RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 IGHV3-16A0A0C4DH30 117 aa7.02□□□□□ -1.29
CDC42BPB-207ENST00000560492 LRCOL1A6NCL2 159 aa7.02□□□□□ -1.29
CDC42BPB-207ENST00000560492 KRTAP29-1A8MX34 341 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPB-207ENST00000560492 SEC11BP0C7V7 166 aa7.02□□□□□ -1.29
CDC42BPB-207ENST00000560492 CSN1S1P47710 185 aa7.02□□□□□ -1.29
CDC42BPB-207ENST00000560492 RPL29P47914 159 aaKnown RBP7.02□□□□□ -1.29
CDC42BPB-207ENST00000560492 SH2D6Q7Z4S9 175 aa7.02□□□□□ -1.29
CDC42BPB-207ENST00000560492 SPXQ9BT56 116 aa7.02□□□□□ -1.29
CDC42BPB-207ENST00000560492 TRAV4A0A0B4J268 109 aa7.01□□□□□ -1.29
CDC42BPB-207ENST00000560492 UMAD1C9J7I0 102 aa7.01□□□□□ -1.29
CDC42BPB-207ENST00000560492 LECT2O14960 151 aa7.01□□□□□ -1.29
CDC42BPB-207ENST00000560492 OR10J4P0C629 311 aa7.01□□□□□ -1.29
CDC42BPB-207ENST00000560492 RAB5CP51148 216 aa7.01□□□□□ -1.29
CDC42BPB-207ENST00000560492 IQCF2Q8IXL9 164 aa7.01□□□□□ -1.29
CDC42BPB-207ENST00000560492 PSMG3Q9BT73 122 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPB-207ENST00000560492 NPCDR1Q9BY65 106 aa7.01□□□□□ -1.29
CDC42BPB-207ENST00000560492 IBA57-AS1B1ANH7 110 aa7□□□□□ -1.29
CDC42BPB-207ENST00000560492 MBP02144 154 aa7□□□□□ -1.29
CDC42BPB-207ENST00000560492 NBEAP1P0C6P0 100 aa7□□□□□ -1.29
CDC42BPB-207ENST00000560492 SULT1A2P50226 295 aa7□□□□□ -1.29
CDC42BPB-207ENST00000560492 NDUFA5Q16718 116 aa7□□□□□ -1.29
CDC42BPB-207ENST00000560492 LINC01556Q5JQF7 62 aa7□□□□□ -1.29
CDC42BPB-207ENST00000560492 GCSAMLQ5JQS6 135 aa7□□□□□ -1.29
CDC42BPB-207ENST00000560492 FFAR4Q5NUL3 377 aa7□□□□□ -1.29
CDC42BPB-207ENST00000560492 FAM213BQ8TBF2 198 aa7□□□□□ -1.29
CDC42BPB-207ENST00000560492 TM2D2Q9BX73 214 aa7□□□□□ -1.29
CDC42BPB-207ENST00000560492 SLC25A2Q9BXI2 301 aa7□□□□□ -1.29
CDC42BPB-207ENST00000560492 OR51M1Q9H341 326 aa7□□□□□ -1.29
CDC42BPB-207ENST00000560492 RPH3ALQ9UNE2 315 aa7□□□□□ -1.29
CDC42BPB-207ENST00000560492 PLA2G2DQ9UNK4 145 aa7□□□□□ -1.29
CDC42BPB-207ENST00000560492 OR7C2O60412 319 aa6.99□□□□□ -1.29
CDC42BPB-207ENST00000560492 RAB2AP61019 212 aa6.99□□□□□ -1.29
CDC42BPB-207ENST00000560492 BLOC1S1P78537 153 aa6.99□□□□□ -1.29
CDC42BPB-207ENST00000560492 SERF2P84101 59 aa6.99□□□□□ -1.29
CDC42BPB-207ENST00000560492 ACOT6Q3I5F7 207 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPB-207ENST00000560492 CLLU1Q5K131 121 aa6.99□□□□□ -1.29
CDC42BPB-207ENST00000560492 DPPA3Q6W0C5 159 aa6.99□□□□□ -1.29
CDC42BPB-207ENST00000560492 MIR17HGQ75NE6 70 aa6.99□□□□□ -1.29
CDC42BPB-207ENST00000560492 RASL10AQ92737 203 aa6.99□□□□□ -1.29
CDC42BPB-207ENST00000560492 PRADC1Q9BSG0 188 aa6.99□□□□□ -1.29
CDC42BPB-207ENST00000560492 PAXXQ9BUH6 204 aa6.99□□□□□ -1.29
CDC42BPB-207ENST00000560492 FBLL1A6NHQ2 334 aaKnown RBP6.98□□□□□ -1.29
CDC42BPB-207ENST00000560492 TEX46H3BTG2 121 aa6.98□□□□□ -1.29
CDC42BPB-207ENST00000560492 M0R2P5 195 aa6.98□□□□□ -1.29
CDC42BPB-207ENST00000560492 PFN1P07737 140 aaKnown RBP6.98□□□□□ -1.29
CDC42BPB-207ENST00000560492 RANP62826 216 aaKnown RBP6.98□□□□□ -1.29
CDC42BPB-207ENST00000560492 LINC01620Q4KN68 170 aa6.98□□□□□ -1.29
CDC42BPB-207ENST00000560492 IGHV3-73A0A0B4J1V6 119 aa6.97□□□□□ -1.29
CDC42BPB-207ENST00000560492 GNRH2O43555 120 aa6.97□□□□□ -1.29
CDC42BPB-207ENST00000560492 EIF4EBP3O60516 100 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPB-207ENST00000560492 UBE2L3P68036 154 aaKnown RBP6.97□□□□□ -1.29
CDC42BPB-207ENST00000560492 TRBV7-9A0A0J9YWB2 115 aa6.96□□□□□ -1.3
CDC42BPB-207ENST00000560492 A0A1W2PPV4 95 aa6.96□□□□□ -1.3
CDC42BPB-207ENST00000560492 RBFOX3A6NFN3 312 aa6.96□□□□□ -1.3
CDC42BPB-207ENST00000560492 GATA1P15976 413 aaPredicted RBP6.96□□□□□ -1.3
CDC42BPB-207ENST00000560492 TIRAPP58753 221 aa6.96□□□□□ -1.3
CDC42BPB-207ENST00000560492 WFDC2Q14508 124 aa6.96□□□□□ -1.3
CDC42BPB-207ENST00000560492 RHOHQ15669 191 aa6.96□□□□□ -1.3
CDC42BPB-207ENST00000560492 Q6AWC8 147 aa6.96□□□□□ -1.3
CDC42BPB-207ENST00000560492 SCXQ7RTU7 201 aa6.96□□□□□ -1.3
CDC42BPB-207ENST00000560492 COMMD7Q86VX2 200 aa6.96□□□□□ -1.3
CDC42BPB-207ENST00000560492 OR10G9Q8NGN4 311 aa6.96□□□□□ -1.3
CDC42BPB-207ENST00000560492 OR10G7Q8NGN6 311 aa6.96□□□□□ -1.3
CDC42BPB-207ENST00000560492 ACTR3CQ9C0K3 210 aaPredicted RBP6.96□□□□□ -1.3
CDC42BPB-207ENST00000560492 SDF2L1Q9HCN8 221 aa6.96□□□□□ -1.3
CDC42BPB-207ENST00000560492 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.96□□□□□ -1.3
CDC42BPB-207ENST00000560492 A0A1B0GV50 99 aa6.95□□□□□ -1.3
CDC42BPB-207ENST00000560492 RBAKDNA6NC62 111 aa6.95□□□□□ -1.3
CDC42BPB-207ENST00000560492 F6UZH7 168 aa6.95□□□□□ -1.3
CDC42BPB-207ENST00000560492 CDC34P49427 236 aaPredicted RBP6.95□□□□□ -1.3
CDC42BPB-207ENST00000560492 FHITP49789 147 aa6.95□□□□□ -1.3
CDC42BPB-207ENST00000560492 LAGE3Q14657 143 aa6.95□□□□□ -1.3
CDC42BPB-207ENST00000560492 LELP1Q5T871 98 aa6.95□□□□□ -1.3
CDC42BPB-207ENST00000560492 SLC25A29Q8N8R3 303 aa6.95□□□□□ -1.3
CDC42BPB-207ENST00000560492 ATP6V0E2Q8NHE4 81 aa6.95□□□□□ -1.3
CDC42BPB-207ENST00000560492 CMTM2Q8TAZ6 248 aa6.95□□□□□ -1.3
CDC42BPB-207ENST00000560492 SFT2D1Q8WV19 159 aa6.95□□□□□ -1.3
CDC42BPB-207ENST00000560492 BAALCQ8WXS3 180 aa6.95□□□□□ -1.3
CDC42BPB-207ENST00000560492 FXYD5Q96DB9 178 aa6.95□□□□□ -1.3
CDC42BPB-207ENST00000560492 FAM167A-AS1Q96KT0 104 aa6.95□□□□□ -1.3
CDC42BPB-207ENST00000560492 KRTAP4-2Q9BYR5 136 aa6.95□□□□□ -1.3
CDC42BPB-207ENST00000560492 TRAV8-3A0A0A6YYJ7 113 aa6.94□□□□□ -1.3
CDC42BPB-207ENST00000560492 TRAV21A0A0B4J279 112 aa6.94□□□□□ -1.3
CDC42BPB-207ENST00000560492 CTXND1A0A1B0GTU2 59 aa6.94□□□□□ -1.3
CDC42BPB-207ENST00000560492 MAP1LC3B2A6NCE7 125 aa6.94□□□□□ -1.3
CDC42BPB-207ENST00000560492 DIRC3C9JPN6 131 aa6.94□□□□□ -1.3
CDC42BPB-207ENST00000560492 TYMSP04818 313 aa6.94□□□□□ -1.3
CDC42BPB-207ENST00000560492 ZNF876PQ49A33 203 aa6.94□□□□□ -1.3
CDC42BPB-207ENST00000560492 Q6ZSA8 131 aa6.94□□□□□ -1.3
CDC42BPB-207ENST00000560492 KCNS1Q96KK3 526 aa6.94□□□□□ -1.3
CDC42BPB-207ENST00000560492 MAP1LC3BQ9GZQ8 125 aa6.94□□□□□ -1.3
CDC42BPB-207ENST00000560492 GTSF1LQ9H1H1 148 aa6.94□□□□□ -1.3
CDC42BPB-207ENST00000560492 LENEPQ9Y5L5 61 aa6.94□□□□□ -1.3
CDC42BPB-207ENST00000560492 LINC00862A6NCI5 91 aa6.93□□□□□ -1.3
CDC42BPB-207ENST00000560492 GGTLC3B5MD39 225 aa6.93□□□□□ -1.3
CDC42BPB-207ENST00000560492 OXTP01178 125 aa6.93□□□□□ -1.3
CDC42BPB-207ENST00000560492 IGLV2-8P01709 118 aa6.93□□□□□ -1.3
CDC42BPB-207ENST00000560492 TAS2R45P59539 299 aa6.93□□□□□ -1.3
CDC42BPB-207ENST00000560492 TDRG1Q3Y452 100 aa6.93□□□□□ -1.3
CDC42BPB-207ENST00000560492 TOR2AQ5JU69 321 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms