RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 Q6ZSV7 163 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 SMIM15Q7Z3B0 74 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 TMEM256Q8N2U0 113 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 FER1L6-AS1Q8NA97 138 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 GATD1Q8NB37 220 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 OR8A1Q8NGG7 326 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 Q8TAT8 98 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 DUX5Q96PT3 197 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 TPPP3Q9BW30 176 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 SAMD10Q9BYL1 202 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 MS4A6AQ9H2W1 248 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 NIT2Q9NQR4 276 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 RYR3Q15413 4870 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 DSCAML1Q8TD84 2053 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 KMT2CQ8NEZ4 4911 aaKnown RBP3.32□□□□□ -1.88
SRP54-212ENST00000556992 NBEAL2Q6ZNJ1 2754 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 IGHV4OR15-8A0A075B7B6 117 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 A0A087WW49 117 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 TMSB15BA0A087X1C1 80 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 TRAV21A0A0B4J279 112 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 GRIFINA4D1Z8 144 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 C2orf70A6NJV1 201 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 SERF1AO75920 110 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 DUSP14O95147 198 aaKnown RBP3.32□□□□□ -1.88
SRP54-212ENST00000556992 PPBPP02775 128 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 OR5AL1P0C617 328 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 ARMS2P0C7Q2 107 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 IGLC6P0CF74 106 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 SRD5A1P18405 259 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 RAB4AP20338 218 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 PMCHP20382 165 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 NTF3P20783 257 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 TSPOP30536 169 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 RNASE4P34096 147 aaKnown RBP3.32□□□□□ -1.88
SRP54-212ENST00000556992 CTRLP40313 264 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 LEPP41159 167 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 CMC4P56277 68 aaPredicted RBP3.32□□□□□ -1.88
SRP54-212ENST00000556992 CACNG7P62955 275 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 JOSD1Q15040 202 aaPredicted RBP3.32□□□□□ -1.88
SRP54-212ENST00000556992 KRTAP24-1Q3LI83 254 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 KIAA1644Q3SXP7 199 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 TCTEX1D4Q5JR98 221 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 EBLN2Q6P2I7 272 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 NIT1Q86X76 327 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 OR11H1Q8NG94 326 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 DCANP1Q8TF63 244 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 CHCHD1Q96BP2 118 aaKnown RBP3.32□□□□□ -1.88
SRP54-212ENST00000556992 FAM19A4Q96LR4 140 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 ODF3Q96PU9 254 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 CNFNQ9BYD5 112 aa3.32□□□□□ -1.88
SRP54-212ENST00000556992 CSPG4Q6UVK1 2322 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 IGKV3-7A0A075B6H7 116 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 IGHV4-4A0A075B6R2 117 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 TRAV25A0A0B4J276 109 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 IGKV3D-20A0A0C4DH25 116 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 K7EQG2 157 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 NUPR1O60356 82 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 HSBP1O75506 76 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 NDUFA7O95182 113 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 LY6G6DO95868 133 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 SCGB1D1O95968 90 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 LINC00614P0C842 121 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 ZNF705DP0CH99 300 aaPredicted RBP3.31□□□□□ -1.88
SRP54-212ENST00000556992 ZNF705BP0CI00 300 aaPredicted RBP3.31□□□□□ -1.88
SRP54-212ENST00000556992 PRB4P10163 310 aaPredicted RBP3.31□□□□□ -1.88
SRP54-212ENST00000556992 IQCJQ1A5X6 159 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 PYY3Q5JQD4 70 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 PSMG4Q5JS54 123 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 FAM104BQ5XKR9 115 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 APRG1Q8IVJ8 170 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 ZFAND2AQ8N6M9 145 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 PRR26Q8N8Z3 221 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 OR9G4Q8NGQ1 327 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 LINC01006Q8NI28 216 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 C18orf32Q8TCD1 76 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 KCNS1Q96KK3 526 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 TMEM191AQ9H0A3 160 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 TP53TG3Q9ULZ0 132 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 TSSC4Q9Y5U2 329 aaPredicted RBP3.31□□□□□ -1.88
SRP54-212ENST00000556992 U3KQK5 164 aa3.31□□□□□ -1.88
SRP54-212ENST00000556992 A0A0J9YX75 114 aa3.3□□□□□ -1.88
SRP54-212ENST00000556992 OR4C46A6NHA9 309 aa3.3□□□□□ -1.88
SRP54-212ENST00000556992 PCP4L1A6NKN8 68 aa3.3□□□□□ -1.88
SRP54-212ENST00000556992 KLLNB2CW77 178 aa3.3□□□□□ -1.88
SRP54-212ENST00000556992 INAFM1C9JVW0 142 aa3.3□□□□□ -1.88
SRP54-212ENST00000556992 CCL24O00175 119 aa3.3□□□□□ -1.88
SRP54-212ENST00000556992 ZNF324O75467 553 aaPredicted RBP3.3□□□□□ -1.88
SRP54-212ENST00000556992 CSN3P07498 182 aa3.3□□□□□ -1.88
SRP54-212ENST00000556992 BTF3P20290 206 aaKnown RBP3.3□□□□□ -1.88
SRP54-212ENST00000556992 S100A4P26447 101 aaKnown RBP3.3□□□□□ -1.88
SRP54-212ENST00000556992 CKS2P33552 79 aa3.3□□□□□ -1.88
SRP54-212ENST00000556992 ASIPP42127 132 aa3.3□□□□□ -1.88
SRP54-212ENST00000556992 TFPI2P48307 235 aa3.3□□□□□ -1.88
SRP54-212ENST00000556992 AMTP48728 403 aa3.3□□□□□ -1.88
SRP54-212ENST00000556992 SSTP61278 116 aa3.3□□□□□ -1.88
SRP54-212ENST00000556992 DEFB114Q30KQ6 69 aa3.3□□□□□ -1.88
SRP54-212ENST00000556992 SPANXN1Q5VSR9 72 aa3.3□□□□□ -1.88
SRP54-212ENST00000556992 FAM159AQ6UWV7 190 aa3.3□□□□□ -1.88
SRP54-212ENST00000556992 FOXI2Q6ZQN5 318 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms