77
SMPD3-205ENST00000563455 H3BVH4 76 aa10.23□□□□□ -0.77
SMPD3-205ENST00000563455 J3KRW8 73 aa10.23□□□□□ -0.77
SMPD3-205ENST00000563455 PRB4P10163 310 aaPredicted RBP10.23□□□□□ -0.77
SMPD3-205ENST00000563455 DEFB1P60022 68 aa10.23□□□□□ -0.77
SMPD3-205ENST00000563455 SPINK13Q1W4C9 94 aa10.23□□□□□ -0.77
SMPD3-205ENST00000563455 ODF3L2Q3SX64 289 aa10.23□□□□□ -0.77
SMPD3-205ENST00000563455 DEFB125Q8N687 156 aa10.23□□□□□ -0.77
SMPD3-205ENST00000563455 PRELID3AQ96N28 172 aa10.23□□□□□ -0.77
SMPD3-205ENST00000563455 DPH3P1Q9H4G8 78 aa10.23□□□□□ -0.77
SMPD3-205ENST00000563455 ZMAT5Q9UDW3 170 aaKnown RBP10.23□□□□□ -0.77
SMPD3-205ENST00000563455 LINC00614P0C842 121 aa10.22□□□□□ -0.77
SMPD3-205ENST00000563455 SMIM17P0DL12 118 aa10.22□□□□□ -0.77
SMPD3-205ENST00000563455 WFDC9Q8NEX5 89 aa10.22□□□□□ -0.77
SMPD3-205ENST00000563455 OR10D4PQ8NGN7 298 aa10.22□□□□□ -0.77
SMPD3-205ENST00000563455 OR10AG1Q8NH19 301 aa10.22□□□□□ -0.77
SMPD3-205ENST00000563455 SPXQ9BT56 116 aa10.22□□□□□ -0.77
SMPD3-205ENST00000563455 GSN-AS1Q9NRJ2 163 aa10.22□□□□□ -0.77
SMPD3-205ENST00000563455 KNCNA6PVL3 124 aa10.21□□□□□ -0.77
SMPD3-205ENST00000563455 PRSS47A8MTI9 375 aa10.21□□□□□ -0.77
SMPD3-205ENST00000563455 K7EMI3 77 aa10.21□□□□□ -0.77
SMPD3-205ENST00000563455 M0R2Z0 102 aa10.21□□□□□ -0.77
SMPD3-205ENST00000563455 MRPL51Q4U2R6 128 aaKnown RBP10.21□□□□□ -0.77
SMPD3-205ENST00000563455 MUC21Q5SSG8 566 aa10.21□□□□□ -0.77
SMPD3-205ENST00000563455 TRPT1Q86TN4 253 aaKnown RBP10.21□□□□□ -0.77
SMPD3-205ENST00000563455 GTSCR1Q86UQ5 136 aa10.21□□□□□ -0.77
SMPD3-205ENST00000563455 NIT1Q86X76 327 aa10.21□□□□□ -0.77
SMPD3-205ENST00000563455 AMN1Q8IY45 258 aa10.21□□□□□ -0.77
SMPD3-205ENST00000563455 PRSS3P2Q8NHM4 247 aa10.21□□□□□ -0.77
SMPD3-205ENST00000563455 C9orf85Q96MD7 179 aa10.21□□□□□ -0.77
SMPD3-205ENST00000563455 NXT2Q9NPJ8 142 aaKnown RBP10.21□□□□□ -0.77
SMPD3-205ENST00000563455 IGHV3-16A0A0C4DH30 117 aa10.2□□□□□ -0.78
SMPD3-205ENST00000563455 IFITM10A6NMD0 228 aa10.2□□□□□ -0.78
SMPD3-205ENST00000563455 D6R8Y8 96 aa10.2□□□□□ -0.78
SMPD3-205ENST00000563455 M0R381 172 aa10.2□□□□□ -0.78
SMPD3-205ENST00000563455 GNRH2O43555 120 aa10.2□□□□□ -0.78
SMPD3-205ENST00000563455 IGKV3-20P01619 116 aa10.2□□□□□ -0.78
SMPD3-205ENST00000563455 RNASE3P12724 160 aaKnown RBP10.2□□□□□ -0.78
SMPD3-205ENST00000563455 PDZD11Q5EBL8 140 aa10.2□□□□□ -0.78
SMPD3-205ENST00000563455 POM121L12Q8N7R1 296 aa10.2□□□□□ -0.78
SMPD3-205ENST00000563455 MRAPQ8TCY5 172 aa10.2□□□□□ -0.78
SMPD3-205ENST00000563455 MAP1LC3AQ9H492 121 aa10.2□□□□□ -0.78
SMPD3-205ENST00000563455 AP5S1Q9NUS5 200 aa10.2□□□□□ -0.78
SMPD3-205ENST00000563455 SELENOKQ9Y6D0 94 aa10.2□□□□□ -0.78
SMPD3-205ENST00000563455 CBY3A6NI87 242 aa10.19□□□□□ -0.78
SMPD3-205ENST00000563455 LINC01549A6NIU2 74 aa10.19□□□□□ -0.78
SMPD3-205ENST00000563455 CRXO43186 299 aaPredicted RBP10.19□□□□□ -0.78
SMPD3-205ENST00000563455 G0S2P27469 103 aa10.19□□□□□ -0.78
SMPD3-205ENST00000563455 AMTP48728 403 aa10.19□□□□□ -0.78
SMPD3-205ENST00000563455 ZNF415Q09FC8 603 aa10.19□□□□□ -0.78
SMPD3-205ENST00000563455 JOSD1Q15040 202 aaPredicted RBP10.19□□□□□ -0.78
SMPD3-205ENST00000563455 IQCJQ1A5X6 159 aa10.19□□□□□ -0.78
SMPD3-205ENST00000563455 FA2HQ7L5A8 372 aa10.19□□□□□ -0.78
SMPD3-205ENST00000563455 Q8N1Y9 231 aa10.19□□□□□ -0.78
SMPD3-205ENST00000563455 C12orf57Q99622 126 aa10.19□□□□□ -0.78
SMPD3-205ENST00000563455 TRAV12-2A0A075B6T6 113 aa10.18□□□□□ -0.78
SMPD3-205ENST00000563455 KIR3DS1Q14943 382 aa10.18□□□□□ -0.78
SMPD3-205ENST00000563455 OXLD1Q5BKU9 147 aa10.18□□□□□ -0.78
SMPD3-205ENST00000563455 RNF185Q96GF1 192 aa10.18□□□□□ -0.78
SMPD3-205ENST00000563455 C20orf78Q9BR46 151 aa10.18□□□□□ -0.78
SMPD3-205ENST00000563455 MSRB1Q9NZV6 116 aa10.18□□□□□ -0.78
SMPD3-205ENST00000563455 CMYA5Q8N3K9 4069 aa10.18□□□□□ -0.78
SMPD3-205ENST00000563455 EVI2AP22794 236 aa10.17□□□□□ -0.78
SMPD3-205ENST00000563455 RNASEKQ6P5S7 137 aaKnown RBP10.17□□□□□ -0.78
SMPD3-205ENST00000563455 LINC01587Q99440 93 aa10.17□□□□□ -0.78
SMPD3-205ENST00000563455 HSPB8Q9UJY1 196 aa10.17□□□□□ -0.78
SMPD3-205ENST00000563455 GOLT1BQ9Y3E0 138 aa10.17□□□□□ -0.78
SMPD3-205ENST00000563455 LINC01546A6NGU7 62 aa10.16□□□□□ -0.78
SMPD3-205ENST00000563455 A8MWV9 139 aa10.16□□□□□ -0.78
SMPD3-205ENST00000563455 M0R2P5 195 aa10.16□□□□□ -0.78
SMPD3-205ENST00000563455 LINC00310P59036 64 aa10.16□□□□□ -0.78
SMPD3-205ENST00000563455 RPL32P62910 135 aaKnown RBP10.16□□□□□ -0.78
SMPD3-205ENST00000563455 S100A12P80511 92 aa10.16□□□□□ -0.78
SMPD3-205ENST00000563455 TMEM208Q9BTX3 173 aa10.16□□□□□ -0.78
SMPD3-205ENST00000563455 MUC21A0A0G2JKD1 596 aa10.15□□□□□ -0.78
SMPD3-205ENST00000563455 MUC21A0A140T8X8 626 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms