RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 M0R2P5 195 aa8.3□□□□□ -1.08
TPM1-216ENST00000558910 ORM1P02763 201 aa8.3□□□□□ -1.08
TPM1-216ENST00000558910 S100A4P26447 101 aaKnown RBP8.3□□□□□ -1.08
TPM1-216ENST00000558910 CRYBA4P53673 196 aa8.3□□□□□ -1.08
TPM1-216ENST00000558910 UBE2G1P62253 170 aa8.3□□□□□ -1.08
TPM1-216ENST00000558910 ZNF345Q14585 488 aa8.3□□□□□ -1.08
TPM1-216ENST00000558910 Q86TA4 180 aa8.3□□□□□ -1.08
TPM1-216ENST00000558910 KCNS1Q96KK3 526 aa8.3□□□□□ -1.08
TPM1-216ENST00000558910 PRO0255Q9UI72 69 aa8.3□□□□□ -1.08
TPM1-216ENST00000558910 GRIFINA4D1Z8 144 aa8.29□□□□□ -1.08
TPM1-216ENST00000558910 PFN1P07737 140 aaKnown RBP8.29□□□□□ -1.08
TPM1-216ENST00000558910 GYPEP15421 78 aa8.29□□□□□ -1.08
TPM1-216ENST00000558910 AKR1C3P42330 323 aa8.29□□□□□ -1.08
TPM1-216ENST00000558910 SOHLH1Q5JUK2 328 aa8.29□□□□□ -1.08
TPM1-216ENST00000558910 ARL6IP6Q8N6S5 226 aa8.29□□□□□ -1.08
TPM1-216ENST00000558910 SYT8Q8NBV8 401 aa8.29□□□□□ -1.08
TPM1-216ENST00000558910 PCNPQ8WW12 178 aaKnown RBP8.29□□□□□ -1.08
TPM1-216ENST00000558910 PKD1P98161 4303 aa8.28□□□□□ -1.08
TPM1-216ENST00000558910 PLA2G1BP04054 148 aaKnown RBP8.28□□□□□ -1.08
TPM1-216ENST00000558910 SEC11BP0C7V7 166 aa8.28□□□□□ -1.08
TPM1-216ENST00000558910 TPT1P13693 172 aaKnown RBP8.28□□□□□ -1.08
TPM1-216ENST00000558910 TDRG1Q3Y452 100 aa8.28□□□□□ -1.08
TPM1-216ENST00000558910 ZNF876PQ49A33 203 aa8.28□□□□□ -1.08
TPM1-216ENST00000558910 SAPCD1Q5SSQ6 148 aa8.28□□□□□ -1.08
TPM1-216ENST00000558910 DPPA3Q6W0C5 159 aa8.28□□□□□ -1.08
TPM1-216ENST00000558910 LINC00336Q6ZUF6 198 aa8.28□□□□□ -1.08
TPM1-216ENST00000558910 RASL10AQ92737 203 aa8.28□□□□□ -1.08
TPM1-216ENST00000558910 ZC2HC1AQ96GY0 325 aa8.28□□□□□ -1.08
TPM1-216ENST00000558910 PKHD1P08F94 4074 aa8.27□□□□□ -1.09
TPM1-216ENST00000558910 TRAV4A0A0B4J268 109 aa8.27□□□□□ -1.09
TPM1-216ENST00000558910 PGPEP1LA6NFU8 196 aa8.27□□□□□ -1.09
TPM1-216ENST00000558910 B4DEV8 164 aa8.27□□□□□ -1.09
TPM1-216ENST00000558910 H3BVH4 76 aa8.27□□□□□ -1.09
TPM1-216ENST00000558910 K7EQD1 137 aa8.27□□□□□ -1.09
TPM1-216ENST00000558910 SH2D1AO60880 128 aa8.27□□□□□ -1.09
TPM1-216ENST00000558910 NXPH4O95158 308 aa8.27□□□□□ -1.09
TPM1-216ENST00000558910 SRIP30626 198 aa8.27□□□□□ -1.09
TPM1-216ENST00000558910 FAM3BP58499 235 aaPredicted RBP8.27□□□□□ -1.09
TPM1-216ENST00000558910 LGALSLQ3ZCW2 172 aaPredicted RBP8.27□□□□□ -1.09
TPM1-216ENST00000558910 C6orf223Q8N319 242 aa8.27□□□□□ -1.09
TPM1-216ENST00000558910 HIST1H2BAQ96A08 127 aa8.27□□□□□ -1.09
TPM1-216ENST00000558910 C18orf15Q96N68 181 aa8.27□□□□□ -1.09
TPM1-216ENST00000558910 KRTAP1-5Q9BYS1 174 aa8.27□□□□□ -1.09
TPM1-216ENST00000558910 MRPS16Q9Y3D3 137 aaKnown RBP8.27□□□□□ -1.09
TPM1-216ENST00000558910 DYNC1H1Q14204 4646 aaKnown RBP8.26□□□□□ -1.09
TPM1-216ENST00000558910 DNAH11Q96DT5 4516 aa8.26□□□□□ -1.09
TPM1-216ENST00000558910 IGKV3D-20A0A0C4DH25 116 aa8.26□□□□□ -1.09
TPM1-216ENST00000558910 FABP5P3A8MUU1 101 aa8.26□□□□□ -1.09
TPM1-216ENST00000558910 H3BNG1 76 aa8.26□□□□□ -1.09
TPM1-216ENST00000558910 ASIPP42127 132 aa8.26□□□□□ -1.09
TPM1-216ENST00000558910 CRIP1P50238 77 aa8.26□□□□□ -1.09
TPM1-216ENST00000558910 SSTP61278 116 aa8.26□□□□□ -1.09
TPM1-216ENST00000558910 EIF5AP63241 154 aaKnown RBP8.26□□□□□ -1.09
TPM1-216ENST00000558910 CCL20P78556 96 aa8.26□□□□□ -1.09
TPM1-216ENST00000558910 SLAQ13239 276 aa8.26□□□□□ -1.09
TPM1-216ENST00000558910 MRPL23Q16540 153 aaKnown RBP8.26□□□□□ -1.09
TPM1-216ENST00000558910 ZNF506Q5JVG8 444 aa8.26□□□□□ -1.09
TPM1-216ENST00000558910 NKX6-2Q9C056 277 aaPredicted RBP8.26□□□□□ -1.09
TPM1-216ENST00000558910 JPT2Q9H910 190 aa8.26□□□□□ -1.09
TPM1-216ENST00000558910 GNG13Q9P2W3 67 aa8.26□□□□□ -1.09
TPM1-216ENST00000558910 FBLL1A6NHQ2 334 aaKnown RBP8.25□□□□□ -1.09
TPM1-216ENST00000558910 UMAD1C9J7I0 102 aa8.25□□□□□ -1.09
TPM1-216ENST00000558910 RNASE3P12724 160 aaKnown RBP8.25□□□□□ -1.09
TPM1-216ENST00000558910 CFAP126Q5VTH2 177 aa8.25□□□□□ -1.09
TPM1-216ENST00000558910 PRR27Q6MZM9 219 aa8.25□□□□□ -1.09
TPM1-216ENST00000558910 LYPD5Q6UWN5 251 aa8.25□□□□□ -1.09
TPM1-216ENST00000558910 Q6ZNX1 250 aa8.25□□□□□ -1.09
TPM1-216ENST00000558910 MBD3L1Q8WWY6 194 aa8.25□□□□□ -1.09
TPM1-216ENST00000558910 FMC1Q96HJ9 113 aa8.25□□□□□ -1.09
TPM1-216ENST00000558910 TNFRSF18Q9Y5U5 241 aa8.25□□□□□ -1.09
TPM1-216ENST00000558910 A0A1B0GVY2 172 aa8.24□□□□□ -1.09
TPM1-216ENST00000558910 SIVA1O15304 175 aa8.24□□□□□ -1.09
TPM1-216ENST00000558910 RPL19P84098 196 aaKnown RBP8.24□□□□□ -1.09
TPM1-216ENST00000558910 FAM162BQ5T6X4 162 aa8.24□□□□□ -1.09
TPM1-216ENST00000558910 NEGR1Q7Z3B1 354 aa8.24□□□□□ -1.09
TPM1-216ENST00000558910 AKAP14Q86UN6 197 aa8.24□□□□□ -1.09
TPM1-216ENST00000558910 C9orf85Q96MD7 179 aa8.24□□□□□ -1.09
TPM1-216ENST00000558910 MUC21A0A0G2JKD1 596 aa8.23□□□□□ -1.09
TPM1-216ENST00000558910 MUC21A0A140T8X8 626 aa8.23□□□□□ -1.09
TPM1-216ENST00000558910 RS1O15537 224 aa8.23□□□□□ -1.09
TPM1-216ENST00000558910 ARMS2P0C7Q2 107 aa8.23□□□□□ -1.09
TPM1-216ENST00000558910 GATA1P15976 413 aaPredicted RBP8.23□□□□□ -1.09
TPM1-216ENST00000558910 FAM74A4Q5TZK3 123 aa8.23□□□□□ -1.09
TPM1-216ENST00000558910 ZNF575Q86XF7 245 aa8.23□□□□□ -1.09
TPM1-216ENST00000558910 WFDC10BQ8IUB3 73 aa8.23□□□□□ -1.09
TPM1-216ENST00000558910 TCTE3Q8IZS6 198 aa8.23□□□□□ -1.09
TPM1-216ENST00000558910 SLC25A29Q8N8R3 303 aa8.23□□□□□ -1.09
TPM1-216ENST00000558910 HERC2O95714 4834 aa8.22□□□□□ -1.09
TPM1-216ENST00000558910 KRBOX1C9JBD0 128 aa8.22□□□□□ -1.09
TPM1-216ENST00000558910 M0R381 172 aa8.22□□□□□ -1.09
TPM1-216ENST00000558910 TTC32Q5I0X7 151 aa8.22□□□□□ -1.09
TPM1-216ENST00000558910 BAGE2Q86Y30 109 aa8.22□□□□□ -1.09
TPM1-216ENST00000558910 TXNDC17Q9BRA2 123 aa8.22□□□□□ -1.09
TPM1-216ENST00000558910 UPK3BQ9BT76 320 aa8.22□□□□□ -1.09
TPM1-216ENST00000558910 SAMD10Q9BYL1 202 aa8.22□□□□□ -1.09
TPM1-216ENST00000558910 ZFP30Q9Y2G7 519 aa8.22□□□□□ -1.09
TPM1-216ENST00000558910 KIAA1109Q2LD37 5005 aa8.21□□□□□ -1.1
TPM1-216ENST00000558910 A0A087WWL8 130 aa8.21□□□□□ -1.1
TPM1-216ENST00000558910 GAGE12JA6NER3 117 aa8.21□□□□□ -1.1
TPM1-216ENST00000558910 LTAP01374 205 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms