RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 KRTAP4-5Q9BYR2 181 aa8.09□□□□□ -1.11
HERC1-202ENST00000558324 MSRB1Q9NZV6 116 aa8.09□□□□□ -1.11
HERC1-202ENST00000558324 A0A1B0GV50 99 aa8.08□□□□□ -1.12
HERC1-202ENST00000558324 FABP5P3A8MUU1 101 aa8.08□□□□□ -1.12
HERC1-202ENST00000558324 M0R036 132 aa8.08□□□□□ -1.12
HERC1-202ENST00000558324 CRYGDP07320 174 aa8.08□□□□□ -1.12
HERC1-202ENST00000558324 ASIPP42127 132 aa8.08□□□□□ -1.12
HERC1-202ENST00000558324 CST9LP1Q5W188 147 aa8.08□□□□□ -1.12
HERC1-202ENST00000558324 SH2D6Q7Z4S9 175 aa8.08□□□□□ -1.12
HERC1-202ENST00000558324 NFE4Q86UQ8 179 aa8.08□□□□□ -1.12
HERC1-202ENST00000558324 MAPKAPK5-AS1Q8N8E1 139 aa8.08□□□□□ -1.12
HERC1-202ENST00000558324 HIST1H2BAQ96A08 127 aa8.08□□□□□ -1.12
HERC1-202ENST00000558324 ZC2HC1AQ96GY0 325 aa8.08□□□□□ -1.12
HERC1-202ENST00000558324 APOBP04114 4563 aaKnown RBP8.08□□□□□ -1.12
HERC1-202ENST00000558324 DNAH5Q8TE73 4624 aa8.08□□□□□ -1.12
HERC1-202ENST00000558324 TRBV6-4A0A1B0GX49 114 aa8.07□□□□□ -1.12
HERC1-202ENST00000558324 B4DEV8 164 aa8.07□□□□□ -1.12
HERC1-202ENST00000558324 H3BVH4 76 aa8.07□□□□□ -1.12
HERC1-202ENST00000558324 EREGO14944 169 aa8.07□□□□□ -1.12
HERC1-202ENST00000558324 UBE2G1P62253 170 aa8.07□□□□□ -1.12
HERC1-202ENST00000558324 LGALSLQ3ZCW2 172 aaPredicted RBP8.07□□□□□ -1.12
HERC1-202ENST00000558324 OR10J3Q5JRS4 329 aa8.07□□□□□ -1.12
HERC1-202ENST00000558324 KCNRGQ8N5I3 272 aa8.07□□□□□ -1.12
HERC1-202ENST00000558324 STOML3Q8TAV4 291 aa8.07□□□□□ -1.12
HERC1-202ENST00000558324 NKX6-2Q9C056 277 aaPredicted RBP8.07□□□□□ -1.12
HERC1-202ENST00000558324 PARLQ9H300 379 aa8.07□□□□□ -1.12
HERC1-202ENST00000558324 ABCA13Q86UQ4 5058 aa8.07□□□□□ -1.12
HERC1-202ENST00000558324 TMSB15BA0A087X1C1 80 aa8.06□□□□□ -1.12
HERC1-202ENST00000558324 IGHV3-38A0A0C4DH36 116 aa8.06□□□□□ -1.12
HERC1-202ENST00000558324 GRIFINA4D1Z8 144 aa8.06□□□□□ -1.12
HERC1-202ENST00000558324 SH2D1AO60880 128 aa8.06□□□□□ -1.12
HERC1-202ENST00000558324 MGST1P10620 155 aaKnown RBP8.06□□□□□ -1.12
HERC1-202ENST00000558324 Q6ZSN1 163 aa8.06□□□□□ -1.12
HERC1-202ENST00000558324 OR11H4Q8NGC9 324 aa8.06□□□□□ -1.12
HERC1-202ENST00000558324 FAM213BQ8TBF2 198 aa8.06□□□□□ -1.12
HERC1-202ENST00000558324 ZNF471Q9BX82 626 aaPredicted RBP8.06□□□□□ -1.12
HERC1-202ENST00000558324 A0A087WTM6 91 aa8.05□□□□□ -1.12
HERC1-202ENST00000558324 TRAV8-6A0A0B4J262 113 aa8.05□□□□□ -1.12
HERC1-202ENST00000558324 CIDEAO60543 219 aa8.05□□□□□ -1.12
HERC1-202ENST00000558324 PAGE4O60829 102 aa8.05□□□□□ -1.12
HERC1-202ENST00000558324 IGHV3-30P01768 117 aa8.05□□□□□ -1.12
HERC1-202ENST00000558324 IGHV3-33P01772 117 aa8.05□□□□□ -1.12
HERC1-202ENST00000558324 IGHV3-30-3P0DP02 117 aa8.05□□□□□ -1.12
HERC1-202ENST00000558324 IGHV3-30-5P0DP03 117 aa8.05□□□□□ -1.12
HERC1-202ENST00000558324 AKR1C3P42330 323 aa8.05□□□□□ -1.12
HERC1-202ENST00000558324 CRIP1P50238 77 aa8.05□□□□□ -1.12
HERC1-202ENST00000558324 TIRAPP58753 221 aa8.05□□□□□ -1.12
HERC1-202ENST00000558324 ZNF345Q14585 488 aa8.05□□□□□ -1.12
HERC1-202ENST00000558324 C10orf126Q8N4M7 172 aa8.05□□□□□ -1.12
HERC1-202ENST00000558324 PTH2Q96A98 100 aa8.05□□□□□ -1.12
HERC1-202ENST00000558324 FMC1Q96HJ9 113 aa8.05□□□□□ -1.12
HERC1-202ENST00000558324 SAMD10Q9BYL1 202 aa8.05□□□□□ -1.12
HERC1-202ENST00000558324 JPT2Q9H910 190 aa8.05□□□□□ -1.12
HERC1-202ENST00000558324 ZFP30Q9Y2G7 519 aa8.05□□□□□ -1.12
HERC1-202ENST00000558324 KANTRA0A1W2PQU2 76 aa8.04□□□□□ -1.12
HERC1-202ENST00000558324 GAGE12JA6NER3 117 aa8.04□□□□□ -1.12
HERC1-202ENST00000558324 A8MWV9 139 aa8.04□□□□□ -1.12
HERC1-202ENST00000558324 KRBOX1C9JBD0 128 aa8.04□□□□□ -1.12
HERC1-202ENST00000558324 K7EP13 123 aa8.04□□□□□ -1.12
HERC1-202ENST00000558324 ARMS2P0C7Q2 107 aa8.04□□□□□ -1.12
HERC1-202ENST00000558324 GAGE1Q13065 139 aa8.04□□□□□ -1.12
HERC1-202ENST00000558324 GAGE4Q13068 117 aa8.04□□□□□ -1.12
HERC1-202ENST00000558324 GAGE5Q13069 117 aa8.04□□□□□ -1.12
HERC1-202ENST00000558324 GAGE13Q4V321 117 aa8.04□□□□□ -1.12
HERC1-202ENST00000558324 FAM162BQ5T6X4 162 aa8.04□□□□□ -1.12
HERC1-202ENST00000558324 ATP6V0E2Q8NHE4 81 aa8.04□□□□□ -1.12
HERC1-202ENST00000558324 SFT2D1Q8WV19 159 aa8.04□□□□□ -1.12
HERC1-202ENST00000558324 Q9HAA7 133 aa8.04□□□□□ -1.12
HERC1-202ENST00000558324 IL36BQ9NZH7 164 aa8.04□□□□□ -1.12
HERC1-202ENST00000558324 M0R381 172 aa8.03□□□□□ -1.12
HERC1-202ENST00000558324 BCL2L11O43521 198 aa8.03□□□□□ -1.12
HERC1-202ENST00000558324 PSCAO43653 123 aa8.03□□□□□ -1.12
HERC1-202ENST00000558324 LTAP01374 205 aa8.03□□□□□ -1.12
HERC1-202ENST00000558324 SEC11BP0C7V7 166 aa8.03□□□□□ -1.12
HERC1-202ENST00000558324 LINC01556Q5JQF7 62 aa8.03□□□□□ -1.12
HERC1-202ENST00000558324 LELP1Q5T871 98 aa8.03□□□□□ -1.12
HERC1-202ENST00000558324 FAM74A4Q5TZK3 123 aa8.03□□□□□ -1.12
HERC1-202ENST00000558324 DMRTA1Q5VZB9 504 aa8.03□□□□□ -1.12
HERC1-202ENST00000558324 C14orf178Q8N769 122 aaPredicted RBP8.03□□□□□ -1.12
HERC1-202ENST00000558324 SYT8Q8NBV8 401 aa8.03□□□□□ -1.12
HERC1-202ENST00000558324 TCEAL7Q9BRU2 100 aa8.03□□□□□ -1.12
HERC1-202ENST00000558324 GTSF1LQ9H1H1 148 aa8.03□□□□□ -1.12
HERC1-202ENST00000558324 PGPEP1Q9NXJ5 209 aa8.03□□□□□ -1.12
HERC1-202ENST00000558324 Q9UF83 564 aa8.03□□□□□ -1.12
HERC1-202ENST00000558324 A0A087WWL8 130 aa8.02□□□□□ -1.13
HERC1-202ENST00000558324 A0A0D9SG52 128 aa8.02□□□□□ -1.13
HERC1-202ENST00000558324 SCO2A0A1W2PP80 73 aa8.02□□□□□ -1.13
HERC1-202ENST00000558324 HMSDA8MTL9 139 aa8.02□□□□□ -1.13
HERC1-202ENST00000558324 UMAD1C9J7I0 102 aa8.02□□□□□ -1.13
HERC1-202ENST00000558324 PFDN1O60925 122 aa8.02□□□□□ -1.13
HERC1-202ENST00000558324 TPT1P13693 172 aaKnown RBP8.02□□□□□ -1.13
HERC1-202ENST00000558324 ZNF674Q2M3X9 581 aa8.02□□□□□ -1.13
HERC1-202ENST00000558324 ZFP2Q6ZN57 461 aa8.02□□□□□ -1.13
HERC1-202ENST00000558324 Q8N3U1 123 aa8.02□□□□□ -1.13
HERC1-202ENST00000558324 SCRT2Q9NQ03 307 aa8.02□□□□□ -1.13
HERC1-202ENST00000558324 PHLDA3Q9Y5J5 127 aa8.02□□□□□ -1.13
HERC1-202ENST00000558324 TRBV6-1A0A0K0K1D8 114 aa8.01□□□□□ -1.13
HERC1-202ENST00000558324 LINC01559Q495D7 138 aa8.01□□□□□ -1.13
HERC1-202ENST00000558324 PIK3CD-AS1Q5SR53 167 aa8.01□□□□□ -1.13
HERC1-202ENST00000558324 UFSP1Q6NVU6 142 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms