RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 IGHV3-30-5P0DP03 117 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 ORM2P19652 201 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 IGHV1-2P23083 117 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 ID1P41134 155 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 FXYD7P58549 80 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 ERCC8Q13216 396 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 EBI3Q14213 229 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 HES1Q14469 280 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 EDDM3AQ14507 147 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 LAGE3Q14657 143 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 LPAL2Q16609 132 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 TTC32Q5I0X7 151 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 TEX36Q5VZQ5 186 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 ZFP2Q6ZN57 461 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 Q6ZS52 159 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 EXOC3-AS1Q8N2X6 119 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 POM121L12Q8N7R1 296 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 SLC25A29Q8N8R3 303 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 TOMM6Q96B49 74 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 FLYWCH2Q96CP2 140 aaKnown RBP2.4□□□□□ -2.03
HERC1-203ENST00000558532 GAFA1Q96PS6 74 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 AMELXQ99217 191 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 SMIM2Q9BVW6 85 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 PPDPFQ9H3Y8 114 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 HEATR1Q9H583 2144 aaKnown RBP2.4□□□□□ -2.03
HERC1-203ENST00000558532 ONECUT1Q9UBC0 465 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 FZR1Q9UM11 496 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 TIMM8BQ9Y5J9 83 aaPredicted RBP2.4□□□□□ -2.03
HERC1-203ENST00000558532 PI4KAP42356 2102 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 DOCK10Q96BY6 2186 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 CACNA1EQ15878 2313 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 KNL1Q8NG31 2342 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 IGLV3-9A0A075B6K5 115 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 A0A0J9YX75 114 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 TRBV30A0A0K0K1B3 111 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 TRBV10-2A0A0K0K1G8 114 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 RBAKDNA6NC62 111 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 SMIM9A6NGZ8 99 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 IGHV3-33P01772 117 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 PSMB2P49721 201 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 ZNF80P51504 273 aaPredicted RBP2.39□□□□□ -2.03
HERC1-203ENST00000558532 TNFAIP6P98066 277 aaPredicted RBP2.39□□□□□ -2.03
HERC1-203ENST00000558532 VMA21Q3ZAQ7 101 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 LINC01620Q4KN68 170 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 ORMDL2Q53FV1 153 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 MEIG1Q5JSS6 88 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 C10orf55Q5SWW7 151 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 TMEM170BQ5T4T1 132 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 GUSBP11Q6P575 273 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 Q6ZQT7 251 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 Q6ZT83 130 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 ZNF491Q8N8L2 437 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 C15orf53Q8NAA6 179 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 ZNRF1Q8ND25 227 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 ZNRF2Q8NHG8 242 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 FAM57AQ8TBR7 257 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 TMEM263Q8WUH6 116 aaKnown RBP2.39□□□□□ -2.03
HERC1-203ENST00000558532 PLEKHB2Q96CS7 222 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 LINC00526Q96FQ7 95 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 SLC50A1Q9BRV3 221 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 PRADC1Q9BSG0 188 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 TTTY12Q9BZ98 90 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 AGPAT4-IT1Q9H0P7 198 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 PRO1854Q9UHT4 67 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 CHD9Q3L8U1 2897 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 SDK2Q58EX2 2172 aa2.39□□□□□ -2.03
HERC1-203ENST00000558532 UTRNP46939 3433 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 IGLV4-69A0A075B6H9 119 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 TRAV8-2A0A0B4J237 113 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 TRAV8-4A0A0B4J246 113 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 LOC107984156A0A0G2JMH3 177 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 IGHV7-4-1A0A0J9YVY3 117 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 A4D1N5 150 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 SDHAF1A6NFY7 115 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 C11orf86A6NJI1 115 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 ZNF815PA8K554 130 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 H3BMM0 161 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 H3BTX0 84 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 J3KT08 172 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 K7EIM0 57 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 M0R3E3 92 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 UQCRQO14949 82 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 TRANK1O15050 2925 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 TIMM8AO60220 97 aaPredicted RBP2.38□□□□□ -2.03
HERC1-203ENST00000558532 NDUFA7O95182 113 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 ACYP1P07311 99 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 CRYGDP07320 174 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 CECR9P0C854 216 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 CRYGAP11844 174 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 CXCL5P42830 114 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 MAGEA5P43359 124 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 RPL27AP46776 148 aaKnown RBP2.38□□□□□ -2.03
HERC1-203ENST00000558532 DLX6P56179 175 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 LYZP61626 148 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 HIST1H4AP62805 103 aaKnown RBP2.38□□□□□ -2.03
HERC1-203ENST00000558532 KLK9Q2XQG4 91 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 LCE3CQ5T5A8 94 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 ARL17AQ8IVW1 177 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 MDS2Q8NDY4 140 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 SAP25Q8TEE9 199 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms