RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 C14orf166Q9Y224 244 aaKnown RBP2.9□□□□□ -1.95
SCFD1-223ENST00000557076 URGCP-MRPS24S4R325 110 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 TRBV19A0A075B6N1 114 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 IGHV3-64A0A075B6Q5 118 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 FNDC10F2Z333 226 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 H7C1H1 209 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 M0R3E3 92 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 APOA1P02647 267 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 HIST1H1EP10412 219 aaKnown RBP2.89□□□□□ -1.95
SCFD1-223ENST00000557076 MGST1P10620 155 aaKnown RBP2.89□□□□□ -1.95
SCFD1-223ENST00000557076 IAPPP10997 89 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 SLC25A6P12236 298 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 INPP1P49441 399 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 ZNF266Q14584 549 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 TMEM183BQ1AE95 376 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 ZNF674Q2M3X9 581 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 SPANXN5Q5MJ07 72 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 TMEM78Q5T7P6 136 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 PRR9Q5T870 116 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 CFAP126Q5VTH2 177 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 PRR27Q6MZM9 219 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 ENHOQ6UWT2 76 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 TMEM183AQ8IXX5 376 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 ZNF664Q8N3J9 261 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 TMEM229BQ8NBD8 167 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 Q8TAT8 98 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 SPACA4Q8TDM5 124 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 GTSF1Q8WW33 167 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 LINC00479Q96M42 142 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 NPVFQ9HCQ7 196 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 WDR83OSQ9Y284 106 aa2.89□□□□□ -1.95
SCFD1-223ENST00000557076 STRAPQ9Y3F4 350 aaKnown RBP2.89□□□□□ -1.95
SCFD1-223ENST00000557076 A0A087WX48 190 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 LOC100506127A0A0U1RQW1 187 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 GOSR2O14653 212 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 GNRH2O43555 120 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 SYNGR2O43760 224 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 RAB3DO95716 219 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 LINC00694P0DN24 101 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 ZNF138P52744 262 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 TAS2R19P59542 299 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 SRPXP78539 464 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 PDE6HQ13956 83 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 PRR4Q16378 134 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 SCGB2B2Q4G0G5 96 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 MUC21Q5SSG8 566 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 Q6AWC8 147 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 FAM159AQ6UWV7 190 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 SNX29P2Q8IUI4 249 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 SUN5Q8TC36 379 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 PTH2Q96A98 100 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 SLC39A9Q9NUM3 307 aa2.88□□□□□ -1.95
SCFD1-223ENST00000557076 IGLV5-45A0A087WSX0 123 aa2.87□□□□□ -1.95
SCFD1-223ENST00000557076 TRAV26-2A0A0B4J265 109 aa2.87□□□□□ -1.95
SCFD1-223ENST00000557076 DUXBA0A1W2PPF3 345 aa2.87□□□□□ -1.95
SCFD1-223ENST00000557076 SMCO3A2RU48 225 aa2.87□□□□□ -1.95
SCFD1-223ENST00000557076 PGPA6NDG6 321 aa2.87□□□□□ -1.95
SCFD1-223ENST00000557076 COX7A2P2O60397 106 aa2.87□□□□□ -1.95
SCFD1-223ENST00000557076 FGF8P55075 233 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-223ENST00000557076 ZNF876PQ49A33 203 aa2.87□□□□□ -1.95
SCFD1-223ENST00000557076 C10orf113Q5VZT2 155 aa2.87□□□□□ -1.95
SCFD1-223ENST00000557076 KCNIP4Q6PIL6 250 aa2.87□□□□□ -1.95
SCFD1-223ENST00000557076 Q6ZRP5 223 aa2.87□□□□□ -1.95
SCFD1-223ENST00000557076 KRTAP7-1Q8IUC3 87 aa2.87□□□□□ -1.95
SCFD1-223ENST00000557076 C12orf45Q8N5I9 185 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-223ENST00000557076 RAB2BQ8WUD1 216 aa2.87□□□□□ -1.95
SCFD1-223ENST00000557076 SCGB3A2Q96PL1 93 aa2.87□□□□□ -1.95
SCFD1-223ENST00000557076 ATP5SQ99766 215 aa2.87□□□□□ -1.95
SCFD1-223ENST00000557076 TMEM14CQ9P0S9 112 aa2.87□□□□□ -1.95
SCFD1-223ENST00000557076 TIMM9Q9Y5J7 89 aa2.87□□□□□ -1.95
SCFD1-223ENST00000557076 LENEPQ9Y5L5 61 aa2.87□□□□□ -1.95
SCFD1-223ENST00000557076 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-223ENST00000557076 IGHV3-73A0A0B4J1V6 119 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 C5orf52A6NGY3 159 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 DISC1C4P0D8 188 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 AGPAT2O15120 278 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 CTDSPLO15194 276 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 NOL3O60936 208 aaKnown RBP2.86□□□□□ -1.95
SCFD1-223ENST00000557076 CHTF8P0CG12 524 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 ANXA3P12429 323 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 SSBP1Q04837 148 aaKnown RBP2.86□□□□□ -1.95
SCFD1-223ENST00000557076 GAGE5Q13069 117 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 MIAQ16674 131 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 KRTAP26-1Q6PEX3 210 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 ZFP2Q6ZN57 461 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 Q6ZRG5 221 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 NRARPQ7Z6K4 114 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 EXOC3-AS1Q8N2X6 119 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 TMEM75Q8N9X5 138 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 C15orf40Q8WUR7 153 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 SGK494Q96LW2 274 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 PRRT1Q99946 306 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 GGACTQ9BVM4 153 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 COMMD3Q9UBI1 195 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 EXTL2Q9UBQ6 330 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 Q9UF83 564 aa2.86□□□□□ -1.95
SCFD1-223ENST00000557076 IGKV2-40A0A087WW87 121 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-223ENST00000557076 RBAKDNA6NC62 111 aa2.85□□□□□ -1.95
SCFD1-223ENST00000557076 TMEM262E9PQX1 116 aa2.85□□□□□ -1.95
SCFD1-223ENST00000557076 IFNA7P01567 189 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms