RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 TNFSF18Q9UNG2 199 aa10.03□□□□□ -0.8
LRRC28-213ENST00000559399 IGLV5-52A0A0A0MRZ9 124 aa10.02□□□□□ -0.81
LRRC28-213ENST00000559399 PTTG1O95997 202 aa10.02□□□□□ -0.81
LRRC28-213ENST00000559399 RNASE3P12724 160 aaKnown RBP10.02□□□□□ -0.81
LRRC28-213ENST00000559399 Q5VSD8 79 aa10.02□□□□□ -0.81
LRRC28-213ENST00000559399 NTN5Q8WTR8 489 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-213ENST00000559399 Q9HAA7 133 aa10.02□□□□□ -0.81
LRRC28-213ENST00000559399 LRCOL1A6NCL2 159 aa10.01□□□□□ -0.81
LRRC28-213ENST00000559399 PGPEP1LA6NFU8 196 aa10.01□□□□□ -0.81
LRRC28-213ENST00000559399 INAFM2P0DMQ5 153 aa10.01□□□□□ -0.81
LRRC28-213ENST00000559399 INO80EQ8NBZ0 244 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-213ENST00000559399 ATP6V0E2Q8NHE4 81 aa10.01□□□□□ -0.81
LRRC28-213ENST00000559399 GTSF1LQ9H1H1 148 aa10.01□□□□□ -0.81
LRRC28-213ENST00000559399 A0A1W2PRE2 83 aa10□□□□□ -0.81
LRRC28-213ENST00000559399 IGHV3-30P01768 117 aa10□□□□□ -0.81
LRRC28-213ENST00000559399 IGHV3-33P01772 117 aa10□□□□□ -0.81
LRRC28-213ENST00000559399 GIPP09681 153 aaPredicted RBP10□□□□□ -0.81
LRRC28-213ENST00000559399 IGHV3-30-3P0DP02 117 aa10□□□□□ -0.81
LRRC28-213ENST00000559399 IGHV3-30-5P0DP03 117 aa10□□□□□ -0.81
LRRC28-213ENST00000559399 S100A4P26447 101 aaKnown RBP10□□□□□ -0.81
LRRC28-213ENST00000559399 Q5BKY6 102 aa10□□□□□ -0.81
LRRC28-213ENST00000559399 KRTAP3-3Q9BYR6 98 aa10□□□□□ -0.81
LRRC28-213ENST00000559399 KRTAP3-2Q9BYR7 98 aa10□□□□□ -0.81
LRRC28-213ENST00000559399 BORCS7-ASMTA0A0B4J1R7 106 aa9.99□□□□□ -0.81
LRRC28-213ENST00000559399 IGKV3D-20A0A0C4DH25 116 aa9.99□□□□□ -0.81
LRRC28-213ENST00000559399 A8MWV9 139 aa9.99□□□□□ -0.81
LRRC28-213ENST00000559399 IFNA7P01567 189 aa9.99□□□□□ -0.81
LRRC28-213ENST00000559399 ASIPP42127 132 aa9.99□□□□□ -0.81
LRRC28-213ENST00000559399 LAGE3Q14657 143 aa9.99□□□□□ -0.81
LRRC28-213ENST00000559399 RPL7L1Q6DKI1 246 aaKnown RBP9.99□□□□□ -0.81
LRRC28-213ENST00000559399 ZFP2Q6ZN57 461 aa9.99□□□□□ -0.81
LRRC28-213ENST00000559399 Q8N814 137 aa9.99□□□□□ -0.81
LRRC28-213ENST00000559399 LINC00479Q96M42 142 aa9.99□□□□□ -0.81
LRRC28-213ENST00000559399 PARLQ9H300 379 aa9.99□□□□□ -0.81
LRRC28-213ENST00000559399 BATF3Q9NR55 127 aa9.99□□□□□ -0.81
LRRC28-213ENST00000559399 ARL2-SNX15V9GYD0 113 aa9.99□□□□□ -0.81
LRRC28-213ENST00000559399 FAT1Q14517 4588 aa9.98□□□□□ -0.81
LRRC28-213ENST00000559399 TRAV34A0A0B4J273 112 aa9.98□□□□□ -0.81
LRRC28-213ENST00000559399 PIK3CD-AS1Q5SR53 167 aa9.98□□□□□ -0.81
LRRC28-213ENST00000559399 TMEM70Q9BUB7 260 aa9.98□□□□□ -0.81
LRRC28-213ENST00000559399 FXYD6-FXYD2A0A087WZ82 144 aa9.97□□□□□ -0.81
LRRC28-213ENST00000559399 CTXND1A0A1B0GTU2 59 aa9.97□□□□□ -0.81
LRRC28-213ENST00000559399 RNF222A6NCQ9 220 aa9.97□□□□□ -0.81
LRRC28-213ENST00000559399 GAGE12JA6NER3 117 aa9.97□□□□□ -0.81
LRRC28-213ENST00000559399 FABP5P3A8MUU1 101 aa9.97□□□□□ -0.81
LRRC28-213ENST00000559399 PEX7O00628 323 aa9.97□□□□□ -0.81
LRRC28-213ENST00000559399 UBE2G2P60604 165 aa9.97□□□□□ -0.81
LRRC28-213ENST00000559399 GAGE1Q13065 139 aa9.97□□□□□ -0.81
LRRC28-213ENST00000559399 GAGE4Q13068 117 aa9.97□□□□□ -0.81
LRRC28-213ENST00000559399 GAGE5Q13069 117 aa9.97□□□□□ -0.81
LRRC28-213ENST00000559399 ZNF726P1Q15940 193 aa9.97□□□□□ -0.81
LRRC28-213ENST00000559399 LGALSLQ3ZCW2 172 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-213ENST00000559399 GAGE13Q4V321 117 aa9.97□□□□□ -0.81
LRRC28-213ENST00000559399 Q6ZSN1 163 aa9.97□□□□□ -0.81
LRRC28-213ENST00000559399 Q86TA4 180 aa9.97□□□□□ -0.81
LRRC28-213ENST00000559399 TM2D2Q9BX73 214 aa9.97□□□□□ -0.81
LRRC28-213ENST00000559399 SMR3BP02814 79 aaPredicted RBP9.96□□□□□ -0.82
LRRC28-213ENST00000559399 LINC00694P0DN24 101 aa9.96□□□□□ -0.82
LRRC28-213ENST00000559399 HAMPP81172 84 aa9.96□□□□□ -0.82
LRRC28-213ENST00000559399 NKX6-2Q9C056 277 aaPredicted RBP9.96□□□□□ -0.82
LRRC28-213ENST00000559399 IL36BQ9NZH7 164 aa9.96□□□□□ -0.82
LRRC28-213ENST00000559399 HERC1Q15751 4861 aa9.96□□□□□ -0.82
LRRC28-213ENST00000559399 B4DEV8 164 aa9.95□□□□□ -0.82
LRRC28-213ENST00000559399 FAM229AH3BQW9 127 aa9.95□□□□□ -0.82
LRRC28-213ENST00000559399 Q8N3U1 123 aa9.95□□□□□ -0.82
LRRC28-213ENST00000559399 SYT8Q8NBV8 401 aa9.95□□□□□ -0.82
LRRC28-213ENST00000559399 OR2T35Q8NGX2 323 aa9.95□□□□□ -0.82
LRRC28-213ENST00000559399 HIST1H2BAQ96A08 127 aa9.95□□□□□ -0.82
LRRC28-213ENST00000559399 A0A087WWC5 75 aa9.94□□□□□ -0.82
LRRC28-213ENST00000559399 FAM74A7A6NL05 159 aa9.94□□□□□ -0.82
LRRC28-213ENST00000559399 H3BVH4 76 aa9.94□□□□□ -0.82
LRRC28-213ENST00000559399 RHODO00212 210 aa9.94□□□□□ -0.82
LRRC28-213ENST00000559399 FGF8P55075 233 aaPredicted RBP9.94□□□□□ -0.82
LRRC28-213ENST00000559399 AKR1C8PQ5T2L2 129 aa9.94□□□□□ -0.82
LRRC28-213ENST00000559399 UFSP1Q6NVU6 142 aa9.94□□□□□ -0.82
LRRC28-213ENST00000559399 ZC2HC1AQ96GY0 325 aa9.94□□□□□ -0.82
LRRC28-213ENST00000559399 SAMD10Q9BYL1 202 aa9.94□□□□□ -0.82
LRRC28-213ENST00000559399 TRAV8-3A0A0A6YYJ7 113 aa9.93□□□□□ -0.82
LRRC28-213ENST00000559399 KRBOX1C9JBD0 128 aa9.93□□□□□ -0.82
LRRC28-213ENST00000559399 M0R036 132 aa9.93□□□□□ -0.82
LRRC28-213ENST00000559399 TOR2AQ5JU69 321 aa9.93□□□□□ -0.82
LRRC28-213ENST00000559399 DMRTA1Q5VZB9 504 aa9.93□□□□□ -0.82
LRRC28-213ENST00000559399 COX8CQ7Z4L0 72 aa9.93□□□□□ -0.82
LRRC28-213ENST00000559399 OR11H4Q8NGC9 324 aa9.93□□□□□ -0.82
LRRC28-213ENST00000559399 JPT2Q9H910 190 aa9.93□□□□□ -0.82
LRRC28-213ENST00000559399 ZFP30Q9Y2G7 519 aa9.93□□□□□ -0.82
LRRC28-213ENST00000559399 MAP1LC3B2A6NCE7 125 aa9.92□□□□□ -0.82
LRRC28-213ENST00000559399 SH2D1AO60880 128 aa9.92□□□□□ -0.82
LRRC28-213ENST00000559399 ARMS2P0C7Q2 107 aa9.92□□□□□ -0.82
LRRC28-213ENST00000559399 CRIP1P50238 77 aa9.92□□□□□ -0.82
LRRC28-213ENST00000559399 DNLZQ5SXM8 178 aa9.92□□□□□ -0.82
LRRC28-213ENST00000559399 FAM162BQ5T6X4 162 aa9.92□□□□□ -0.82
LRRC28-213ENST00000559399 FAM74A4Q5TZK3 123 aa9.92□□□□□ -0.82
LRRC28-213ENST00000559399 C14orf178Q8N769 122 aaPredicted RBP9.92□□□□□ -0.82
LRRC28-213ENST00000559399 FMC1Q96HJ9 113 aa9.92□□□□□ -0.82
LRRC28-213ENST00000559399 MAP1LC3BQ9GZQ8 125 aa9.92□□□□□ -0.82
LRRC28-213ENST00000559399 Q9UF83 564 aa9.92□□□□□ -0.82
LRRC28-213ENST00000559399 GRIFINA4D1Z8 144 aa9.91□□□□□ -0.82
LRRC28-213ENST00000559399 C1QBP02746 253 aa9.91□□□□□ -0.82
LRRC28-213ENST00000559399 UBE2G1P62253 170 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms