RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 Q8N1Y9 231 aa10.45□□□□□ -0.74
COMMD4-205ENST00000562310 DEFB125Q8N687 156 aa10.45□□□□□ -0.74
COMMD4-205ENST00000562310 C9orf85Q96MD7 179 aa10.45□□□□□ -0.74
COMMD4-205ENST00000562310 TMEM191AQ9H0A3 160 aa10.45□□□□□ -0.74
COMMD4-205ENST00000562310 XCL2Q9UBD3 114 aa10.45□□□□□ -0.74
COMMD4-205ENST00000562310 GOLT1BQ9Y3E0 138 aa10.45□□□□□ -0.74
COMMD4-205ENST00000562310 NBEAL1Q6ZS30 2694 aa10.44□□□□□ -0.74
COMMD4-205ENST00000562310 RPL35AP18077 110 aaKnown RBP10.44□□□□□ -0.74
COMMD4-205ENST00000562310 ZNF415Q09FC8 603 aa10.44□□□□□ -0.74
COMMD4-205ENST00000562310 SLAQ13239 276 aa10.44□□□□□ -0.74
COMMD4-205ENST00000562310 LINC01587Q99440 93 aa10.44□□□□□ -0.74
COMMD4-205ENST00000562310 TMEM208Q9BTX3 173 aa10.44□□□□□ -0.74
COMMD4-205ENST00000562310 TIMM8BQ9Y5J9 83 aaPredicted RBP10.44□□□□□ -0.74
COMMD4-205ENST00000562310 FBN1P35555 2871 aaKnown RBP10.44□□□□□ -0.74
COMMD4-205ENST00000562310 COL6A5A8TX70 2615 aa10.43□□□□□ -0.74
COMMD4-205ENST00000562310 LOC102724200A0A096LPH7 203 aaPredicted RBP10.43□□□□□ -0.74
COMMD4-205ENST00000562310 MUC21A0A0G2JKD1 596 aa10.43□□□□□ -0.74
COMMD4-205ENST00000562310 MUC21A0A140T8X8 626 aa10.43□□□□□ -0.74
COMMD4-205ENST00000562310 DMRTA1Q5VZB9 504 aa10.43□□□□□ -0.74
COMMD4-205ENST00000562310 SYT8Q8NBV8 401 aa10.43□□□□□ -0.74
COMMD4-205ENST00000562310 TP53TG3Q9ULZ0 132 aa10.43□□□□□ -0.74
COMMD4-205ENST00000562310 EGFEM1PQ0D2K5 195 aa10.42□□□□□ -0.74
COMMD4-205ENST00000562310 FAM104BQ5XKR9 115 aa10.42□□□□□ -0.74
COMMD4-205ENST00000562310 AP1S3Q96PC3 154 aa10.42□□□□□ -0.74
COMMD4-205ENST00000562310 VWFP04275 2813 aa10.41□□□□□ -0.74
COMMD4-205ENST00000562310 KIR2DL5BA0A0G2JN68 375 aa10.41□□□□□ -0.74
COMMD4-205ENST00000562310 KIR2DL5BA0A0G2JPC4 375 aa10.41□□□□□ -0.74
COMMD4-205ENST00000562310 M0R381 172 aa10.41□□□□□ -0.74
COMMD4-205ENST00000562310 GIG44P09565 113 aaPredicted RBP10.41□□□□□ -0.74
COMMD4-205ENST00000562310 APOC4P55056 127 aa10.41□□□□□ -0.74
COMMD4-205ENST00000562310 KIR2DL5AQ8N109 375 aa10.41□□□□□ -0.74
COMMD4-205ENST00000562310 C1orf158Q8N1D5 194 aa10.41□□□□□ -0.74
COMMD4-205ENST00000562310 KIR2DL5BQ8NHK3 375 aa10.41□□□□□ -0.74
COMMD4-205ENST00000562310 CSTL1Q9H114 145 aa10.41□□□□□ -0.74
COMMD4-205ENST00000562310 NOTCH3Q9UM47 2321 aa10.4□□□□□ -0.74
COMMD4-205ENST00000562310 SRIP30626 198 aa10.4□□□□□ -0.74
COMMD4-205ENST00000562310 SSTP61278 116 aa10.4□□□□□ -0.74
COMMD4-205ENST00000562310 KIAA1644Q3SXP7 199 aa10.4□□□□□ -0.74
COMMD4-205ENST00000562310 OR10J3Q5JRS4 329 aa10.4□□□□□ -0.74
COMMD4-205ENST00000562310 COA6Q5JTJ3 125 aaKnown RBP10.4□□□□□ -0.74
COMMD4-205ENST00000562310 PIK3CD-AS1Q5SR53 167 aa10.4□□□□□ -0.74
COMMD4-205ENST00000562310 PTH2Q96A98 100 aa10.4□□□□□ -0.74
COMMD4-205ENST00000562310 SPXQ9BT56 116 aa10.4□□□□□ -0.74
COMMD4-205ENST00000562310 MSRB1Q9NZV6 116 aa10.4□□□□□ -0.74
COMMD4-205ENST00000562310 MDFICQ9P1T7 246 aa10.4□□□□□ -0.74
COMMD4-205ENST00000562310 PPBPP02775 128 aa10.39□□□□□ -0.75
COMMD4-205ENST00000562310 NDUFA6P56556 154 aa10.39□□□□□ -0.75
COMMD4-205ENST00000562310 Q0VG73 95 aa10.39□□□□□ -0.75
COMMD4-205ENST00000562310 OXLD1Q5BKU9 147 aa10.39□□□□□ -0.75
COMMD4-205ENST00000562310 AMN1Q8IY45 258 aa10.39□□□□□ -0.75
COMMD4-205ENST00000562310 CSNK1G2-AS1Q8NCQ2 148 aa10.39□□□□□ -0.75
COMMD4-205ENST00000562310 ALKBH7Q9BT30 221 aaPredicted RBP10.39□□□□□ -0.75
COMMD4-205ENST00000562310 MUC4Q99102 2169 aa10.38□□□□□ -0.75
COMMD4-205ENST00000562310 C5orf52A6NGY3 159 aa10.38□□□□□ -0.75
COMMD4-205ENST00000562310 HTN1P15515 57 aa10.38□□□□□ -0.75
COMMD4-205ENST00000562310 ZNF705AQ6ZN79 300 aaPredicted RBP10.38□□□□□ -0.75
COMMD4-205ENST00000562310 TMEM263Q8WUH6 116 aaKnown RBP10.38□□□□□ -0.75
COMMD4-205ENST00000562310 NDUFAF3Q9BU61 184 aa10.38□□□□□ -0.75
COMMD4-205ENST00000562310 DPH3P1Q9H4G8 78 aa10.38□□□□□ -0.75
COMMD4-205ENST00000562310 U3KQK5 164 aa10.38□□□□□ -0.75
COMMD4-205ENST00000562310 IGHV3OR16-12A0A075B7B8 117 aa10.37□□□□□ -0.75
COMMD4-205ENST00000562310 M0R2P5 195 aa10.37□□□□□ -0.75
COMMD4-205ENST00000562310 UBE2CO00762 179 aa10.37□□□□□ -0.75
COMMD4-205ENST00000562310 SMIM17P0DL12 118 aa10.37□□□□□ -0.75
COMMD4-205ENST00000562310 EVI2AP22794 236 aa10.37□□□□□ -0.75
COMMD4-205ENST00000562310 MRPL51Q4U2R6 128 aaKnown RBP10.37□□□□□ -0.75
COMMD4-205ENST00000562310 ORMDL3Q8N138 153 aa10.37□□□□□ -0.75
COMMD4-205ENST00000562310 C11orf72Q8NBR9 251 aa10.37□□□□□ -0.75
COMMD4-205ENST00000562310 MRAP2Q96G30 205 aa10.37□□□□□ -0.75
COMMD4-205ENST00000562310 C16orf74Q96GX8 76 aa10.37□□□□□ -0.75
COMMD4-205ENST00000562310 RCHY1Q96PM5 261 aa10.37□□□□□ -0.75
COMMD4-205ENST00000562310 LAMTOR2Q9Y2Q5 125 aa10.37□□□□□ -0.75
COMMD4-205ENST00000562310 RAB4AP20338 218 aa10.36□□□□□ -0.75
COMMD4-205ENST00000562310 CKS2P33552 79 aa10.36□□□□□ -0.75
COMMD4-205ENST00000562310 SNRPEP62304 92 aaKnown RBP10.36□□□□□ -0.75
COMMD4-205ENST00000562310 SAMD5Q5TGI4 173 aa10.36□□□□□ -0.75
COMMD4-205ENST00000562310 BAGE3Q86Y29 109 aa10.36□□□□□ -0.75
COMMD4-205ENST00000562310 IL17DQ8TAD2 202 aa10.36□□□□□ -0.75
COMMD4-205ENST00000562310 RNASE8Q8TDE3 154 aaKnown RBP10.36□□□□□ -0.75
COMMD4-205ENST00000562310 RNF185Q96GF1 192 aa10.36□□□□□ -0.75
COMMD4-205ENST00000562310 A8MZ25 164 aa10.35□□□□□ -0.75
COMMD4-205ENST00000562310 D6R8Y8 96 aa10.35□□□□□ -0.75
COMMD4-205ENST00000562310 IGHV4-30-4P0DP06 118 aa10.35□□□□□ -0.75
COMMD4-205ENST00000562310 HOXA5P20719 270 aa10.35□□□□□ -0.75
COMMD4-205ENST00000562310 KRTAP10-11P60412 298 aa10.35□□□□□ -0.75
COMMD4-205ENST00000562310 RRN3P1Q2M238 152 aa10.35□□□□□ -0.75
COMMD4-205ENST00000562310 ZNF876PQ49A33 203 aa10.35□□□□□ -0.75
COMMD4-205ENST00000562310 C18orf32Q8TCD1 76 aa10.35□□□□□ -0.75
COMMD4-205ENST00000562310 PRELID3AQ96N28 172 aa10.35□□□□□ -0.75
COMMD4-205ENST00000562310 GSN-AS1Q9NRJ2 163 aa10.35□□□□□ -0.75
COMMD4-205ENST00000562310 SMIM9A6NGZ8 99 aa10.34□□□□□ -0.75
COMMD4-205ENST00000562310 A8MWV9 139 aa10.34□□□□□ -0.75
COMMD4-205ENST00000562310 SPRY2O43597 315 aa10.34□□□□□ -0.75
COMMD4-205ENST00000562310 C14orf178Q8N769 122 aaPredicted RBP10.34□□□□□ -0.75
COMMD4-205ENST00000562310 LOC105371267A0A1B0GV96 52 aa10.33□□□□□ -0.76
COMMD4-205ENST00000562310 MGPP08493 103 aa10.33□□□□□ -0.76
COMMD4-205ENST00000562310 POM121L12Q8N7R1 296 aa10.33□□□□□ -0.76
COMMD4-205ENST00000562310 G3V4G9 280 aa10.32□□□□□ -0.76
COMMD4-205ENST00000562310 PPP1R17O96001 155 aa10.32□□□□□ -0.76
COMMD4-205ENST00000562310 ESDP10768 282 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms