RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 A8MWV9 139 aa8.27□□□□□ -1.09
SPG11-219ENST00000559822 IFNA7P01567 189 aa8.27□□□□□ -1.09
SPG11-219ENST00000559822 PIK3CD-AS1Q5SR53 167 aa8.27□□□□□ -1.09
SPG11-219ENST00000559822 LELP1Q5T871 98 aa8.27□□□□□ -1.09
SPG11-219ENST00000559822 NTN5Q8WTR8 489 aaPredicted RBP8.27□□□□□ -1.09
SPG11-219ENST00000559822 FXYD6-FXYD2A0A087WZ82 144 aa8.26□□□□□ -1.09
SPG11-219ENST00000559822 FABP5P3A8MUU1 101 aa8.26□□□□□ -1.09
SPG11-219ENST00000559822 IBA57-AS1B1ANH7 110 aa8.26□□□□□ -1.09
SPG11-219ENST00000559822 RNASE3P12724 160 aaKnown RBP8.26□□□□□ -1.09
SPG11-219ENST00000559822 GCSHP23434 173 aa8.26□□□□□ -1.09
SPG11-219ENST00000559822 RPL7L1Q6DKI1 246 aaKnown RBP8.26□□□□□ -1.09
SPG11-219ENST00000559822 DPPA3Q6W0C5 159 aa8.26□□□□□ -1.09
SPG11-219ENST00000559822 ZFP2Q6ZN57 461 aa8.26□□□□□ -1.09
SPG11-219ENST00000559822 ATP6V0E2Q8NHE4 81 aa8.26□□□□□ -1.09
SPG11-219ENST00000559822 GTSF1LQ9H1H1 148 aa8.26□□□□□ -1.09
SPG11-219ENST00000559822 IGHV3-73A0A0B4J1V6 119 aa8.25□□□□□ -1.09
SPG11-219ENST00000559822 PGPEP1LA6NFU8 196 aa8.25□□□□□ -1.09
SPG11-219ENST00000559822 PEX7O00628 323 aa8.25□□□□□ -1.09
SPG11-219ENST00000559822 FUSP35637 526 aaKnown RBP eCLIP8.25□□□□□ -1.09
SPG11-219ENST00000559822 ASIPP42127 132 aa8.25□□□□□ -1.09
SPG11-219ENST00000559822 LAGE3Q14657 143 aa8.25□□□□□ -1.09
SPG11-219ENST00000559822 AKR1C8PQ5T2L2 129 aa8.25□□□□□ -1.09
SPG11-219ENST00000559822 FRZBQ92765 325 aa8.25□□□□□ -1.09
SPG11-219ENST00000559822 HIST1H2BAQ96A08 127 aa8.25□□□□□ -1.09
SPG11-219ENST00000559822 ARL2-SNX15V9GYD0 113 aa8.25□□□□□ -1.09
SPG11-219ENST00000559822 IGLV5-52A0A0A0MRZ9 124 aa8.24□□□□□ -1.09
SPG11-219ENST00000559822 RNF222A6NCQ9 220 aa8.24□□□□□ -1.09
SPG11-219ENST00000559822 XGP55808 180 aa8.24□□□□□ -1.09
SPG11-219ENST00000559822 KRTAP10-1P60331 282 aa8.24□□□□□ -1.09
SPG11-219ENST00000559822 LGALSLQ3ZCW2 172 aaPredicted RBP8.24□□□□□ -1.09
SPG11-219ENST00000559822 Q5BKY6 102 aa8.24□□□□□ -1.09
SPG11-219ENST00000559822 SYT8Q8NBV8 401 aa8.24□□□□□ -1.09
SPG11-219ENST00000559822 OR2T35Q8NGX2 323 aa8.24□□□□□ -1.09
SPG11-219ENST00000559822 TM2D2Q9BX73 214 aa8.24□□□□□ -1.09
SPG11-219ENST00000559822 PARLQ9H300 379 aa8.24□□□□□ -1.09
SPG11-219ENST00000559822 Q9HAA7 133 aa8.24□□□□□ -1.09
SPG11-219ENST00000559822 IL36BQ9NZH7 164 aa8.24□□□□□ -1.09
SPG11-219ENST00000559822 A0A087WWC5 75 aa8.23□□□□□ -1.09
SPG11-219ENST00000559822 TRAV34A0A0B4J273 112 aa8.23□□□□□ -1.09
SPG11-219ENST00000559822 IGKV3D-20A0A0C4DH25 116 aa8.23□□□□□ -1.09
SPG11-219ENST00000559822 B4DEV8 164 aa8.23□□□□□ -1.09
SPG11-219ENST00000559822 RHODO00212 210 aa8.23□□□□□ -1.09
SPG11-219ENST00000559822 IGHV3-30P01768 117 aa8.23□□□□□ -1.09
SPG11-219ENST00000559822 IGHV3-33P01772 117 aa8.23□□□□□ -1.09
SPG11-219ENST00000559822 IGHV3-30-3P0DP02 117 aa8.23□□□□□ -1.09
SPG11-219ENST00000559822 IGHV3-30-5P0DP03 117 aa8.23□□□□□ -1.09
SPG11-219ENST00000559822 FGF8P55075 233 aaPredicted RBP8.23□□□□□ -1.09
SPG11-219ENST00000559822 UBE2G2P60604 165 aa8.23□□□□□ -1.09
SPG11-219ENST00000559822 Q86TA4 180 aa8.23□□□□□ -1.09
SPG11-219ENST00000559822 LINC00479Q96M42 142 aa8.23□□□□□ -1.09
SPG11-219ENST00000559822 TCEAL7Q9BRU2 100 aa8.23□□□□□ -1.09
SPG11-219ENST00000559822 ZFP30Q9Y2G7 519 aa8.23□□□□□ -1.09
SPG11-219ENST00000559822 FAM74A7A6NL05 159 aa8.22□□□□□ -1.09
SPG11-219ENST00000559822 UBE2G1P62253 170 aa8.22□□□□□ -1.09
SPG11-219ENST00000559822 ZNF726P1Q15940 193 aa8.22□□□□□ -1.09
SPG11-219ENST00000559822 TOR2AQ5JU69 321 aa8.22□□□□□ -1.09
SPG11-219ENST00000559822 STOML3Q8TAV4 291 aa8.22□□□□□ -1.09
SPG11-219ENST00000559822 FMC1Q96HJ9 113 aa8.22□□□□□ -1.09
SPG11-219ENST00000559822 TRAV8-3A0A0A6YYJ7 113 aa8.21□□□□□ -1.1
SPG11-219ENST00000559822 MAP1LC3B2A6NCE7 125 aa8.21□□□□□ -1.1
SPG11-219ENST00000559822 LRCOL1A6NCL2 159 aa8.21□□□□□ -1.1
SPG11-219ENST00000559822 H3BVH4 76 aa8.21□□□□□ -1.1
SPG11-219ENST00000559822 INAFM2P0DMQ5 153 aa8.21□□□□□ -1.1
SPG11-219ENST00000559822 DNLZQ5SXM8 178 aa8.21□□□□□ -1.1
SPG11-219ENST00000559822 FAM162BQ5T6X4 162 aa8.21□□□□□ -1.1
SPG11-219ENST00000559822 Q5VSD8 79 aa8.21□□□□□ -1.1
SPG11-219ENST00000559822 COX8CQ7Z4L0 72 aa8.21□□□□□ -1.1
SPG11-219ENST00000559822 Q8N814 137 aa8.21□□□□□ -1.1
SPG11-219ENST00000559822 OR11H4Q8NGC9 324 aa8.21□□□□□ -1.1
SPG11-219ENST00000559822 TMEM70Q9BUB7 260 aa8.21□□□□□ -1.1
SPG11-219ENST00000559822 MAP1LC3BQ9GZQ8 125 aa8.21□□□□□ -1.1
SPG11-219ENST00000559822 GAGE12JA6NER3 117 aa8.2□□□□□ -1.1
SPG11-219ENST00000559822 SEC11BP0C7V7 166 aa8.2□□□□□ -1.1
SPG11-219ENST00000559822 LINC00694P0DN24 101 aa8.2□□□□□ -1.1
SPG11-219ENST00000559822 FHITP49789 147 aa8.2□□□□□ -1.1
SPG11-219ENST00000559822 GAGE1Q13065 139 aa8.2□□□□□ -1.1
SPG11-219ENST00000559822 GAGE4Q13068 117 aa8.2□□□□□ -1.1
SPG11-219ENST00000559822 GAGE5Q13069 117 aa8.2□□□□□ -1.1
SPG11-219ENST00000559822 GAGE13Q4V321 117 aa8.2□□□□□ -1.1
SPG11-219ENST00000559822 ZC2HC1AQ96GY0 325 aa8.2□□□□□ -1.1
SPG11-219ENST00000559822 PHLDA3Q9Y5J5 127 aa8.2□□□□□ -1.1
SPG11-219ENST00000559822 TRBV6-1A0A0K0K1D8 114 aa8.19□□□□□ -1.1
SPG11-219ENST00000559822 KRBOX1C9JBD0 128 aa8.19□□□□□ -1.1
SPG11-219ENST00000559822 FAM229AH3BQW9 127 aa8.19□□□□□ -1.1
SPG11-219ENST00000559822 M0R036 132 aa8.19□□□□□ -1.1
SPG11-219ENST00000559822 ARPC5O15511 151 aa8.19□□□□□ -1.1
SPG11-219ENST00000559822 SH2D1AO60880 128 aa8.19□□□□□ -1.1
SPG11-219ENST00000559822 ARMS2P0C7Q2 107 aa8.19□□□□□ -1.1
SPG11-219ENST00000559822 TPT1P13693 172 aaKnown RBP8.19□□□□□ -1.1
SPG11-219ENST00000559822 Q6ZSN1 163 aa8.19□□□□□ -1.1
SPG11-219ENST00000559822 COX11Q9Y6N1 276 aa8.19□□□□□ -1.1
SPG11-219ENST00000559822 URGCP-MRPS24S4R325 110 aa8.19□□□□□ -1.1
SPG11-219ENST00000559822 AKR1C3P42330 323 aa8.18□□□□□ -1.1
SPG11-219ENST00000559822 RGS21Q2M5E4 152 aa8.18□□□□□ -1.1
SPG11-219ENST00000559822 LINC01559Q495D7 138 aa8.18□□□□□ -1.1
SPG11-219ENST00000559822 FAM74A4Q5TZK3 123 aa8.18□□□□□ -1.1
SPG11-219ENST00000559822 DMRTA1Q5VZB9 504 aa8.18□□□□□ -1.1
SPG11-219ENST00000559822 CST9LP1Q5W188 147 aa8.18□□□□□ -1.1
SPG11-219ENST00000559822 UFSP1Q6NVU6 142 aa8.18□□□□□ -1.1
SPG11-219ENST00000559822 ZFP82Q8N141 532 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms