RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 ARL3P36405 182 aa8.62□□□□□ -1.03
SRP54-213ENST00000556994 ASIPP42127 132 aa8.62□□□□□ -1.03
SRP54-213ENST00000556994 KLK9Q2XQG4 91 aa8.62□□□□□ -1.03
SRP54-213ENST00000556994 PGPEP1Q9NXJ5 209 aa8.62□□□□□ -1.03
SRP54-213ENST00000556994 KLK9Q9UKQ9 250 aa8.62□□□□□ -1.03
SRP54-213ENST00000556994 TRAV41A0A0B4J266 112 aa8.62□□□□□ -1.03
SRP54-213ENST00000556994 TRAV21A0A0B4J279 112 aa8.62□□□□□ -1.03
SRP54-213ENST00000556994 ZNF815PA8K554 130 aa8.62□□□□□ -1.03
SRP54-213ENST00000556994 IGHV3-11P01762 117 aa8.62□□□□□ -1.03
SRP54-213ENST00000556994 SLC25A16P16260 332 aa8.62□□□□□ -1.03
SRP54-213ENST00000556994 SCGB1D4Q6XE38 83 aa8.62□□□□□ -1.03
SRP54-213ENST00000556994 C9orf139Q6ZV77 190 aa8.62□□□□□ -1.03
SRP54-213ENST00000556994 OR10J6PQ8NGY7 276 aa8.62□□□□□ -1.03
SRP54-213ENST00000556994 WFDC12Q8WWY7 111 aa8.62□□□□□ -1.03
SRP54-213ENST00000556994 BPESC1Q9GZL8 116 aa8.62□□□□□ -1.03
SRP54-213ENST00000556994 UBTD1Q9HAC8 227 aa8.62□□□□□ -1.03
SRP54-213ENST00000556994 PRO0461Q9UI25 63 aa8.62□□□□□ -1.03
SRP54-213ENST00000556994 MUC4Q99102 2169 aa8.61□□□□□ -1.03
SRP54-213ENST00000556994 NPFFO15130 113 aa8.61□□□□□ -1.03
SRP54-213ENST00000556994 DUSP14O95147 198 aaKnown RBP8.61□□□□□ -1.03
SRP54-213ENST00000556994 LINC00477Q96M19 166 aa8.61□□□□□ -1.03
SRP54-213ENST00000556994 SPOCK3Q9BQ16 436 aa8.61□□□□□ -1.03
SRP54-213ENST00000556994 C20orf78Q9BR46 151 aa8.61□□□□□ -1.03
SRP54-213ENST00000556994 A0A1B0GWB2 263 aa8.6□□□□□ -1.03
SRP54-213ENST00000556994 LINC01549A6NIU2 74 aa8.6□□□□□ -1.03
SRP54-213ENST00000556994 SRD5A1P18405 259 aa8.6□□□□□ -1.03
SRP54-213ENST00000556994 SRSF9Q13242 221 aaKnown RBP eCLIP8.6□□□□□ -1.03
SRP54-213ENST00000556994 JPT2Q9H910 190 aa8.6□□□□□ -1.03
SRP54-213ENST00000556994 MRPL16Q9NX20 251 aaKnown RBP8.6□□□□□ -1.03
SRP54-213ENST00000556994 J3QR89 54 aa8.6□□□□□ -1.03
SRP54-213ENST00000556994 CRYGDP07320 174 aa8.6□□□□□ -1.03
SRP54-213ENST00000556994 RNASE3P12724 160 aaKnown RBP8.6□□□□□ -1.03
SRP54-213ENST00000556994 LMO4P61968 165 aa8.6□□□□□ -1.03
SRP54-213ENST00000556994 BRD3OSQ6XYD6 125 aa8.6□□□□□ -1.03
SRP54-213ENST00000556994 LENEPQ9Y5L5 61 aa8.59□□□□□ -1.03
SRP54-213ENST00000556994 LOC107984156A0A0G2JMH3 177 aa8.59□□□□□ -1.03
SRP54-213ENST00000556994 APOMO95445 188 aa8.59□□□□□ -1.03
SRP54-213ENST00000556994 CRYBG3Q68DQ2 2970 aa8.59□□□□□ -1.03
SRP54-213ENST00000556994 ZFP2Q6ZN57 461 aa8.59□□□□□ -1.03
SRP54-213ENST00000556994 ARL17AQ8IVW1 177 aa8.59□□□□□ -1.03
SRP54-213ENST00000556994 HIVEP3Q5T1R4 2406 aa8.59□□□□□ -1.03
SRP54-213ENST00000556994 C11orf86A6NJI1 115 aa8.58□□□□□ -1.04
SRP54-213ENST00000556994 SOCS3O14543 225 aa8.58□□□□□ -1.04
SRP54-213ENST00000556994 TSHBP01222 138 aa8.58□□□□□ -1.04
SRP54-213ENST00000556994 RPL39P62891 51 aaKnown RBP8.58□□□□□ -1.04
SRP54-213ENST00000556994 OVOL1O14753 267 aa8.58□□□□□ -1.04
SRP54-213ENST00000556994 EDN2P20800 178 aa8.58□□□□□ -1.04
SRP54-213ENST00000556994 PSMB2P49721 201 aa8.58□□□□□ -1.04
SRP54-213ENST00000556994 SMCPP49901 116 aaPredicted RBP8.58□□□□□ -1.04
SRP54-213ENST00000556994 LY6EQ16553 131 aa8.58□□□□□ -1.04
SRP54-213ENST00000556994 TP53TG1Q9Y2A0 90 aa8.58□□□□□ -1.04
SRP54-213ENST00000556994 A0A087WWL8 130 aa8.57□□□□□ -1.04
SRP54-213ENST00000556994 LINC01619G3V211 115 aa8.57□□□□□ -1.04
SRP54-213ENST00000556994 NDUFS8O00217 210 aa8.57□□□□□ -1.04
SRP54-213ENST00000556994 COX6B1P14854 86 aa8.57□□□□□ -1.04
SRP54-213ENST00000556994 SPATA25Q9BR10 227 aa8.57□□□□□ -1.04
SRP54-213ENST00000556994 MOB4Q9Y3A3 225 aa8.57□□□□□ -1.04
SRP54-213ENST00000556994 FAM223BA6NKX1 122 aa8.57□□□□□ -1.04
SRP54-213ENST00000556994 TSPAN13O95857 204 aa8.57□□□□□ -1.04
SRP54-213ENST00000556994 FAM223AQ8IWN6 122 aa8.57□□□□□ -1.04
SRP54-213ENST00000556994 ZNF418Q8TF45 676 aaPredicted RBP8.57□□□□□ -1.04
SRP54-213ENST00000556994 PTH2Q96A98 100 aa8.57□□□□□ -1.04
SRP54-213ENST00000556994 ABCA2Q9BZC7 2435 aa8.56□□□□□ -1.04
SRP54-213ENST00000556994 IGLV4-69A0A075B6H9 119 aa8.56□□□□□ -1.04
SRP54-213ENST00000556994 C19orf54Q5BKX5 351 aa8.56□□□□□ -1.04
SRP54-213ENST00000556994 Q6ZS46 218 aa8.56□□□□□ -1.04
SRP54-213ENST00000556994 F5H697 171 aa8.55□□□□□ -1.04
SRP54-213ENST00000556994 NDUFA4O00483 81 aa8.55□□□□□ -1.04
SRP54-213ENST00000556994 TGFAP01135 160 aa8.55□□□□□ -1.04
SRP54-213ENST00000556994 LINC00315P59091 139 aa8.55□□□□□ -1.04
SRP54-213ENST00000556994 FAM19A4Q96LR4 140 aa8.55□□□□□ -1.04
SRP54-213ENST00000556994 CIDEAO60543 219 aa8.55□□□□□ -1.04
SRP54-213ENST00000556994 PF4V1P10720 104 aa8.55□□□□□ -1.04
SRP54-213ENST00000556994 KLRB1Q12918 225 aa8.55□□□□□ -1.04
SRP54-213ENST00000556994 CFAP126Q5VTH2 177 aa8.55□□□□□ -1.04
SRP54-213ENST00000556994 NFE4Q86UQ8 179 aa8.55□□□□□ -1.04
SRP54-213ENST00000556994 DLX4Q92988 240 aaPredicted RBP8.55□□□□□ -1.04
SRP54-213ENST00000556994 RHPN1-AS1Q9BWJ2 59 aa8.55□□□□□ -1.04
SRP54-213ENST00000556994 TMEM238LA0A1B0GVL6 79 aa8.54□□□□□ -1.04
SRP54-213ENST00000556994 A6NJY4 79 aa8.54□□□□□ -1.04
SRP54-213ENST00000556994 UBE2D1P51668 147 aa8.54□□□□□ -1.04
SRP54-213ENST00000556994 TSPEAR-AS2P59090 65 aa8.54□□□□□ -1.04
SRP54-213ENST00000556994 FOXI1Q12951 378 aa8.54□□□□□ -1.04
SRP54-213ENST00000556994 TMEM170BQ5T4T1 132 aa8.54□□□□□ -1.04
SRP54-213ENST00000556994 SUMO4Q6EEV6 95 aa8.54□□□□□ -1.04
SRP54-213ENST00000556994 CLEC2AQ6UVW9 174 aa8.54□□□□□ -1.04
SRP54-213ENST00000556994 KIF25-AS1Q9Y6Z4 181 aa8.54□□□□□ -1.04
SRP54-213ENST00000556994 A0A0J9YY99 117 aa8.54□□□□□ -1.04
SRP54-213ENST00000556994 IGIPA6NJ69 53 aa8.54□□□□□ -1.04
SRP54-213ENST00000556994 CD7P09564 240 aa8.54□□□□□ -1.04
SRP54-213ENST00000556994 SCGB1A1P11684 91 aa8.54□□□□□ -1.04
SRP54-213ENST00000556994 FAM74A4Q5TZK3 123 aa8.54□□□□□ -1.04
SRP54-213ENST00000556994 CELSR2Q9HCU4 2923 aa8.54□□□□□ -1.04
SRP54-213ENST00000556994 PIEZO1Q92508 2521 aa8.53□□□□□ -1.04
SRP54-213ENST00000556994 TRAV12-3A0A0B4J271 114 aa8.53□□□□□ -1.04
SRP54-213ENST00000556994 BLCAPP62952 87 aa8.53□□□□□ -1.04
SRP54-213ENST00000556994 SYT8Q8NBV8 401 aa8.53□□□□□ -1.04
SRP54-213ENST00000556994 OPRPNQ99935 248 aaPredicted RBP8.53□□□□□ -1.04
SRP54-213ENST00000556994 POLR2KP53803 58 aaKnown RBP8.53□□□□□ -1.04
SRP54-213ENST00000556994 PMVKQ15126 192 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms