RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 LTAP01374 205 aa6.55□□□□□ -1.36
CHD8-213ENST00000557364 SLURP1P55000 103 aa6.55□□□□□ -1.36
CHD8-213ENST00000557364 C1orf147Q96MC9 270 aaPredicted RBP6.55□□□□□ -1.36
CHD8-213ENST00000557364 GAGE2AQ6NT46 116 aa6.55□□□□□ -1.36
CHD8-213ENST00000557364 NDUFB1O75438 58 aa6.54□□□□□ -1.36
CHD8-213ENST00000557364 HILS1P60008 231 aa6.54□□□□□ -1.36
CHD8-213ENST00000557364 ZNF503-AS2A6NEH8 195 aa6.54□□□□□ -1.36
CHD8-213ENST00000557364 NDUFA1O15239 70 aa6.54□□□□□ -1.36
CHD8-213ENST00000557364 LINC00205P59089 165 aa6.54□□□□□ -1.36
CHD8-213ENST00000557364 CCL25O15444 150 aa6.54□□□□□ -1.36
CHD8-213ENST00000557364 GRNP28799 593 aaKnown RBP6.54□□□□□ -1.36
CHD8-213ENST00000557364 Q9HAA7 133 aa6.54□□□□□ -1.36
CHD8-213ENST00000557364 PLXNB1O43157 2135 aa6.53□□□□□ -1.36
CHD8-213ENST00000557364 TMEM263Q8WUH6 116 aaKnown RBP6.53□□□□□ -1.36
CHD8-213ENST00000557364 HHLA3Q9XRX5 114 aa6.53□□□□□ -1.36
CHD8-213ENST00000557364 HCFC1P51610 2035 aa6.53□□□□□ -1.36
CHD8-213ENST00000557364 TRBV7-3A0A075B6L6 115 aa6.53□□□□□ -1.36
CHD8-213ENST00000557364 C3orf79P0CE67 100 aa6.53□□□□□ -1.36
CHD8-213ENST00000557364 SPRY4Q9C004 299 aa6.53□□□□□ -1.36
CHD8-213ENST00000557364 TPSG1Q9NRR2 321 aa6.53□□□□□ -1.36
CHD8-213ENST00000557364 XCL1P47992 114 aa6.53□□□□□ -1.36
CHD8-213ENST00000557364 RPL18AQ02543 176 aaKnown RBP6.53□□□□□ -1.36
CHD8-213ENST00000557364 ZFP2Q6ZN57 461 aa6.53□□□□□ -1.36
CHD8-213ENST00000557364 C11orf53Q8IXP5 236 aa6.53□□□□□ -1.36
CHD8-213ENST00000557364 MEGF9Q9H1U4 602 aa6.53□□□□□ -1.36
CHD8-213ENST00000557364 TMEM213A2RRL7 107 aa6.53□□□□□ -1.36
CHD8-213ENST00000557364 CRYGCP07315 174 aa6.53□□□□□ -1.36
CHD8-213ENST00000557364 SRSF3P84103 164 aaKnown RBP6.53□□□□□ -1.36
CHD8-213ENST00000557364 DUX4L9Q6RFH8 374 aaPredicted RBP6.53□□□□□ -1.36
CHD8-213ENST00000557364 PCDH15Q96QU1 1955 aa6.53□□□□□ -1.36
CHD8-213ENST00000557364 WT1P19544 449 aaPredicted RBP6.53□□□□□ -1.36
CHD8-213ENST00000557364 ZC2HC1AQ96GY0 325 aa6.53□□□□□ -1.36
CHD8-213ENST00000557364 SPATA25Q9BR10 227 aa6.53□□□□□ -1.36
CHD8-213ENST00000557364 SPRY2O43597 315 aa6.52□□□□□ -1.36
CHD8-213ENST00000557364 TRBV10-1A0A0K0K1A3 114 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 COLCA2A8K830 154 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 CXCL1P09341 107 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 Q8N9W7 124 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 A0A0J9YY99 117 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 J3QQQ9 107 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 NDUFS7O75251 213 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 HLA-DMBP28068 263 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 KIR3DS1Q14943 382 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 RSPO1Q2MKA7 263 aaPredicted RBP6.52□□□□□ -1.37
CHD8-213ENST00000557364 Q6ZSR3 168 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 DNAJC9-AS1A6NH13 148 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 PRR20EP86478 221 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 PRR20CP86479 221 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 PRR20DP86480 221 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 PRR20BP86481 221 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 PRR20AP86496 221 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 DEFB136Q30KP8 78 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 C18orf32Q8TCD1 76 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 H0YGX0 51 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 LINC00479Q96M42 142 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 PRO1854Q9UHT4 67 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 SIVA1O15304 175 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 RNF183Q96D59 192 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 LYRM9A8MSI8 78 aa6.52□□□□□ -1.37
CHD8-213ENST00000557364 ODF3Q96PU9 254 aa6.51□□□□□ -1.37
CHD8-213ENST00000557364 AGPAT4-IT1Q9H0P7 198 aa6.51□□□□□ -1.37
CHD8-213ENST00000557364 ZNF581Q9P0T4 197 aa6.51□□□□□ -1.37
CHD8-213ENST00000557364 IGHV3-38A0A0C4DH36 116 aa6.51□□□□□ -1.37
CHD8-213ENST00000557364 I3L2K1 104 aa6.51□□□□□ -1.37
CHD8-213ENST00000557364 C9orf47Q6ZRZ4 202 aa6.51□□□□□ -1.37
CHD8-213ENST00000557364 C11orf45Q8TAV5 145 aa6.51□□□□□ -1.37
CHD8-213ENST00000557364 C9JAW5 83 aa6.51□□□□□ -1.37
CHD8-213ENST00000557364 NXPH4O95158 308 aa6.51□□□□□ -1.37
CHD8-213ENST00000557364 UBE2AP49459 152 aa6.51□□□□□ -1.37
CHD8-213ENST00000557364 KIAA1549Q9HCM3 1950 aa6.51□□□□□ -1.37
CHD8-213ENST00000557364 IGHV4OR15-8A0A075B7B6 117 aa6.51□□□□□ -1.37
CHD8-213ENST00000557364 A0A087WW49 117 aa6.51□□□□□ -1.37
CHD8-213ENST00000557364 IGHG4P01861 327 aa6.51□□□□□ -1.37
CHD8-213ENST00000557364 DYNAPQ8N1N2 210 aa6.51□□□□□ -1.37
CHD8-213ENST00000557364 RNF144BQ7Z419 303 aa6.51□□□□□ -1.37
CHD8-213ENST00000557364 PRO0255Q9UI72 69 aa6.51□□□□□ -1.37
CHD8-213ENST00000557364 NFE4Q86UQ8 179 aa6.5□□□□□ -1.37
CHD8-213ENST00000557364 ORMDL1Q9P0S3 153 aa6.5□□□□□ -1.37
CHD8-213ENST00000557364 V9GYV3 84 aa6.5□□□□□ -1.37
CHD8-213ENST00000557364 BLCAPP62952 87 aa6.5□□□□□ -1.37
CHD8-213ENST00000557364 ZNF625Q96I27 306 aaPredicted RBP6.5□□□□□ -1.37
CHD8-213ENST00000557364 K7EIM0 57 aa6.5□□□□□ -1.37
CHD8-213ENST00000557364 SIRPDQ9H106 197 aa6.5□□□□□ -1.37
CHD8-213ENST00000557364 LGALS9O00182 355 aa6.5□□□□□ -1.37
CHD8-213ENST00000557364 TRAV4A0A0B4J268 109 aa6.5□□□□□ -1.37
CHD8-213ENST00000557364 hDV102S1A0JD36 115 aa6.5□□□□□ -1.37
CHD8-213ENST00000557364 A6NDX4 124 aa6.5□□□□□ -1.37
CHD8-213ENST00000557364 NAV2Q8IVL1 2488 aa6.5□□□□□ -1.37
CHD8-213ENST00000557364 LINC01548A6NM66 108 aa6.5□□□□□ -1.37
CHD8-213ENST00000557364 A0A087X0K7 114 aa6.49□□□□□ -1.37
CHD8-213ENST00000557364 CTSGP08311 255 aa6.49□□□□□ -1.37
CHD8-213ENST00000557364 hADV29S1A0JD25 119 aa6.49□□□□□ -1.37
CHD8-213ENST00000557364 OCIAD2Q56VL3 154 aa6.49□□□□□ -1.37
CHD8-213ENST00000557364 FANCD2OSQ96PS1 177 aa6.49□□□□□ -1.37
CHD8-213ENST00000557364 ABCA2Q9BZC7 2435 aa6.49□□□□□ -1.37
CHD8-213ENST00000557364 A0A096LPF7 62 aa6.49□□□□□ -1.37
CHD8-213ENST00000557364 ADAMTSL5Q6ZMM2 481 aa6.49□□□□□ -1.37
CHD8-213ENST00000557364 IGLV1-47P01700 117 aa6.49□□□□□ -1.37
CHD8-213ENST00000557364 DIAPH2-AS1Q14236 149 aa6.49□□□□□ -1.37
CHD8-213ENST00000557364 ATRAIDQ6UW56 229 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms