RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 ZNF80P51504 273 aaPredicted RBP9.16□□□□□ -0.94
SNRPA1-204ENST00000558020 KRTAP10-1P60331 282 aa9.16□□□□□ -0.94
SNRPA1-204ENST00000558020 LELP1Q5T871 98 aa9.16□□□□□ -0.94
SNRPA1-204ENST00000558020 ATP6V0E2Q8NHE4 81 aa9.16□□□□□ -0.94
SNRPA1-204ENST00000558020 C9orf85Q96MD7 179 aa9.16□□□□□ -0.94
SNRPA1-204ENST00000558020 TM2D2Q9BX73 214 aa9.16□□□□□ -0.94
SNRPA1-204ENST00000558020 NKX6-2Q9C056 277 aaPredicted RBP9.16□□□□□ -0.94
SNRPA1-204ENST00000558020 GTSF1LQ9H1H1 148 aa9.16□□□□□ -0.94
SNRPA1-204ENST00000558020 IGLV5-52A0A0A0MRZ9 124 aa9.15□□□□□ -0.94
SNRPA1-204ENST00000558020 IGHV3-73A0A0B4J1V6 119 aa9.15□□□□□ -0.94
SNRPA1-204ENST00000558020 FABP5P3A8MUU1 101 aa9.15□□□□□ -0.94
SNRPA1-204ENST00000558020 A8MWV9 139 aa9.15□□□□□ -0.94
SNRPA1-204ENST00000558020 FAM229AH3BQW9 127 aa9.15□□□□□ -0.94
SNRPA1-204ENST00000558020 IGLV2-11P01706 119 aa9.15□□□□□ -0.94
SNRPA1-204ENST00000558020 ZNF506Q5JVG8 444 aa9.15□□□□□ -0.94
SNRPA1-204ENST00000558020 PIK3CD-AS1Q5SR53 167 aa9.15□□□□□ -0.94
SNRPA1-204ENST00000558020 ZFP2Q6ZN57 461 aa9.15□□□□□ -0.94
SNRPA1-204ENST00000558020 C11orf21Q9P2W6 132 aa9.15□□□□□ -0.94
SNRPA1-204ENST00000558020 PGPEP1LA6NFU8 196 aa9.14□□□□□ -0.95
SNRPA1-204ENST00000558020 GGTLC3B5MD39 225 aa9.14□□□□□ -0.95
SNRPA1-204ENST00000558020 LAGE3Q14657 143 aa9.14□□□□□ -0.95
SNRPA1-204ENST00000558020 Q9HAA7 133 aa9.14□□□□□ -0.95
SNRPA1-204ENST00000558020 A0A087WWC5 75 aa9.13□□□□□ -0.95
SNRPA1-204ENST00000558020 LRCOL1A6NCL2 159 aa9.13□□□□□ -0.95
SNRPA1-204ENST00000558020 IGHV3-30P01768 117 aa9.13□□□□□ -0.95
SNRPA1-204ENST00000558020 IGHV3-33P01772 117 aa9.13□□□□□ -0.95
SNRPA1-204ENST00000558020 IGHV3-30-3P0DP02 117 aa9.13□□□□□ -0.95
SNRPA1-204ENST00000558020 IGHV3-30-5P0DP03 117 aa9.13□□□□□ -0.95
SNRPA1-204ENST00000558020 ASIPP42127 132 aa9.13□□□□□ -0.95
SNRPA1-204ENST00000558020 FGF8P55075 233 aaPredicted RBP9.13□□□□□ -0.95
SNRPA1-204ENST00000558020 LGALSLQ3ZCW2 172 aaPredicted RBP9.13□□□□□ -0.95
SNRPA1-204ENST00000558020 Q5VSD8 79 aa9.13□□□□□ -0.95
SNRPA1-204ENST00000558020 DPPA3Q6W0C5 159 aa9.13□□□□□ -0.95
SNRPA1-204ENST00000558020 TMEM70Q9BUB7 260 aa9.13□□□□□ -0.95
SNRPA1-204ENST00000558020 TRAV8-3A0A0A6YYJ7 113 aa9.12□□□□□ -0.95
SNRPA1-204ENST00000558020 GIPP09681 153 aaPredicted RBP9.12□□□□□ -0.95
SNRPA1-204ENST00000558020 RNASE3P12724 160 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-204ENST00000558020 TOR2AQ5JU69 321 aa9.12□□□□□ -0.95
SNRPA1-204ENST00000558020 Q8N814 137 aa9.12□□□□□ -0.95
SNRPA1-204ENST00000558020 SYT8Q8NBV8 401 aa9.12□□□□□ -0.95
SNRPA1-204ENST00000558020 HIST1H2BAQ96A08 127 aa9.12□□□□□ -0.95
SNRPA1-204ENST00000558020 CTXND1A0A1B0GTU2 59 aa9.11□□□□□ -0.95
SNRPA1-204ENST00000558020 LINC00479Q96M42 142 aa9.11□□□□□ -0.95
SNRPA1-204ENST00000558020 IL36BQ9NZH7 164 aa9.11□□□□□ -0.95
SNRPA1-204ENST00000558020 ARL2-SNX15V9GYD0 113 aa9.11□□□□□ -0.95
SNRPA1-204ENST00000558020 TRAV34A0A0B4J273 112 aa9.1□□□□□ -0.95
SNRPA1-204ENST00000558020 IGKV3D-20A0A0C4DH25 116 aa9.1□□□□□ -0.95
SNRPA1-204ENST00000558020 B4DEV8 164 aa9.1□□□□□ -0.95
SNRPA1-204ENST00000558020 RHODO00212 210 aa9.1□□□□□ -0.95
SNRPA1-204ENST00000558020 SEC11BP0C7V7 166 aa9.1□□□□□ -0.95
SNRPA1-204ENST00000558020 RGS21Q2M5E4 152 aa9.1□□□□□ -0.95
SNRPA1-204ENST00000558020 AKR1C8PQ5T2L2 129 aa9.1□□□□□ -0.95
SNRPA1-204ENST00000558020 RPL7L1Q6DKI1 246 aaKnown RBP9.1□□□□□ -0.95
SNRPA1-204ENST00000558020 OR2T35Q8NGX2 323 aa9.1□□□□□ -0.95
SNRPA1-204ENST00000558020 PARLQ9H300 379 aa9.1□□□□□ -0.95
SNRPA1-204ENST00000558020 ZFP30Q9Y2G7 519 aa9.1□□□□□ -0.95
SNRPA1-204ENST00000558020 COX11Q9Y6N1 276 aa9.1□□□□□ -0.95
SNRPA1-204ENST00000558020 URGCP-MRPS24S4R325 110 aa9.1□□□□□ -0.95
SNRPA1-204ENST00000558020 FXYD6-FXYD2A0A087WZ82 144 aa9.09□□□□□ -0.95
SNRPA1-204ENST00000558020 GAGE12JA6NER3 117 aa9.09□□□□□ -0.95
SNRPA1-204ENST00000558020 PEX7O00628 323 aa9.09□□□□□ -0.95
SNRPA1-204ENST00000558020 C1QBP02746 253 aa9.09□□□□□ -0.95
SNRPA1-204ENST00000558020 SMR3BP02814 79 aaPredicted RBP9.09□□□□□ -0.95
SNRPA1-204ENST00000558020 UBE2G2P60604 165 aa9.09□□□□□ -0.95
SNRPA1-204ENST00000558020 GAGE1Q13065 139 aa9.09□□□□□ -0.95
SNRPA1-204ENST00000558020 GAGE4Q13068 117 aa9.09□□□□□ -0.95
SNRPA1-204ENST00000558020 GAGE5Q13069 117 aa9.09□□□□□ -0.95
SNRPA1-204ENST00000558020 GAGE13Q4V321 117 aa9.09□□□□□ -0.95
SNRPA1-204ENST00000558020 KRTAP3-3Q9BYR6 98 aa9.09□□□□□ -0.95
SNRPA1-204ENST00000558020 KRTAP3-2Q9BYR7 98 aa9.09□□□□□ -0.95
SNRPA1-204ENST00000558020 SRRM2Q9UQ35 2752 aaKnown RBP9.09□□□□□ -0.95
SNRPA1-204ENST00000558020 Q5BKY6 102 aa9.08□□□□□ -0.96
SNRPA1-204ENST00000558020 FAM162BQ5T6X4 162 aa9.08□□□□□ -0.96
SNRPA1-204ENST00000558020 Q6ZSN1 163 aa9.08□□□□□ -0.96
SNRPA1-204ENST00000558020 OR11H4Q8NGC9 324 aa9.08□□□□□ -0.96
SNRPA1-204ENST00000558020 STOML3Q8TAV4 291 aa9.08□□□□□ -0.96
SNRPA1-204ENST00000558020 RMI2Q96E14 147 aa9.08□□□□□ -0.96
SNRPA1-204ENST00000558020 PHLDA3Q9Y5J5 127 aa9.08□□□□□ -0.96
SNRPA1-204ENST00000558020 FAM74A7A6NL05 159 aa9.07□□□□□ -0.96
SNRPA1-204ENST00000558020 KRBOX1C9JBD0 128 aa9.07□□□□□ -0.96
SNRPA1-204ENST00000558020 ARMS2P0C7Q2 107 aa9.07□□□□□ -0.96
SNRPA1-204ENST00000558020 UBE2G1P62253 170 aa9.07□□□□□ -0.96
SNRPA1-204ENST00000558020 ZNF726P1Q15940 193 aa9.07□□□□□ -0.96
SNRPA1-204ENST00000558020 DNLZQ5SXM8 178 aa9.07□□□□□ -0.96
SNRPA1-204ENST00000558020 DMRTA1Q5VZB9 504 aa9.07□□□□□ -0.96
SNRPA1-204ENST00000558020 Q86TA4 180 aa9.07□□□□□ -0.96
SNRPA1-204ENST00000558020 FMC1Q96HJ9 113 aa9.07□□□□□ -0.96
SNRPA1-204ENST00000558020 TCEAL7Q9BRU2 100 aa9.07□□□□□ -0.96
SNRPA1-204ENST00000558020 RNF222A6NCQ9 220 aa9.06□□□□□ -0.96
SNRPA1-204ENST00000558020 H3BVH4 76 aa9.06□□□□□ -0.96
SNRPA1-204ENST00000558020 TPT1P13693 172 aaKnown RBP9.06□□□□□ -0.96
SNRPA1-204ENST00000558020 KCNIP4Q6PIL6 250 aa9.06□□□□□ -0.96
SNRPA1-204ENST00000558020 COX8CQ7Z4L0 72 aa9.06□□□□□ -0.96
SNRPA1-204ENST00000558020 DMBT1Q9UGM3 2413 aaPredicted RBP9.06□□□□□ -0.96
SNRPA1-204ENST00000558020 M0R036 132 aa9.05□□□□□ -0.96
SNRPA1-204ENST00000558020 FHITP49789 147 aa9.05□□□□□ -0.96
SNRPA1-204ENST00000558020 ELOBQ15370 118 aa9.05□□□□□ -0.96
SNRPA1-204ENST00000558020 FAM74A4Q5TZK3 123 aa9.05□□□□□ -0.96
SNRPA1-204ENST00000558020 CST9LP1Q5W188 147 aa9.05□□□□□ -0.96
SNRPA1-204ENST00000558020 UFSP1Q6NVU6 142 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms