RNA–Protein interactions for RNA: ENST00000557294.5

PRKCH-223, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-223	ENST00000557294	PGP	A6NDG6	321 aa		11.72	□□□□□ -0.53
PRKCH-223	ENST00000557294	UBE2L3	P68036	154 aa	Known RBP	11.72	□□□□□ -0.53
PRKCH-223	ENST00000557294	SDIM1	Q6ZPB5	146 aa		11.72	□□□□□ -0.53
PRKCH-223	ENST00000557294	ARL6IP6	Q8N6S5	226 aa		11.72	□□□□□ -0.53
PRKCH-223	ENST00000557294	THAP6	Q8TBB0	222 aa		11.72	□□□□□ -0.53
PRKCH-223	ENST00000557294	C1orf43	Q9BWL3	253 aa		11.72	□□□□□ -0.53
PRKCH-223	ENST00000557294	PARL	Q9H300	379 aa		11.72	□□□□□ -0.53
PRKCH-223	ENST00000557294	OTOR	Q9NRC9	128 aa		11.72	□□□□□ -0.53
PRKCH-223	ENST00000557294	C11orf21	Q9P2W6	132 aa		11.72	□□□□□ -0.53
PRKCH-223	ENST00000557294		A8MWV9	139 aa		11.71	□□□□□ -0.53
PRKCH-223	ENST00000557294	USP17L23	D6RBM5	183 aa		11.71	□□□□□ -0.53
PRKCH-223	ENST00000557294	PRSS1	P07477	247 aa		11.71	□□□□□ -0.53
PRKCH-223	ENST00000557294	CMTM2	Q8TAZ6	248 aa		11.71	□□□□□ -0.53
PRKCH-223	ENST00000557294	ZC2HC1A	Q96GY0	325 aa		11.71	□□□□□ -0.53
PRKCH-223	ENST00000557294	TAAR5	O14804	337 aa		11.7	□□□□□ -0.54
PRKCH-223	ENST00000557294	KCNIP4	Q6PIL6	250 aa		11.7	□□□□□ -0.54
PRKCH-223	ENST00000557294	ENHO	Q6UWT2	76 aa		11.7	□□□□□ -0.54
PRKCH-223	ENST00000557294	GOLT1A	Q6ZVE7	132 aa		11.7	□□□□□ -0.54
PRKCH-223	ENST00000557294	RNASE3	P12724	160 aa	Known RBP	11.69	□□□□□ -0.54
PRKCH-223	ENST00000557294	S100A5	P33763	92 aa		11.69	□□□□□ -0.54
PRKCH-223	ENST00000557294	IL15RA	Q13261	267 aa		11.69	□□□□□ -0.54
PRKCH-223	ENST00000557294	ODF1	Q14990	250 aa		11.69	□□□□□ -0.54
PRKCH-223	ENST00000557294	CNPY1	Q3B7I2	92 aa		11.69	□□□□□ -0.54
PRKCH-223	ENST00000557294	FAM74A1	Q5RGS3	127 aa		11.69	□□□□□ -0.54
PRKCH-223	ENST00000557294	PIK3CD-AS1	Q5SR53	167 aa		11.69	□□□□□ -0.54
PRKCH-223	ENST00000557294	C14orf178	Q8N769	122 aa	Predicted RBP	11.69	□□□□□ -0.54
PRKCH-223	ENST00000557294	KCNIP2	Q9NS61	270 aa		11.69	□□□□□ -0.54
PRKCH-223	ENST00000557294	CCDC160	A6NGH7	325 aa		11.68	□□□□□ -0.54
PRKCH-223	ENST00000557294	BTC	P35070	178 aa		11.68	□□□□□ -0.54
PRKCH-223	ENST00000557294	ZNF80	P51504	273 aa	Predicted RBP	11.68	□□□□□ -0.54
PRKCH-223	ENST00000557294	S100A10	P60903	97 aa		11.68	□□□□□ -0.54
PRKCH-223	ENST00000557294	RPL19	P84098	196 aa	Known RBP	11.68	□□□□□ -0.54
PRKCH-223	ENST00000557294	NHLH2	Q02577	135 aa		11.68	□□□□□ -0.54
PRKCH-223	ENST00000557294	CIRBP	Q14011	172 aa	Known RBP	11.68	□□□□□ -0.54
PRKCH-223	ENST00000557294	DMRTA1	Q5VZB9	504 aa		11.68	□□□□□ -0.54
PRKCH-223	ENST00000557294	UFSP1	Q6NVU6	142 aa		11.68	□□□□□ -0.54
PRKCH-223	ENST00000557294	MBD2	Q9UBB5	411 aa		11.68	□□□□□ -0.54
PRKCH-223	ENST00000557294	RAB32	Q13637	225 aa		11.67	□□□□□ -0.54
PRKCH-223	ENST00000557294	OR5C1	Q8NGR4	320 aa		11.67	□□□□□ -0.54
PRKCH-223	ENST00000557294	CENPX	A8MT69	81 aa		11.66	□□□□□ -0.54
PRKCH-223	ENST00000557294	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.66	□□□□□ -0.54
PRKCH-223	ENST00000557294	KHDC3L	Q587J8	217 aa		11.66	□□□□□ -0.54
PRKCH-223	ENST00000557294	WDR61	Q9GZS3	305 aa	Known RBP	11.66	□□□□□ -0.54
PRKCH-223	ENST00000557294	TAS2R45	P59539	299 aa		11.65	□□□□□ -0.54
PRKCH-223	ENST00000557294	TRIQK	Q629K1	86 aa		11.65	□□□□□ -0.54
PRKCH-223	ENST00000557294	TMEM75	Q8N9X5	138 aa		11.65	□□□□□ -0.54
PRKCH-223	ENST00000557294	OR10G7	Q8NGN6	311 aa		11.65	□□□□□ -0.54
PRKCH-223	ENST00000557294	DPH3	Q96FX2	82 aa		11.65	□□□□□ -0.54
PRKCH-223	ENST00000557294	NDFIP1	Q9BT67	221 aa		11.65	□□□□□ -0.54
PRKCH-223	ENST00000557294	TMEM262	E9PQX1	116 aa		11.64	□□□□□ -0.55
PRKCH-223	ENST00000557294	C17orf112	F2Z3M2	114 aa		11.64	□□□□□ -0.55
PRKCH-223	ENST00000557294	GCG	P01275	180 aa		11.64	□□□□□ -0.55
PRKCH-223	ENST00000557294	CRP	P02741	224 aa		11.64	□□□□□ -0.55
PRKCH-223	ENST00000557294	OR2G3	Q8NGZ4	309 aa		11.64	□□□□□ -0.55
PRKCH-223	ENST00000557294	SGK494	Q96LW2	274 aa		11.64	□□□□□ -0.55
PRKCH-223	ENST00000557294	JPT2	Q9H910	190 aa		11.64	□□□□□ -0.55
PRKCH-223	ENST00000557294	HLA-DQA1	P01909	254 aa		11.63	□□□□□ -0.55
PRKCH-223	ENST00000557294	KRTAP10-8	P60410	259 aa		11.63	□□□□□ -0.55
PRKCH-223	ENST00000557294	RNF185	Q96GF1	192 aa		11.63	□□□□□ -0.55
PRKCH-223	ENST00000557294	OR5AC2	Q9NZP5	309 aa		11.63	□□□□□ -0.55
PRKCH-223	ENST00000557294		A0A0J9YXV3	536 aa		11.62	□□□□□ -0.55
PRKCH-223	ENST00000557294	GNG5	P63218	68 aa		11.62	□□□□□ -0.55
PRKCH-223	ENST00000557294	C15orf54	Q8N8G6	183 aa		11.62	□□□□□ -0.55
PRKCH-223	ENST00000557294	KRTAP9-2	Q9BYQ4	174 aa		11.62	□□□□□ -0.55
PRKCH-223	ENST00000557294	LPA	P08519	4548 aa		11.62	□□□□□ -0.55
PRKCH-223	ENST00000557294		A0A087WYN8	130 aa		11.61	□□□□□ -0.55
PRKCH-223	ENST00000557294	MIA	Q16674	131 aa		11.61	□□□□□ -0.55
PRKCH-223	ENST00000557294	CLRN3	Q8NCR9	226 aa		11.61	□□□□□ -0.55
PRKCH-223	ENST00000557294	SERTM2	A0A1B0GWG4	89 aa		11.6	□□□□□ -0.55
PRKCH-223	ENST00000557294	RHOD	O00212	210 aa		11.6	□□□□□ -0.55
PRKCH-223	ENST00000557294	S100A4	P26447	101 aa	Known RBP	11.6	□□□□□ -0.55
PRKCH-223	ENST00000557294	PHOX2A	O14813	284 aa		11.59	□□□□□ -0.55
PRKCH-223	ENST00000557294	EIF3G	O75821	320 aa	Known RBP eCLIP	11.59	□□□□□ -0.55
PRKCH-223	ENST00000557294	ANG	P03950	147 aa	Known RBP	11.59	□□□□□ -0.55
PRKCH-223	ENST00000557294	CNBP	P62633	177 aa	Known RBP	11.59	□□□□□ -0.55
PRKCH-223	ENST00000557294	SMUG1	Q53HV7	270 aa		11.59	□□□□□ -0.55
PRKCH-223	ENST00000557294	SEC22C	Q9BRL7	303 aa		11.59	□□□□□ -0.55
PRKCH-223	ENST00000557294	RBM38	Q9H0Z9	239 aa	Known RBP	11.59	□□□□□ -0.55
PRKCH-223	ENST00000557294	PSG8	Q9UQ74	426 aa		11.59	□□□□□ -0.55
PRKCH-223	ENST00000557294	IGKV3D-20	A0A0C4DH25	116 aa		11.58	□□□□□ -0.56
PRKCH-223	ENST00000557294	UBE2D3	P61077	147 aa		11.58	□□□□□ -0.56
PRKCH-223	ENST00000557294	UBE2D2	P62837	147 aa		11.58	□□□□□ -0.56
PRKCH-223	ENST00000557294	MPV17L2	Q567V2	206 aa		11.58	□□□□□ -0.56
PRKCH-223	ENST00000557294	WDR73	Q6P4I2	378 aa		11.58	□□□□□ -0.56
PRKCH-223	ENST00000557294	PQLC2	Q6ZP29	291 aa		11.58	□□□□□ -0.56
PRKCH-223	ENST00000557294	C7orf33	Q8WU49	177 aa		11.58	□□□□□ -0.56
PRKCH-223	ENST00000557294	TRBV6-8	A0A0A6YYG3	113 aa		11.57	□□□□□ -0.56
PRKCH-223	ENST00000557294	TRBV10-1	A0A0K0K1A3	114 aa		11.57	□□□□□ -0.56
PRKCH-223	ENST00000557294	ZFP69	Q49AA0	526 aa		11.57	□□□□□ -0.56
PRKCH-223	ENST00000557294	KRTAP26-1	Q6PEX3	210 aa		11.57	□□□□□ -0.56
PRKCH-223	ENST00000557294	SDHC	Q99643	169 aa	Predicted RBP	11.57	□□□□□ -0.56
PRKCH-223	ENST00000557294	PLAC8	Q9NZF1	115 aa		11.57	□□□□□ -0.56
PRKCH-223	ENST00000557294	IL36B	Q9NZH7	164 aa		11.57	□□□□□ -0.56
PRKCH-223	ENST00000557294	TRBV7-3	A0A075B6L6	115 aa		11.56	□□□□□ -0.56
PRKCH-223	ENST00000557294		K7EQM0	130 aa		11.56	□□□□□ -0.56
PRKCH-223	ENST00000557294	TCRA	P04437	139 aa		11.56	□□□□□ -0.56
PRKCH-223	ENST00000557294	RPL36A	P83881	106 aa	Known RBP	11.56	□□□□□ -0.56
PRKCH-223	ENST00000557294	FAM74A4	Q5TZK3	123 aa		11.56	□□□□□ -0.56
PRKCH-223	ENST00000557294	SPACA4	Q8TDM5	124 aa		11.56	□□□□□ -0.56
PRKCH-223	ENST00000557294	RPL36AL	Q969Q0	106 aa	Known RBP	11.56	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms