RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 Q6ZQT7 251 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 NEGR1Q7Z3B1 354 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 CYB561D1Q8N8Q1 229 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 STOML3Q8TAV4 291 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 VSIG2Q96IQ7 327 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 C8orf49Q96NF6 230 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 TXNDC17Q9BRA2 123 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 SH3BGRL3Q9H299 93 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 EPDR1Q9UM22 224 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 A0A1B0GVY2 172 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 A0A1W2PRE2 83 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 F6UZH7 168 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 ARPC5O15511 151 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 GNRH2O43555 120 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 GNG5P63218 68 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 FLI1Q01543 452 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-222ENST00000556768 SH2D6Q7Z4S9 175 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 PRNTQ86SH4 94 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 SUN5Q8TC36 379 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 DAZAP1Q96EP5 407 aaKnown RBP5.07□□□□□ -1.6
SCFD1-222ENST00000556768 SGK494Q96LW2 274 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 PSG8Q9UQ74 426 aa5.07□□□□□ -1.6
SCFD1-222ENST00000556768 TRAV4A0A0B4J268 109 aa5.06□□□□□ -1.6
SCFD1-222ENST00000556768 CTXND1A0A1B0GTU2 59 aa5.06□□□□□ -1.6
SCFD1-222ENST00000556768 K7EP13 123 aa5.06□□□□□ -1.6
SCFD1-222ENST00000556768 CIDEAO60543 219 aa5.06□□□□□ -1.6
SCFD1-222ENST00000556768 GCGP01275 180 aa5.06□□□□□ -1.6
SCFD1-222ENST00000556768 PFN1P07737 140 aaKnown RBP5.06□□□□□ -1.6
SCFD1-222ENST00000556768 S100A4P26447 101 aaKnown RBP5.06□□□□□ -1.6
SCFD1-222ENST00000556768 FHL2Q14192 279 aa5.06□□□□□ -1.6
SCFD1-222ENST00000556768 ZNF876PQ49A33 203 aa5.06□□□□□ -1.6
SCFD1-222ENST00000556768 TMEM75Q8N9X5 138 aa5.06□□□□□ -1.6
SCFD1-222ENST00000556768 ZNF479Q96JC4 524 aa5.06□□□□□ -1.6
SCFD1-222ENST00000556768 TM2D2Q9BX73 214 aa5.06□□□□□ -1.6
SCFD1-222ENST00000556768 DNAH17Q9UFH2 4485 aa5.05□□□□□ -1.6
SCFD1-222ENST00000556768 IGHV3-16A0A0C4DH30 117 aa5.05□□□□□ -1.6
SCFD1-222ENST00000556768 RNF222A6NCQ9 220 aa5.05□□□□□ -1.6
SCFD1-222ENST00000556768 NXPH4O95158 308 aa5.05□□□□□ -1.6
SCFD1-222ENST00000556768 SFTA3P0C7M3 94 aa5.05□□□□□ -1.6
SCFD1-222ENST00000556768 EVI2AP22794 236 aa5.05□□□□□ -1.6
SCFD1-222ENST00000556768 HIST1H2BAQ96A08 127 aa5.05□□□□□ -1.6
SCFD1-222ENST00000556768 FABP5P3A8MUU1 101 aa5.04□□□□□ -1.6
SCFD1-222ENST00000556768 C16orf90A8MZG2 172 aa5.04□□□□□ -1.6
SCFD1-222ENST00000556768 GGTLC3B5MD39 225 aa5.04□□□□□ -1.6
SCFD1-222ENST00000556768 K7EQD1 137 aa5.04□□□□□ -1.6
SCFD1-222ENST00000556768 TYMSP04818 313 aa5.04□□□□□ -1.6
SCFD1-222ENST00000556768 UBE2G2P60604 165 aa5.04□□□□□ -1.6
SCFD1-222ENST00000556768 BLOC1S1P78537 153 aa5.04□□□□□ -1.6
SCFD1-222ENST00000556768 LYPD5Q6UWN5 251 aa5.04□□□□□ -1.6
SCFD1-222ENST00000556768 NFE4Q86UQ8 179 aa5.04□□□□□ -1.6
SCFD1-222ENST00000556768 NHLRC2Q8NBF2 726 aa5.04□□□□□ -1.6
SCFD1-222ENST00000556768 TVP23CQ96ET8 276 aa5.04□□□□□ -1.6
SCFD1-222ENST00000556768 LY96Q9Y6Y9 160 aa5.04□□□□□ -1.6
SCFD1-222ENST00000556768 PKD1P98161 4303 aa5.04□□□□□ -1.6
SCFD1-222ENST00000556768 UBE2G1P62253 170 aa5.04□□□□□ -1.6
SCFD1-222ENST00000556768 EIF5AP63241 154 aaKnown RBP5.04□□□□□ -1.6
SCFD1-222ENST00000556768 TCEAL7Q9BRU2 100 aa5.04□□□□□ -1.6
SCFD1-222ENST00000556768 PRADC1Q9BSG0 188 aa5.04□□□□□ -1.6
SCFD1-222ENST00000556768 ZFP30Q9Y2G7 519 aa5.04□□□□□ -1.6
SCFD1-222ENST00000556768 A0A0D9SG52 128 aa5.03□□□□□ -1.6
SCFD1-222ENST00000556768 KANTRA0A1W2PQU2 76 aa5.03□□□□□ -1.6
SCFD1-222ENST00000556768 MAP1LC3B2A6NCE7 125 aa5.03□□□□□ -1.6
SCFD1-222ENST00000556768 UMAD1C9J7I0 102 aa5.03□□□□□ -1.6
SCFD1-222ENST00000556768 PEX7O00628 323 aa5.03□□□□□ -1.6
SCFD1-222ENST00000556768 FGF8P55075 233 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-222ENST00000556768 C10orf126Q8N4M7 172 aa5.03□□□□□ -1.6
SCFD1-222ENST00000556768 MAP1LC3BQ9GZQ8 125 aa5.03□□□□□ -1.6
SCFD1-222ENST00000556768 HERC2O95714 4834 aa5.03□□□□□ -1.6
SCFD1-222ENST00000556768 KIAA1109Q2LD37 5005 aa5.03□□□□□ -1.6
SCFD1-222ENST00000556768 FAM74A7A6NL05 159 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 MGST1P10620 155 aaKnown RBP5.02□□□□□ -1.61
SCFD1-222ENST00000556768 ASIPP42127 132 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 ZNF345Q14585 488 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 RHOHQ15669 191 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 WDR73Q6P4I2 378 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 SFT2D1Q8WV19 159 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 FMC1Q96HJ9 113 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 LINC00479Q96M42 142 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 ARL2-SNX15V9GYD0 113 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 TRAV8-6A0A0B4J262 113 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 TRBV6-4A0A1B0GX49 114 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 HMSDA8MTL9 139 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 A8MWV9 139 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 B4DEV8 164 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 PFDN1O60925 122 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 IGLV2-11P01706 119 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 SEC11BP0C7V7 166 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 FHITP49789 147 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 ZNF80P51504 273 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-222ENST00000556768 LINC00315P59091 139 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 ZNF726P1Q15940 193 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 LGALSLQ3ZCW2 172 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-222ENST00000556768 FAM162BQ5T6X4 162 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 CFAP126Q5VTH2 177 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 KCNRGQ8N5I3 272 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 PTH2Q96A98 100 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 ZNF471Q9BX82 626 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-222ENST00000556768 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
SCFD1-222ENST00000556768 TEX46H3BTG2 121 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms