RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 ANAPC1Q9H1A4 1944 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 NIT2Q9NQR4 276 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 MYH6P13533 1939 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 MUC22E2RYF6 1773 aaPredicted RBP2.03□□□□□ -2.08
LRRC28-212ENST00000558911 FAM208AQ9UK61 1670 aaKnown RBP2.03□□□□□ -2.08
LRRC28-212ENST00000558911 TRBV27A0A0K0K1C4 114 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 C11orf86A6NJI1 115 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 TP53I11O14683 189 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 RER1O15258 196 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 METTL15P1P0C7V9 234 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 ZNF728P0DKX0 622 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 GZMBP10144 247 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 CSRP1P21291 193 aaKnown RBP2.03□□□□□ -2.08
LRRC28-212ENST00000558911 MDKP21741 143 aaPredicted RBP2.03□□□□□ -2.08
LRRC28-212ENST00000558911 RBP2P50120 134 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 DYNLT1P63172 113 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 MYL5Q02045 173 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 KPRPQ5T749 579 aaPredicted RBP2.03□□□□□ -2.08
LRRC28-212ENST00000558911 FAM27BQ5VT28 67 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 ZNF880Q6PDB4 577 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 HAGHLQ6PII5 290 aaPredicted RBP2.03□□□□□ -2.08
LRRC28-212ENST00000558911 MMGT1Q8N4V1 131 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 ZNF418Q8TF45 676 aaPredicted RBP2.03□□□□□ -2.08
LRRC28-212ENST00000558911 NAT14Q8WUY8 206 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 AQP3Q92482 292 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 MAGOHBQ96A72 148 aaKnown RBP2.03□□□□□ -2.08
LRRC28-212ENST00000558911 S4R3C0 116 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 TRPM6Q9BX84 2022 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 ATG2AQ2TAZ0 1938 aa2.03□□□□□ -2.08
LRRC28-212ENST00000558911 FCGBPQ9Y6R7 5405 aaPredicted RBP2.02□□□□□ -2.09
LRRC28-212ENST00000558911 CADP27708 2225 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 MYO10Q9HD67 2058 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 TRAV7A0A075B6U4 112 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 IGHV3OR16-8A0A075B7F1 116 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 TRGV5A0A0B4J1U4 118 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 A0A1B0GU33 70 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 LOC100130705A0A1B0GUX0 176 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 TMEM235A6NFC5 223 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 H3BPC8 53 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 M0R129 80 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 TIMM17BO60830 172 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 NCR2O95944 276 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 TCL1BO95988 128 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 SHBGP04278 402 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 IFNA4P05014 189 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 CRYGAP11844 174 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 CD24P25063 80 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 COL8A2P25067 703 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 MRPS10P82664 201 aaKnown RBP2.02□□□□□ -2.09
LRRC28-212ENST00000558911 KRTAP25-1Q3LHN0 102 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 PATE2Q6UY27 113 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 DPPA3Q6W0C5 159 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 LYPD6Q86Y78 171 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 DYNAPQ8N1N2 210 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 C3orf56Q8N813 242 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 MORN4Q8NDC4 146 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 Q8NDZ9 215 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 OR5D16Q8NGK9 328 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 PKMYT1Q99640 499 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 TXNL4BQ9NX01 149 aaKnown RBP2.02□□□□□ -2.09
LRRC28-212ENST00000558911 TIMM9Q9Y5J7 89 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 MINOS1-NBL1R4GNA1 71 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 MUC12Q9UKN1 5478 aa2.02□□□□□ -2.09
LRRC28-212ENST00000558911 FAT3Q8TDW7 4589 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 PTPRBP23467 1997 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 MYH9P35579 1960 aaKnown RBP2.01□□□□□ -2.09
LRRC28-212ENST00000558911 RIC1Q4ADV7 1423 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 HSPG2P98160 4391 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 C4BP0C0L5 1744 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 IGLV3-12A0A075B6K2 115 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 IGLV3-9A0A075B6K5 115 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 A0A1B0GVG6 124 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 SPAARA0A1B0GVQ0 90 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 C7orf71A4D174 169 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 OR2T8A6NH00 312 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 ZNF727A8MUV8 499 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 SDCBPO00560 298 aaPredicted RBP2.01□□□□□ -2.09
LRRC28-212ENST00000558911 SLC25A5P05141 298 aaKnown RBP2.01□□□□□ -2.09
LRRC28-212ENST00000558911 NFYAP23511 347 aaPredicted RBP2.01□□□□□ -2.09
LRRC28-212ENST00000558911 GUCA1AP43080 201 aaPredicted RBP2.01□□□□□ -2.09
LRRC28-212ENST00000558911 AKR1D1P51857 326 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 FOXA3P55318 350 aaPredicted RBP2.01□□□□□ -2.09
LRRC28-212ENST00000558911 SNRPD3P62318 126 aaKnown RBP2.01□□□□□ -2.09
LRRC28-212ENST00000558911 RELAQ04206 551 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 KLRD1Q13241 179 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 ZNF181Q2M3W8 571 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 CCSMST1Q4G0I0 132 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 LYZL1Q6UWQ5 148 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 TMEM136Q6ZRR5 245 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 SLC35E3Q7Z769 313 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 OR4B1Q8NGF8 309 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 DEDD2Q8WXF8 326 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 OR8B2Q96RD0 313 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 SOX21Q9Y651 276 aaPredicted RBP2.01□□□□□ -2.09
LRRC28-212ENST00000558911 SCN9AQ15858 1988 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 MYH13Q9UKX3 1938 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 CPAMD8Q8IZJ3 1885 aa2.01□□□□□ -2.09
LRRC28-212ENST00000558911 KIF1AQ12756 1690 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 ZFC3H1O60293 1989 aaKnown RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms