RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 NOTCH3Q9UM47 2321 aa10.6□□□□□ -0.71
CARMIL3-203ENST00000560349 A0A1W2PRX2 142 aa10.6□□□□□ -0.71
CARMIL3-203ENST00000560349 NUDT3O95989 172 aa10.6□□□□□ -0.71
CARMIL3-203ENST00000560349 RNASE4P34096 147 aaKnown RBP10.6□□□□□ -0.71
CARMIL3-203ENST00000560349 PSMG4Q5JS54 123 aa10.6□□□□□ -0.71
CARMIL3-203ENST00000560349 Q6AWC8 147 aa10.6□□□□□ -0.71
CARMIL3-203ENST00000560349 ZFAND2AQ8N6M9 145 aa10.6□□□□□ -0.71
CARMIL3-203ENST00000560349 OR8A1Q8NGG7 326 aa10.6□□□□□ -0.71
CARMIL3-203ENST00000560349 DCANP1Q8TF63 244 aa10.6□□□□□ -0.71
CARMIL3-203ENST00000560349 HSPB8Q9UJY1 196 aa10.6□□□□□ -0.71
CARMIL3-203ENST00000560349 ZNF580Q9UK33 172 aa10.6□□□□□ -0.71
CARMIL3-203ENST00000560349 H3BVH4 76 aa10.6□□□□□ -0.71
CARMIL3-203ENST00000560349 ELANEP08246 267 aa10.6□□□□□ -0.71
CARMIL3-203ENST00000560349 LINC01559Q495D7 138 aa10.6□□□□□ -0.71
CARMIL3-203ENST00000560349 LINC01545Q5VT33 79 aa10.6□□□□□ -0.71
CARMIL3-203ENST00000560349 AP5S1Q9NUS5 200 aa10.6□□□□□ -0.71
CARMIL3-203ENST00000560349 UFC1Q9Y3C8 167 aa10.6□□□□□ -0.71
CARMIL3-203ENST00000560349 BVES-AS1Q5T3Y7 98 aa10.59□□□□□ -0.71
CARMIL3-203ENST00000560349 Q6ZSV7 163 aa10.59□□□□□ -0.71
CARMIL3-203ENST00000560349 ZNF747Q9BV97 191 aa10.59□□□□□ -0.71
CARMIL3-203ENST00000560349 FLNBO75369 2602 aaKnown RBP10.59□□□□□ -0.71
CARMIL3-203ENST00000560349 MRPL51Q4U2R6 128 aaKnown RBP10.59□□□□□ -0.71
CARMIL3-203ENST00000560349 UBE2E2Q96LR5 201 aa10.59□□□□□ -0.71
CARMIL3-203ENST00000560349 IFI27P40305 119 aaPredicted RBP10.58□□□□□ -0.72
CARMIL3-203ENST00000560349 OR11H1Q8NG94 326 aa10.58□□□□□ -0.72
CARMIL3-203ENST00000560349 PRSS3P2Q8NHM4 247 aa10.58□□□□□ -0.72
CARMIL3-203ENST00000560349 MYOZ3Q8TDC0 251 aa10.58□□□□□ -0.72
CARMIL3-203ENST00000560349 A0A096LNJ9 63 aa10.58□□□□□ -0.72
CARMIL3-203ENST00000560349 K7EMT4 169 aa10.58□□□□□ -0.72
CARMIL3-203ENST00000560349 TAX1BP3O14907 124 aa10.58□□□□□ -0.72
CARMIL3-203ENST00000560349 GATA1P15976 413 aaPredicted RBP10.58□□□□□ -0.72
CARMIL3-203ENST00000560349 RPS20P60866 119 aaKnown RBP10.58□□□□□ -0.72
CARMIL3-203ENST00000560349 FAM104BQ5XKR9 115 aa10.58□□□□□ -0.72
CARMIL3-203ENST00000560349 ZNF493Q6ZR52 646 aa10.58□□□□□ -0.72
CARMIL3-203ENST00000560349 A0A1B0GW15 77 aa10.57□□□□□ -0.72
CARMIL3-203ENST00000560349 EVI2AP22794 236 aa10.57□□□□□ -0.72
CARMIL3-203ENST00000560349 SCGB2A2Q13296 93 aa10.57□□□□□ -0.72
CARMIL3-203ENST00000560349 ADAMTSL5Q6ZMM2 481 aa10.57□□□□□ -0.72
CARMIL3-203ENST00000560349 OVOL1O14753 267 aa10.57□□□□□ -0.72
CARMIL3-203ENST00000560349 FA2HQ7L5A8 372 aa10.57□□□□□ -0.72
CARMIL3-203ENST00000560349 KLHL30-AS1Q8NEE0 82 aa10.57□□□□□ -0.72
CARMIL3-203ENST00000560349 TRAV12-2A0A075B6T6 113 aa10.56□□□□□ -0.72
CARMIL3-203ENST00000560349 TRAV26-2A0A0B4J265 109 aa10.56□□□□□ -0.72
CARMIL3-203ENST00000560349 SRSF2Q01130 221 aaKnown RBP10.56□□□□□ -0.72
CARMIL3-203ENST00000560349 GAGE12BA1L429 117 aa10.56□□□□□ -0.72
CARMIL3-203ENST00000560349 TMEM89A2RUT3 159 aa10.56□□□□□ -0.72
CARMIL3-203ENST00000560349 NPYP01303 97 aa10.56□□□□□ -0.72
CARMIL3-203ENST00000560349 LINC00477Q96M19 166 aa10.56□□□□□ -0.72
CARMIL3-203ENST00000560349 PRELID3AQ96N28 172 aa10.56□□□□□ -0.72
CARMIL3-203ENST00000560349 SIGLEC8Q9NYZ4 499 aa10.56□□□□□ -0.72
CARMIL3-203ENST00000560349 GNRH2O43555 120 aa10.55□□□□□ -0.72
CARMIL3-203ENST00000560349 CKS2P33552 79 aa10.55□□□□□ -0.72
CARMIL3-203ENST00000560349 ANXA2RQ3ZCQ2 193 aa10.55□□□□□ -0.72
CARMIL3-203ENST00000560349 SAMD13Q5VXD3 122 aa10.55□□□□□ -0.72
CARMIL3-203ENST00000560349 FN1P02751 2386 aaKnown RBP10.55□□□□□ -0.72
CARMIL3-203ENST00000560349 M0R381 172 aa10.55□□□□□ -0.72
CARMIL3-203ENST00000560349 SNAI2O43623 268 aa10.55□□□□□ -0.72
CARMIL3-203ENST00000560349 Q8N2B8 174 aa10.55□□□□□ -0.72
CARMIL3-203ENST00000560349 DEFB125Q8N687 156 aa10.55□□□□□ -0.72
CARMIL3-203ENST00000560349 U3KQK5 164 aa10.55□□□□□ -0.72
CARMIL3-203ENST00000560349 SPANXN1Q5VSR9 72 aa10.54□□□□□ -0.72
CARMIL3-203ENST00000560349 ORMDL3Q8N138 153 aa10.54□□□□□ -0.72
CARMIL3-203ENST00000560349 RNF185Q96GF1 192 aa10.54□□□□□ -0.72
CARMIL3-203ENST00000560349 HIVEP1P15822 2718 aa10.54□□□□□ -0.72
CARMIL3-203ENST00000560349 C12orf54Q6X4T0 127 aa10.54□□□□□ -0.72
CARMIL3-203ENST00000560349 C2orf91Q6ZV80 131 aa10.54□□□□□ -0.72
CARMIL3-203ENST00000560349 TRAV12-3A0A0B4J271 114 aa10.53□□□□□ -0.72
CARMIL3-203ENST00000560349 COX8AP10176 69 aa10.53□□□□□ -0.72
CARMIL3-203ENST00000560349 DLX4Q92988 240 aaPredicted RBP10.53□□□□□ -0.72
CARMIL3-203ENST00000560349 VWFP04275 2813 aa10.53□□□□□ -0.72
CARMIL3-203ENST00000560349 NSD1Q96L73 2696 aaPredicted RBP10.53□□□□□ -0.72
CARMIL3-203ENST00000560349 S100A4P26447 101 aaKnown RBP10.53□□□□□ -0.72
CARMIL3-203ENST00000560349 ID1P41134 155 aa10.53□□□□□ -0.72
CARMIL3-203ENST00000560349 RNF152Q8N8N0 203 aa10.53□□□□□ -0.72
CARMIL3-203ENST00000560349 DPF1Q92782 380 aa10.53□□□□□ -0.72
CARMIL3-203ENST00000560349 TRAV21A0A0B4J279 112 aa10.52□□□□□ -0.73
CARMIL3-203ENST00000560349 LINC01619G3V211 115 aa10.52□□□□□ -0.73
CARMIL3-203ENST00000560349 CD5LO43866 347 aa10.52□□□□□ -0.73
CARMIL3-203ENST00000560349 SPINK13Q1W4C9 94 aa10.52□□□□□ -0.73
CARMIL3-203ENST00000560349 AMMECR1LQ6DCA0 310 aa10.52□□□□□ -0.73
CARMIL3-203ENST00000560349 OR1N2Q8NGR9 330 aa10.52□□□□□ -0.73
CARMIL3-203ENST00000560349 FOXC2Q99958 501 aa10.52□□□□□ -0.73
CARMIL3-203ENST00000560349 CNFNQ9BYD5 112 aa10.52□□□□□ -0.73
CARMIL3-203ENST00000560349 A0A1B0GV72 72 aa10.51□□□□□ -0.73
CARMIL3-203ENST00000560349 K7EQG2 157 aa10.51□□□□□ -0.73
CARMIL3-203ENST00000560349 CD28P10747 220 aa10.51□□□□□ -0.73
CARMIL3-203ENST00000560349 FAM19A4Q96LR4 140 aa10.51□□□□□ -0.73
CARMIL3-203ENST00000560349 SNRPD3P62318 126 aaKnown RBP10.51□□□□□ -0.73
CARMIL3-203ENST00000560349 TRAV26-1A0A087WT03 109 aa10.51□□□□□ -0.73
CARMIL3-203ENST00000560349 KNCNA6PVL3 124 aa10.51□□□□□ -0.73
CARMIL3-203ENST00000560349 FGF6P10767 208 aa10.51□□□□□ -0.73
CARMIL3-203ENST00000560349 CRYBA4P53673 196 aa10.51□□□□□ -0.73
CARMIL3-203ENST00000560349 TMEM61Q8N0U2 210 aa10.51□□□□□ -0.73
CARMIL3-203ENST00000560349 LENEPQ9Y5L5 61 aa10.51□□□□□ -0.73
CARMIL3-203ENST00000560349 TENM1Q9UKZ4 2725 aa10.5□□□□□ -0.73
CARMIL3-203ENST00000560349 G3V4G9 280 aa10.5□□□□□ -0.73
CARMIL3-203ENST00000560349 LGALS9O00182 355 aa10.5□□□□□ -0.73
CARMIL3-203ENST00000560349 MUC4Q99102 2169 aa10.5□□□□□ -0.73
CARMIL3-203ENST00000560349 C2CD3Q4AC94 2353 aa10.5□□□□□ -0.73
CARMIL3-203ENST00000560349 C4orf3Q8WVX3 66 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms