RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 COX11Q9Y6N1 276 aa11.66□□□□□ -0.54
TMEM55B-207ENST00000557041 SRSF1Q07955 248 aaKnown RBP eCLIP11.66□□□□□ -0.54
TMEM55B-207ENST00000557041 A6NDX4 124 aa11.65□□□□□ -0.54
TMEM55B-207ENST00000557041 KNCNA6PVL3 124 aa11.65□□□□□ -0.54
TMEM55B-207ENST00000557041 IGKCP01834 107 aa11.65□□□□□ -0.54
TMEM55B-207ENST00000557041 LINC01559Q495D7 138 aa11.65□□□□□ -0.54
TMEM55B-207ENST00000557041 Q5PR19 223 aa11.65□□□□□ -0.54
TMEM55B-207ENST00000557041 Q96MF0 132 aa11.65□□□□□ -0.54
TMEM55B-207ENST00000557041 SMPXQ9UHP9 88 aa11.65□□□□□ -0.54
TMEM55B-207ENST00000557041 ZNF493Q6ZR52 646 aa11.65□□□□□ -0.54
TMEM55B-207ENST00000557041 TMEM190Q8WZ59 177 aa11.65□□□□□ -0.54
TMEM55B-207ENST00000557041 VPS25Q9BRG1 176 aa11.65□□□□□ -0.54
TMEM55B-207ENST00000557041 CSTL1Q9H114 145 aa11.65□□□□□ -0.54
TMEM55B-207ENST00000557041 MS4A6AQ9H2W1 248 aa11.65□□□□□ -0.54
TMEM55B-207ENST00000557041 BVES-AS1Q5T3Y7 98 aa11.65□□□□□ -0.55
TMEM55B-207ENST00000557041 GAGE10A6NGK3 116 aa11.64□□□□□ -0.55
TMEM55B-207ENST00000557041 RNF185Q96GF1 192 aa11.64□□□□□ -0.55
TMEM55B-207ENST00000557041 MXRA5Q9NR99 2828 aa11.64□□□□□ -0.55
TMEM55B-207ENST00000557041 K7EP13 123 aa11.63□□□□□ -0.55
TMEM55B-207ENST00000557041 DPM2O94777 84 aa11.63□□□□□ -0.55
TMEM55B-207ENST00000557041 COX8AP10176 69 aa11.63□□□□□ -0.55
TMEM55B-207ENST00000557041 CD300EQ496F6 205 aaPredicted RBP11.63□□□□□ -0.55
TMEM55B-207ENST00000557041 SCRT2Q9NQ03 307 aa11.63□□□□□ -0.55
TMEM55B-207ENST00000557041 A6NDN8 102 aa11.63□□□□□ -0.55
TMEM55B-207ENST00000557041 CCL25O15444 150 aa11.63□□□□□ -0.55
TMEM55B-207ENST00000557041 ATP5LO75964 103 aa11.63□□□□□ -0.55
TMEM55B-207ENST00000557041 HIST1H4GQ99525 98 aa11.63□□□□□ -0.55
TMEM55B-207ENST00000557041 DPH3P1Q9H4G8 78 aa11.63□□□□□ -0.55
TMEM55B-207ENST00000557041 NHP2Q9NX24 153 aaKnown RBP11.63□□□□□ -0.55
TMEM55B-207ENST00000557041 IGHV3-64A0A075B6Q5 118 aa11.62□□□□□ -0.55
TMEM55B-207ENST00000557041 A0A096LNJ9 63 aa11.62□□□□□ -0.55
TMEM55B-207ENST00000557041 PRM2P04554 102 aa11.62□□□□□ -0.55
TMEM55B-207ENST00000557041 SUMO2P61956 95 aaKnown RBP11.62□□□□□ -0.55
TMEM55B-207ENST00000557041 C9orf47Q6ZRZ4 202 aa11.62□□□□□ -0.55
TMEM55B-207ENST00000557041 BBC3Q96PG8 261 aaPredicted RBP11.62□□□□□ -0.55
TMEM55B-207ENST00000557041 MEGF9Q9H1U4 602 aa11.62□□□□□ -0.55
TMEM55B-207ENST00000557041 ZFHX3Q15911 3703 aa11.62□□□□□ -0.55
TMEM55B-207ENST00000557041 DEFB131AP59861 70 aa11.62□□□□□ -0.55
TMEM55B-207ENST00000557041 SLURP1P55000 103 aa11.62□□□□□ -0.55
TMEM55B-207ENST00000557041 SRSF9Q13242 221 aaKnown RBP eCLIP11.62□□□□□ -0.55
TMEM55B-207ENST00000557041 TMEM170BQ5T4T1 132 aa11.62□□□□□ -0.55
TMEM55B-207ENST00000557041 Q8N8P6 123 aa11.61□□□□□ -0.55
TMEM55B-207ENST00000557041 RBAKDNA6NC62 111 aa11.61□□□□□ -0.55
TMEM55B-207ENST00000557041 SLC25A16P16260 332 aa11.61□□□□□ -0.55
TMEM55B-207ENST00000557041 TCTEX1D4Q5JR98 221 aa11.61□□□□□ -0.55
TMEM55B-207ENST00000557041 LGALS9BQ3B8N2 356 aa11.61□□□□□ -0.55
TMEM55B-207ENST00000557041 LGALS9CQ6DKI2 356 aa11.61□□□□□ -0.55
TMEM55B-207ENST00000557041 KIR2DL4Q99706 377 aa11.61□□□□□ -0.55
TMEM55B-207ENST00000557041 IGHV4OR15-8A0A075B7B6 117 aa11.6□□□□□ -0.55
TMEM55B-207ENST00000557041 A0A087WW49 117 aa11.6□□□□□ -0.55
TMEM55B-207ENST00000557041 CD5LO43866 347 aa11.6□□□□□ -0.55
TMEM55B-207ENST00000557041 HOXD3P31249 432 aaPredicted RBP11.6□□□□□ -0.55
TMEM55B-207ENST00000557041 ORAOV1Q8WV07 137 aa11.6□□□□□ -0.55
TMEM55B-207ENST00000557041 ZFAND2AQ8N6M9 145 aa11.6□□□□□ -0.55
TMEM55B-207ENST00000557041 OR11H12B2RN74 326 aa11.59□□□□□ -0.55
TMEM55B-207ENST00000557041 RPL24P83731 157 aaKnown RBP11.59□□□□□ -0.55
TMEM55B-207ENST00000557041 OR11H1Q8NG94 326 aa11.59□□□□□ -0.55
TMEM55B-207ENST00000557041 OR11H2Q8NH07 326 aa11.59□□□□□ -0.55
TMEM55B-207ENST00000557041 SPOCK3Q9BQ16 436 aa11.59□□□□□ -0.55
TMEM55B-207ENST00000557041 UBE2V1Q13404 147 aa11.59□□□□□ -0.55
TMEM55B-207ENST00000557041 ZNF876PQ49A33 203 aa11.59□□□□□ -0.55
TMEM55B-207ENST00000557041 C18orf65Q6ZTR6 163 aa11.59□□□□□ -0.55
TMEM55B-207ENST00000557041 SMIM2Q9BVW6 85 aa11.59□□□□□ -0.55
TMEM55B-207ENST00000557041 K7ERJ3 54 aa11.59□□□□□ -0.55
TMEM55B-207ENST00000557041 CRXO43186 299 aaPredicted RBP11.59□□□□□ -0.55
TMEM55B-207ENST00000557041 C2orf66Q6UXQ4 117 aa11.59□□□□□ -0.55
TMEM55B-207ENST00000557041 KLHL30-AS1Q8NEE0 82 aa11.59□□□□□ -0.55
TMEM55B-207ENST00000557041 MDFICQ9P1T7 246 aa11.58□□□□□ -0.56
TMEM55B-207ENST00000557041 CHTOPQ9Y3Y2 248 aaKnown RBP11.58□□□□□ -0.56
TMEM55B-207ENST00000557041 IGKV2D-26A0A0A0MRZ7 120 aa11.58□□□□□ -0.56
TMEM55B-207ENST00000557041 ITPR2Q14571 2701 aa11.57□□□□□ -0.56
TMEM55B-207ENST00000557041 DSCR9P59020 149 aa11.57□□□□□ -0.56
TMEM55B-207ENST00000557041 UBE2E2Q96LR5 201 aa11.57□□□□□ -0.56
TMEM55B-207ENST00000557041 CYSLTR1Q9Y271 337 aa11.57□□□□□ -0.56
TMEM55B-207ENST00000557041 ARL6IP6Q8N6S5 226 aa11.57□□□□□ -0.56
TMEM55B-207ENST00000557041 FOSL1P15407 271 aa11.56□□□□□ -0.56
TMEM55B-207ENST00000557041 GPHB5Q86YW7 130 aa11.56□□□□□ -0.56
TMEM55B-207ENST00000557041 APRG1Q8IVJ8 170 aa11.56□□□□□ -0.56
TMEM55B-207ENST00000557041 VPREB3Q9UKI3 123 aa11.56□□□□□ -0.56
TMEM55B-207ENST00000557041 RPL39P62891 51 aaKnown RBP11.56□□□□□ -0.56
TMEM55B-207ENST00000557041 MTURNQ8N3F0 131 aa11.56□□□□□ -0.56
TMEM55B-207ENST00000557041 GATD1Q8NB37 220 aa11.56□□□□□ -0.56
TMEM55B-207ENST00000557041 LINC01587Q99440 93 aa11.56□□□□□ -0.56
TMEM55B-207ENST00000557041 SYT8Q8NBV8 401 aa11.55□□□□□ -0.56
TMEM55B-207ENST00000557041 TP53TG1Q9Y2A0 90 aa11.55□□□□□ -0.56
TMEM55B-207ENST00000557041 IGHV3-16A0A0C4DH30 117 aa11.55□□□□□ -0.56
TMEM55B-207ENST00000557041 H7C2G1 150 aa11.55□□□□□ -0.56
TMEM55B-207ENST00000557041 ODF1Q14990 250 aa11.55□□□□□ -0.56
TMEM55B-207ENST00000557041 ORMDL2Q53FV1 153 aa11.55□□□□□ -0.56
TMEM55B-207ENST00000557041 TAX1BP3O14907 124 aa11.55□□□□□ -0.56
TMEM55B-207ENST00000557041 MRPL52Q86TS9 123 aaKnown RBP11.55□□□□□ -0.56
TMEM55B-207ENST00000557041 SDHAF1A6NFY7 115 aa11.54□□□□□ -0.56
TMEM55B-207ENST00000557041 GATA3P23771 443 aa11.54□□□□□ -0.56
TMEM55B-207ENST00000557041 MRPL53Q96EL3 112 aaKnown RBP11.54□□□□□ -0.56
TMEM55B-207ENST00000557041 U3KQE9 123 aa11.54□□□□□ -0.56
TMEM55B-207ENST00000557041 Q8N1Y9 231 aa11.54□□□□□ -0.56
TMEM55B-207ENST00000557041 CHAC1Q9BUX1 264 aa11.54□□□□□ -0.56
TMEM55B-207ENST00000557041 XCL2Q9UBD3 114 aa11.54□□□□□ -0.56
TMEM55B-207ENST00000557041 DUSP14O95147 198 aaKnown RBP11.54□□□□□ -0.56
TMEM55B-207ENST00000557041 RNASE13Q5GAN3 156 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms