RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 RASL10AQ92737 203 aa9.07□□□□□ -0.96
SHMT2-227ENST00000557269 OSTCQ9NRP0 149 aa9.07□□□□□ -0.96
SHMT2-227ENST00000557269 MUC4Q99102 2169 aa9.07□□□□□ -0.96
SHMT2-227ENST00000557269 F8W036 122 aa9.06□□□□□ -0.96
SHMT2-227ENST00000557269 IGLC6P0CF74 106 aa9.06□□□□□ -0.96
SHMT2-227ENST00000557269 RPS20P60866 119 aaKnown RBP9.06□□□□□ -0.96
SHMT2-227ENST00000557269 ZNF876PQ49A33 203 aa9.06□□□□□ -0.96
SHMT2-227ENST00000557269 DMRTA1Q5VZB9 504 aa9.06□□□□□ -0.96
SHMT2-227ENST00000557269 ZFAND6Q6FIF0 208 aa9.06□□□□□ -0.96
SHMT2-227ENST00000557269 POM121L12Q8N7R1 296 aa9.06□□□□□ -0.96
SHMT2-227ENST00000557269 MUC7Q8TAX7 377 aa9.06□□□□□ -0.96
SHMT2-227ENST00000557269 GTSF1Q8WW33 167 aa9.06□□□□□ -0.96
SHMT2-227ENST00000557269 SFRP2Q96HF1 295 aa9.06□□□□□ -0.96
SHMT2-227ENST00000557269 SSBP4Q9BWG4 385 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-227ENST00000557269 V9GYV3 84 aa9.06□□□□□ -0.96
SHMT2-227ENST00000557269 SNAI2O43623 268 aa9.05□□□□□ -0.96
SHMT2-227ENST00000557269 HTN3P15516 51 aa9.05□□□□□ -0.96
SHMT2-227ENST00000557269 HOXA5P20719 270 aa9.05□□□□□ -0.96
SHMT2-227ENST00000557269 SSTP61278 116 aa9.05□□□□□ -0.96
SHMT2-227ENST00000557269 OR10G8Q8NGN5 311 aa9.05□□□□□ -0.96
SHMT2-227ENST00000557269 OR10AG1Q8NH19 301 aa9.05□□□□□ -0.96
SHMT2-227ENST00000557269 PHLDA1Q8WV24 401 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-227ENST00000557269 JPT2Q9H910 190 aa9.05□□□□□ -0.96
SHMT2-227ENST00000557269 TRGV2A0A075B6R0 118 aa9.04□□□□□ -0.96
SHMT2-227ENST00000557269 M0R381 172 aa9.04□□□□□ -0.96
SHMT2-227ENST00000557269 IGHV3-53P01767 116 aa9.04□□□□□ -0.96
SHMT2-227ENST00000557269 OR5AL1P0C617 328 aa9.04□□□□□ -0.96
SHMT2-227ENST00000557269 MED14OSP0DP75 135 aa9.04□□□□□ -0.96
SHMT2-227ENST00000557269 C10orf91Q5T1B1 145 aa9.04□□□□□ -0.96
SHMT2-227ENST00000557269 FER1L6-AS1Q8NA97 138 aa9.04□□□□□ -0.96
SHMT2-227ENST00000557269 PTH2Q96A98 100 aa9.04□□□□□ -0.96
SHMT2-227ENST00000557269 C18orf15Q96N68 181 aa9.04□□□□□ -0.96
SHMT2-227ENST00000557269 TPPP3Q9BW30 176 aa9.04□□□□□ -0.96
SHMT2-227ENST00000557269 SEC11CQ9BY50 192 aa9.04□□□□□ -0.96
SHMT2-227ENST00000557269 PHLDA3Q9Y5J5 127 aa9.04□□□□□ -0.96
SHMT2-227ENST00000557269 DNAH7Q8WXX0 4024 aa9.03□□□□□ -0.96
SHMT2-227ENST00000557269 DEFB131BA0A096LNP1 70 aa9.03□□□□□ -0.96
SHMT2-227ENST00000557269 XKRY2A2RUG3 117 aa9.03□□□□□ -0.96
SHMT2-227ENST00000557269 CT83Q5H943 113 aa9.03□□□□□ -0.96
SHMT2-227ENST00000557269 LYZL1Q6UWQ5 148 aa9.03□□□□□ -0.96
SHMT2-227ENST00000557269 C15orf54Q8N8G6 183 aa9.03□□□□□ -0.96
SHMT2-227ENST00000557269 ZNF479Q96JC4 524 aa9.03□□□□□ -0.96
SHMT2-227ENST00000557269 SAMD10Q9BYL1 202 aa9.03□□□□□ -0.96
SHMT2-227ENST00000557269 TRAV10A0A0B4J240 114 aa9.02□□□□□ -0.97
SHMT2-227ENST00000557269 A8MWL6 223 aa9.02□□□□□ -0.97
SHMT2-227ENST00000557269 F5H768 121 aa9.02□□□□□ -0.97
SHMT2-227ENST00000557269 RS1O15537 224 aa9.02□□□□□ -0.97
SHMT2-227ENST00000557269 NXPH4O95158 308 aa9.02□□□□□ -0.97
SHMT2-227ENST00000557269 ATP5G1P05496 136 aa9.02□□□□□ -0.97
SHMT2-227ENST00000557269 CTRLP40313 264 aa9.02□□□□□ -0.97
SHMT2-227ENST00000557269 PNRC1Q12796 327 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-227ENST00000557269 RNF212Q495C1 297 aa9.02□□□□□ -0.97
SHMT2-227ENST00000557269 CFAP126Q5VTH2 177 aa9.02□□□□□ -0.97
SHMT2-227ENST00000557269 CEMP1Q6PRD7 247 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-227ENST00000557269 TSKUQ8WUA8 353 aa9.02□□□□□ -0.97
SHMT2-227ENST00000557269 MSRB1Q9NZV6 116 aa9.02□□□□□ -0.97
SHMT2-227ENST00000557269 CARHSP1Q9Y2V2 147 aaKnown RBP9.02□□□□□ -0.97
SHMT2-227ENST00000557269 FHL2Q14192 279 aa9.01□□□□□ -0.97
SHMT2-227ENST00000557269 ZFP82Q8N141 532 aa9.01□□□□□ -0.97
SHMT2-227ENST00000557269 SYT8Q8NBV8 401 aa9.01□□□□□ -0.97
SHMT2-227ENST00000557269 OR4C5Q8NGB2 326 aa9.01□□□□□ -0.97
SHMT2-227ENST00000557269 PGLYRP4Q96LB8 373 aa9.01□□□□□ -0.97
SHMT2-227ENST00000557269 IGHV3-73A0A0B4J1V6 119 aa9□□□□□ -0.97
SHMT2-227ENST00000557269 TRAV4A0A0B4J268 109 aa9□□□□□ -0.97
SHMT2-227ENST00000557269 A0A1W2PPQ1 181 aa9□□□□□ -0.97
SHMT2-227ENST00000557269 F2Z2F3 143 aa9□□□□□ -0.97
SHMT2-227ENST00000557269 FOXA3P55318 350 aaPredicted RBP9□□□□□ -0.97
SHMT2-227ENST00000557269 PIK3CD-AS1Q5SR53 167 aa9□□□□□ -0.97
SHMT2-227ENST00000557269 CASC10Q5T4H9 136 aa9□□□□□ -0.97
SHMT2-227ENST00000557269 SPANXN1Q5VSR9 72 aa9□□□□□ -0.97
SHMT2-227ENST00000557269 UFSP1Q6NVU6 142 aa9□□□□□ -0.97
SHMT2-227ENST00000557269 IGHV4-4A0A075B6R2 117 aa8.99□□□□□ -0.97
SHMT2-227ENST00000557269 A0A087WWL8 130 aa8.99□□□□□ -0.97
SHMT2-227ENST00000557269 SMIM27A0A1W2PRY6 76 aa8.99□□□□□ -0.97
SHMT2-227ENST00000557269 HIGD1CA8MV81 97 aa8.99□□□□□ -0.97
SHMT2-227ENST00000557269 CRYGDP07320 174 aa8.99□□□□□ -0.97
SHMT2-227ENST00000557269 NTF3P20783 257 aa8.99□□□□□ -0.97
SHMT2-227ENST00000557269 Q6ZSN1 163 aa8.99□□□□□ -0.97
SHMT2-227ENST00000557269 NDUFAF3Q9BU61 184 aa8.99□□□□□ -0.97
SHMT2-227ENST00000557269 CNFNQ9BYD5 112 aa8.99□□□□□ -0.97
SHMT2-227ENST00000557269 GFRA4Q9GZZ7 299 aa8.99□□□□□ -0.97
SHMT2-227ENST00000557269 CSMD3Q7Z407 3707 aa8.98□□□□□ -0.97
SHMT2-227ENST00000557269 NACAE9PAV3 2078 aa8.98□□□□□ -0.97
SHMT2-227ENST00000557269 A0A0J9YY99 117 aa8.98□□□□□ -0.97
SHMT2-227ENST00000557269 NUPR2A6NF83 97 aa8.98□□□□□ -0.97
SHMT2-227ENST00000557269 A8MWV9 139 aa8.98□□□□□ -0.97
SHMT2-227ENST00000557269 IGLL5B9A064 214 aa8.98□□□□□ -0.97
SHMT2-227ENST00000557269 C3orf84H3BNL1 204 aa8.98□□□□□ -0.97
SHMT2-227ENST00000557269 MT-ND4LP03901 98 aa8.98□□□□□ -0.97
SHMT2-227ENST00000557269 CACNG7P62955 275 aa8.98□□□□□ -0.97
SHMT2-227ENST00000557269 TMEM88Q6PEY1 159 aa8.98□□□□□ -0.97
SHMT2-227ENST00000557269 NUP35Q8NFH5 326 aa8.98□□□□□ -0.97
SHMT2-227ENST00000557269 VSIG2Q96IQ7 327 aa8.98□□□□□ -0.97
SHMT2-227ENST00000557269 KIF25-AS1Q9Y6Z4 181 aa8.98□□□□□ -0.97
SHMT2-227ENST00000557269 TRAV26-1A0A087WT03 109 aa8.97□□□□□ -0.97
SHMT2-227ENST00000557269 FAM231BA6NCW3 169 aa8.97□□□□□ -0.97
SHMT2-227ENST00000557269 PPP1R2P9O14990 202 aa8.97□□□□□ -0.97
SHMT2-227ENST00000557269 APOC3P02656 99 aa8.97□□□□□ -0.97
SHMT2-227ENST00000557269 WDR73Q6P4I2 378 aa8.97□□□□□ -0.97
SHMT2-227ENST00000557269 C14orf178Q8N769 122 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 197.6 ms