RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 LINC01561Q8N1V8 128 aa8.05□□□□□ -1.12
SUPT16H-207ENST00000557394 NEXN-AS1Q8NBZ9 246 aa8.05□□□□□ -1.12
SUPT16H-207ENST00000557394 RASL10AQ92737 203 aa8.05□□□□□ -1.12
SUPT16H-207ENST00000557394 PLEKHB2Q96CS7 222 aa8.05□□□□□ -1.12
SUPT16H-207ENST00000557394 CTSZQ9UBR2 303 aa8.05□□□□□ -1.12
SUPT16H-207ENST00000557394 ARFGEF3Q5TH69 2177 aa8.05□□□□□ -1.12
SUPT16H-207ENST00000557394 MED13Q9UHV7 2174 aa8.05□□□□□ -1.12
SUPT16H-207ENST00000557394 SPTBN2O15020 2390 aa8.05□□□□□ -1.12
SUPT16H-207ENST00000557394 SPTBN4Q9H254 2564 aa8.05□□□□□ -1.12
SUPT16H-207ENST00000557394 ZNF815PA8K554 130 aa8.04□□□□□ -1.12
SUPT16H-207ENST00000557394 APELAP0DMC3 54 aa8.04□□□□□ -1.12
SUPT16H-207ENST00000557394 TRPT1Q86TN4 253 aaKnown RBP8.04□□□□□ -1.12
SUPT16H-207ENST00000557394 SVILO95425 2214 aa8.04□□□□□ -1.12
SUPT16H-207ENST00000557394 H3BVH4 76 aa8.04□□□□□ -1.12
SUPT16H-207ENST00000557394 SLC25A20O43772 301 aa8.04□□□□□ -1.12
SUPT16H-207ENST00000557394 SRSF9Q13242 221 aaKnown RBP eCLIP8.04□□□□□ -1.12
SUPT16H-207ENST00000557394 C10orf126Q8N4M7 172 aa8.04□□□□□ -1.12
SUPT16H-207ENST00000557394 SLC25A15Q9Y619 301 aa8.04□□□□□ -1.12
SUPT16H-207ENST00000557394 TRAV8-2A0A0B4J237 113 aa8.03□□□□□ -1.12
SUPT16H-207ENST00000557394 K7EIM0 57 aa8.03□□□□□ -1.12
SUPT16H-207ENST00000557394 CFC1BP0CG36 223 aa8.03□□□□□ -1.12
SUPT16H-207ENST00000557394 CFC1P0CG37 223 aa8.03□□□□□ -1.12
SUPT16H-207ENST00000557394 SLC25A16P16260 332 aa8.03□□□□□ -1.12
SUPT16H-207ENST00000557394 HES1Q14469 280 aa8.03□□□□□ -1.12
SUPT16H-207ENST00000557394 CNEP1R1Q8N9A8 125 aa8.03□□□□□ -1.12
SUPT16H-207ENST00000557394 TOMM6Q96B49 74 aa8.03□□□□□ -1.12
SUPT16H-207ENST00000557394 VKORC1Q9BQB6 163 aa8.03□□□□□ -1.12
SUPT16H-207ENST00000557394 NBEAQ8NFP9 2946 aa8.03□□□□□ -1.12
SUPT16H-207ENST00000557394 PLXNB1O43157 2135 aa8.03□□□□□ -1.12
SUPT16H-207ENST00000557394 HERVK_113P63121 156 aa8.03□□□□□ -1.12
SUPT16H-207ENST00000557394 Q8TAT8 98 aa8.03□□□□□ -1.12
SUPT16H-207ENST00000557394 C9orf85Q96MD7 179 aa8.03□□□□□ -1.12
SUPT16H-207ENST00000557394 ODF3Q96PU9 254 aa8.03□□□□□ -1.12
SUPT16H-207ENST00000557394 A0A0J9YY99 117 aa8.02□□□□□ -1.13
SUPT16H-207ENST00000557394 IGHV1-46P01743 117 aa8.02□□□□□ -1.13
SUPT16H-207ENST00000557394 TRGV3P03979 118 aa8.02□□□□□ -1.13
SUPT16H-207ENST00000557394 DEFB109BQ30KR1 87 aa8.02□□□□□ -1.13
SUPT16H-207ENST00000557394 CD164L2Q6UWJ8 174 aa8.02□□□□□ -1.13
SUPT16H-207ENST00000557394 SCGB1D4Q6XE38 83 aa8.02□□□□□ -1.13
SUPT16H-207ENST00000557394 OR10J6PQ8NGY7 276 aa8.02□□□□□ -1.13
SUPT16H-207ENST00000557394 Q9UF83 564 aa8.02□□□□□ -1.13
SUPT16H-207ENST00000557394 AKAP13Q12802 2813 aa8.02□□□□□ -1.13
SUPT16H-207ENST00000557394 IGHV3-30P01768 117 aa8.02□□□□□ -1.13
SUPT16H-207ENST00000557394 IGHV3-30-5P0DP03 117 aa8.02□□□□□ -1.13
SUPT16H-207ENST00000557394 ERCC8Q13216 396 aa8.02□□□□□ -1.13
SUPT16H-207ENST00000557394 CDSNQ15517 529 aa8.02□□□□□ -1.13
SUPT16H-207ENST00000557394 HLA-DMBP28068 263 aa8.01□□□□□ -1.13
SUPT16H-207ENST00000557394 Q6ZQT7 251 aa8.01□□□□□ -1.13
SUPT16H-207ENST00000557394 Q8N1Y9 231 aa8.01□□□□□ -1.13
SUPT16H-207ENST00000557394 MBD3L2Q8NHZ7 208 aaPredicted RBP8.01□□□□□ -1.13
SUPT16H-207ENST00000557394 SCGB3A1Q96QR1 104 aa8.01□□□□□ -1.13
SUPT16H-207ENST00000557394 SMIM2Q9BVW6 85 aa8.01□□□□□ -1.13
SUPT16H-207ENST00000557394 IGHV3-72A0A0B4J1Y9 119 aa8.01□□□□□ -1.13
SUPT16H-207ENST00000557394 ORMDL2Q53FV1 153 aa8.01□□□□□ -1.13
SUPT16H-207ENST00000557394 IGFL2Q6UWQ7 119 aa8.01□□□□□ -1.13
SUPT16H-207ENST00000557394 C9orf106Q8NAJ2 232 aa8.01□□□□□ -1.13
SUPT16H-207ENST00000557394 PRO1854Q9UHT4 67 aa8.01□□□□□ -1.13
SUPT16H-207ENST00000557394 CEP295Q9C0D2 2601 aa8□□□□□ -1.13
SUPT16H-207ENST00000557394 IGHV4-4A0A075B6R2 117 aa8□□□□□ -1.13
SUPT16H-207ENST00000557394 A0A0U1RQV1 116 aa8□□□□□ -1.13
SUPT16H-207ENST00000557394 CRIP2P52943 208 aaPredicted RBP8□□□□□ -1.13
SUPT16H-207ENST00000557394 HILS1P60008 231 aa8□□□□□ -1.13
SUPT16H-207ENST00000557394 C21orf62Q9NYP8 219 aa8□□□□□ -1.13
SUPT16H-207ENST00000557394 APC2O95996 2303 aa8□□□□□ -1.13
SUPT16H-207ENST00000557394 P0DMU3 169 aa8□□□□□ -1.13
SUPT16H-207ENST00000557394 FAM231AP0DMU4 169 aa8□□□□□ -1.13
SUPT16H-207ENST00000557394 FAM231CP0DMU5 169 aa8□□□□□ -1.13
SUPT16H-207ENST00000557394 FDCSPQ8NFU4 85 aa8□□□□□ -1.13
SUPT16H-207ENST00000557394 TRAV26-2A0A0B4J265 109 aa7.99□□□□□ -1.13
SUPT16H-207ENST00000557394 IGKV3D-20A0A0C4DH25 116 aa7.99□□□□□ -1.13
SUPT16H-207ENST00000557394 PMAIP1Q13794 54 aa7.99□□□□□ -1.13
SUPT16H-207ENST00000557394 SLC25A29Q8N8R3 303 aa7.99□□□□□ -1.13
SUPT16H-207ENST00000557394 C15orf53Q8NAA6 179 aa7.99□□□□□ -1.13
SUPT16H-207ENST00000557394 INTS1Q8N201 2190 aaKnown RBP7.99□□□□□ -1.13
SUPT16H-207ENST00000557394 IGHV7-4-1A0A0J9YVY3 117 aa7.98□□□□□ -1.13
SUPT16H-207ENST00000557394 KLHL30-AS1Q8NEE0 82 aa7.98□□□□□ -1.13
SUPT16H-207ENST00000557394 NTN5Q8WTR8 489 aaPredicted RBP7.98□□□□□ -1.13
SUPT16H-207ENST00000557394 ACACAQ13085 2346 aa7.98□□□□□ -1.13
SUPT16H-207ENST00000557394 CACNA1AO00555 2505 aa7.98□□□□□ -1.13
SUPT16H-207ENST00000557394 TRAV8-4A0A0B4J246 113 aa7.98□□□□□ -1.13
SUPT16H-207ENST00000557394 OOSP1A8MZH6 123 aa7.98□□□□□ -1.13
SUPT16H-207ENST00000557394 K7ENP7 123 aa7.98□□□□□ -1.13
SUPT16H-207ENST00000557394 FREM2Q5SZK8 3169 aa7.98□□□□□ -1.13
SUPT16H-207ENST00000557394 J3QQQ9 107 aa7.97□□□□□ -1.13
SUPT16H-207ENST00000557394 M0R1B8 84 aa7.97□□□□□ -1.13
SUPT16H-207ENST00000557394 IGHV3-33P01772 117 aa7.97□□□□□ -1.13
SUPT16H-207ENST00000557394 C11orf21Q9P2W6 132 aa7.97□□□□□ -1.13
SUPT16H-207ENST00000557394 SMAD5-AS1Q9Y6J3 95 aa7.97□□□□□ -1.13
SUPT16H-207ENST00000557394 C9orf153Q5TBE3 101 aa7.97□□□□□ -1.13
SUPT16H-207ENST00000557394 IGFL3Q6UXB1 125 aa7.97□□□□□ -1.13
SUPT16H-207ENST00000557394 GFRALQ6UXV0 394 aa7.97□□□□□ -1.13
SUPT16H-207ENST00000557394 Q6ZS46 218 aa7.97□□□□□ -1.13
SUPT16H-207ENST00000557394 SEM1Q6ZVN7 128 aa7.97□□□□□ -1.13
SUPT16H-207ENST00000557394 FAM57AQ8TBR7 257 aa7.97□□□□□ -1.13
SUPT16H-207ENST00000557394 SLC50A1Q9BRV3 221 aa7.97□□□□□ -1.13
SUPT16H-207ENST00000557394 RBAKDNA6NC62 111 aa7.96□□□□□ -1.13
SUPT16H-207ENST00000557394 LGALS9O00182 355 aa7.96□□□□□ -1.13
SUPT16H-207ENST00000557394 EIF4EBP3O60516 100 aaPredicted RBP7.96□□□□□ -1.13
SUPT16H-207ENST00000557394 PAPPA-AS1Q5QFB9 102 aa7.96□□□□□ -1.13
SUPT16H-207ENST00000557394 DYNAPQ8N1N2 210 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms