RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 GATA1P15976 413 aaPredicted RBP6.38□□□□□ -1.39
SPG11-212ENST00000558790 PVALBP20472 110 aaPredicted RBP6.38□□□□□ -1.39
SPG11-212ENST00000558790 TWIST1Q15672 202 aa6.38□□□□□ -1.39
SPG11-212ENST00000558790 FAM159AQ6UWV7 190 aa6.38□□□□□ -1.39
SPG11-212ENST00000558790 SH2D6Q7Z4S9 175 aa6.38□□□□□ -1.39
SPG11-212ENST00000558790 DEFB104AQ8WTQ1 72 aa6.38□□□□□ -1.39
SPG11-212ENST00000558790 SEC22CQ9BRL7 303 aa6.38□□□□□ -1.39
SPG11-212ENST00000558790 PAXXQ9BUH6 204 aa6.38□□□□□ -1.39
SPG11-212ENST00000558790 OR51M1Q9H341 326 aa6.38□□□□□ -1.39
SPG11-212ENST00000558790 TRAV6A0A075B6T7 132 aa6.37□□□□□ -1.39
SPG11-212ENST00000558790 TRAV8-6A0A0B4J262 113 aa6.37□□□□□ -1.39
SPG11-212ENST00000558790 M0R2P5 195 aa6.37□□□□□ -1.39
SPG11-212ENST00000558790 LECT2O14960 151 aa6.37□□□□□ -1.39
SPG11-212ENST00000558790 OR7C2O60412 319 aa6.37□□□□□ -1.39
SPG11-212ENST00000558790 IL7P13232 177 aa6.37□□□□□ -1.39
SPG11-212ENST00000558790 CSN1S1P47710 185 aa6.37□□□□□ -1.39
SPG11-212ENST00000558790 LAGE3Q14657 143 aa6.37□□□□□ -1.39
SPG11-212ENST00000558790 TDRG1Q3Y452 100 aa6.37□□□□□ -1.39
SPG11-212ENST00000558790 OR10J3Q5JRS4 329 aa6.37□□□□□ -1.39
SPG11-212ENST00000558790 C2orf50Q96LR7 162 aa6.37□□□□□ -1.39
SPG11-212ENST00000558790 FAT4Q6V0I7 4981 aa6.37□□□□□ -1.39
SPG11-212ENST00000558790 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.36□□□□□ -1.39
SPG11-212ENST00000558790 FBLL1A6NHQ2 334 aaKnown RBP6.36□□□□□ -1.39
SPG11-212ENST00000558790 GNRH2O43555 120 aa6.36□□□□□ -1.39
SPG11-212ENST00000558790 TYMSP04818 313 aa6.36□□□□□ -1.39
SPG11-212ENST00000558790 KRTAP10-4P60372 401 aaPredicted RBP6.36□□□□□ -1.39
SPG11-212ENST00000558790 RANP62826 216 aaKnown RBP6.36□□□□□ -1.39
SPG11-212ENST00000558790 UBE2L3P68036 154 aaKnown RBP6.36□□□□□ -1.39
SPG11-212ENST00000558790 IL15RAQ13261 267 aa6.36□□□□□ -1.39
SPG11-212ENST00000558790 ATP6V1FQ16864 119 aa6.36□□□□□ -1.39
SPG11-212ENST00000558790 LINC01620Q4KN68 170 aa6.36□□□□□ -1.39
SPG11-212ENST00000558790 SCXQ7RTU7 201 aa6.36□□□□□ -1.39
SPG11-212ENST00000558790 SLC25A29Q8N8R3 303 aa6.36□□□□□ -1.39
SPG11-212ENST00000558790 OR5C1Q8NGR4 320 aa6.36□□□□□ -1.39
SPG11-212ENST00000558790 NUDT15Q9NV35 164 aa6.36□□□□□ -1.39
SPG11-212ENST00000558790 LENEPQ9Y5L5 61 aa6.36□□□□□ -1.39
SPG11-212ENST00000558790 F6UZH7 168 aa6.35□□□□□ -1.39
SPG11-212ENST00000558790 PLA2G10O15496 165 aa6.35□□□□□ -1.39
SPG11-212ENST00000558790 RHOHQ15669 191 aa6.35□□□□□ -1.39
SPG11-212ENST00000558790 CNPY1Q3B7I2 92 aa6.35□□□□□ -1.39
SPG11-212ENST00000558790 LELP1Q5T871 98 aa6.35□□□□□ -1.39
SPG11-212ENST00000558790 RPH3ALQ9UNE2 315 aa6.35□□□□□ -1.39
SPG11-212ENST00000558790 IGHV3-73A0A0B4J1V6 119 aa6.34□□□□□ -1.39
SPG11-212ENST00000558790 LYRM1O43325 122 aa6.34□□□□□ -1.39
SPG11-212ENST00000558790 TCRBP04435 133 aa6.34□□□□□ -1.39
SPG11-212ENST00000558790 PFN1P07737 140 aaKnown RBP6.34□□□□□ -1.39
SPG11-212ENST00000558790 DPPA3Q6W0C5 159 aa6.34□□□□□ -1.39
SPG11-212ENST00000558790 TMED6Q8WW62 240 aa6.34□□□□□ -1.39
SPG11-212ENST00000558790 HYLS1Q96M11 299 aa6.34□□□□□ -1.39
SPG11-212ENST00000558790 PRADC1Q9BSG0 188 aa6.34□□□□□ -1.39
SPG11-212ENST00000558790 WDR61Q9GZS3 305 aaKnown RBP6.34□□□□□ -1.39
SPG11-212ENST00000558790 SDF2L1Q9HCN8 221 aa6.34□□□□□ -1.39
SPG11-212ENST00000558790 KCNIP2Q9NS61 270 aa6.34□□□□□ -1.39
SPG11-212ENST00000558790 TRAV8-1A0A0A6YYK1 113 aa6.33□□□□□ -1.4
SPG11-212ENST00000558790 TRAV21A0A0B4J279 112 aa6.33□□□□□ -1.4
SPG11-212ENST00000558790 TRBV6-4A0A1B0GX49 114 aa6.33□□□□□ -1.4
SPG11-212ENST00000558790 EIF3GO75821 320 aaKnown RBP eCLIP6.33□□□□□ -1.4
SPG11-212ENST00000558790 KHDC3LQ587J8 217 aa6.33□□□□□ -1.4
SPG11-212ENST00000558790 CFAP126Q5VTH2 177 aa6.33□□□□□ -1.4
SPG11-212ENST00000558790 ASB13Q8WXK3 278 aa6.33□□□□□ -1.4
SPG11-212ENST00000558790 TVP23CQ96ET8 276 aa6.33□□□□□ -1.4
SPG11-212ENST00000558790 GTSF1LQ9H1H1 148 aa6.33□□□□□ -1.4
SPG11-212ENST00000558790 RS1O15537 224 aa6.32□□□□□ -1.4
SPG11-212ENST00000558790 LINC00694P0DN24 101 aa6.32□□□□□ -1.4
SPG11-212ENST00000558790 ZNF876PQ49A33 203 aa6.32□□□□□ -1.4
SPG11-212ENST00000558790 GOLT1AQ6ZVE7 132 aa6.32□□□□□ -1.4
SPG11-212ENST00000558790 PRR26Q8N8Z3 221 aa6.32□□□□□ -1.4
SPG11-212ENST00000558790 ATP6V0E2Q8NHE4 81 aa6.32□□□□□ -1.4
SPG11-212ENST00000558790 ATP5SQ99766 215 aa6.32□□□□□ -1.4
SPG11-212ENST00000558790 OTORQ9NRC9 128 aa6.32□□□□□ -1.4
SPG11-212ENST00000558790 OR5AC2Q9NZP5 309 aa6.32□□□□□ -1.4
SPG11-212ENST00000558790 ASIPP42127 132 aa6.31□□□□□ -1.4
SPG11-212ENST00000558790 GNG5P63218 68 aa6.31□□□□□ -1.4
SPG11-212ENST00000558790 LRRC37A5PQ49AS3 106 aa6.31□□□□□ -1.4
SPG11-212ENST00000558790 ZNF506Q5JVG8 444 aa6.31□□□□□ -1.4
SPG11-212ENST00000558790 FFAR4Q5NUL3 377 aa6.31□□□□□ -1.4
SPG11-212ENST00000558790 DAZ4Q86SG3 579 aaKnown RBP6.31□□□□□ -1.4
SPG11-212ENST00000558790 NEXN-AS1Q8NBZ9 246 aa6.31□□□□□ -1.4
SPG11-212ENST00000558790 CMTM2Q8TAZ6 248 aa6.31□□□□□ -1.4
SPG11-212ENST00000558790 BAALCQ8WXS3 180 aa6.31□□□□□ -1.4
SPG11-212ENST00000558790 KCNS1Q96KK3 526 aa6.31□□□□□ -1.4
SPG11-212ENST00000558790 CHAC1Q9BUX1 264 aa6.31□□□□□ -1.4
SPG11-212ENST00000558790 TREM1Q9NP99 234 aa6.31□□□□□ -1.4
SPG11-212ENST00000558790 DAZ3Q9NR90 486 aaKnown RBP6.31□□□□□ -1.4
SPG11-212ENST00000558790 TRAV8-3A0A0A6YYJ7 113 aa6.3□□□□□ -1.4
SPG11-212ENST00000558790 PGPA6NDG6 321 aa6.3□□□□□ -1.4
SPG11-212ENST00000558790 C17orf112F2Z3M2 114 aa6.3□□□□□ -1.4
SPG11-212ENST00000558790 SIX6O95475 246 aa6.3□□□□□ -1.4
SPG11-212ENST00000558790 OXTP01178 125 aa6.3□□□□□ -1.4
SPG11-212ENST00000558790 MGST1P10620 155 aaKnown RBP6.3□□□□□ -1.4
SPG11-212ENST00000558790 TAS2R45P59539 299 aa6.3□□□□□ -1.4
SPG11-212ENST00000558790 TMEM75Q8N9X5 138 aa6.3□□□□□ -1.4
SPG11-212ENST00000558790 CIRBP-AS1Q8TBR5 109 aa6.3□□□□□ -1.4
SPG11-212ENST00000558790 DNAJC30Q96LL9 226 aa6.3□□□□□ -1.4
SPG11-212ENST00000558790 C9orf85Q96MD7 179 aa6.3□□□□□ -1.4
SPG11-212ENST00000558790 NMES1Q9C002 83 aa6.3□□□□□ -1.4
SPG11-212ENST00000558790 RBFOX3A6NFN3 312 aa6.29□□□□□ -1.4
SPG11-212ENST00000558790 PGPEP1LA6NFU8 196 aa6.29□□□□□ -1.4
SPG11-212ENST00000558790 CIDEAO60543 219 aa6.29□□□□□ -1.4
SPG11-212ENST00000558790 ZNF80P51504 273 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms