RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 WNT9BO14905 357 aa4.54□□□□□ -1.68
TDP1-215ENST00000556498 IGHV3-30P01768 117 aa4.54□□□□□ -1.68
TDP1-215ENST00000556498 IGHV3-9P01782 118 aa4.54□□□□□ -1.68
TDP1-215ENST00000556498 IGHV3-30-5P0DP03 117 aa4.54□□□□□ -1.68
TDP1-215ENST00000556498 Q1RN00 199 aa4.54□□□□□ -1.68
TDP1-215ENST00000556498 C6orf99Q4VX62 202 aa4.54□□□□□ -1.68
TDP1-215ENST00000556498 SPANXN1Q5VSR9 72 aa4.54□□□□□ -1.68
TDP1-215ENST00000556498 C11orf72Q8NBR9 251 aa4.54□□□□□ -1.68
TDP1-215ENST00000556498 SPRR3Q9UBC9 169 aa4.54□□□□□ -1.68
TDP1-215ENST00000556498 GREB1Q4ZG55 1949 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 IGHV6-1A0A0B4J1U7 121 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 A6NN06 94 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 ZNF815PA8K554 130 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 F8VRH5 84 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 F8WEM9 126 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 COX7A2P2O60397 106 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 IGHV4-39P01824 125 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 IGHV4-34P06331 123 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 CD28P10747 220 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 MIFP14174 115 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 RNASE4P34096 147 aaKnown RBP4.53□□□□□ -1.68
TDP1-215ENST00000556498 FXYD4P59646 89 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 CCL14Q16627 93 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 ATP1A1-AS1Q5TC04 95 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 SCXQ7RTU7 201 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 LINC00269Q8N2A0 174 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 ZNF491Q8N8L2 437 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 PFN4Q8NHR9 129 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 RNF185Q96GF1 192 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 C1orf147Q96MC9 270 aaPredicted RBP4.53□□□□□ -1.68
TDP1-215ENST00000556498 SMAD5-AS1Q9Y6J3 95 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 SCN2AQ99250 2005 aa4.53□□□□□ -1.68
TDP1-215ENST00000556498 IGKV1D-8A0A087WSZ0 117 aa4.52□□□□□ -1.69
TDP1-215ENST00000556498 TRAV40A0A0B4J280 105 aa4.52□□□□□ -1.69
TDP1-215ENST00000556498 IGKV1D-13A0A0B4J2D9 117 aa4.52□□□□□ -1.69
TDP1-215ENST00000556498 PMS2P5A8MQ11 134 aa4.52□□□□□ -1.69
TDP1-215ENST00000556498 K7EMI3 77 aa4.52□□□□□ -1.69
TDP1-215ENST00000556498 WISP2O76076 250 aa4.52□□□□□ -1.69
TDP1-215ENST00000556498 IGKV1-13P0DP09 117 aa4.52□□□□□ -1.69
TDP1-215ENST00000556498 ZNF138P52744 262 aa4.52□□□□□ -1.69
TDP1-215ENST00000556498 FHL1Q13642 323 aa4.52□□□□□ -1.69
TDP1-215ENST00000556498 MORN5Q5VZ52 161 aa4.52□□□□□ -1.69
TDP1-215ENST00000556498 TMEM141Q96I45 108 aa4.52□□□□□ -1.69
TDP1-215ENST00000556498 PROK2Q9HC23 129 aa4.52□□□□□ -1.69
TDP1-215ENST00000556498 RAI1Q7Z5J4 1906 aaPredicted RBP4.52□□□□□ -1.69
TDP1-215ENST00000556498 DOCK8Q8NF50 2099 aa4.52□□□□□ -1.69
TDP1-215ENST00000556498 IGLV3-10A0A075B6K4 115 aa4.51□□□□□ -1.69
TDP1-215ENST00000556498 IGHV1-69DA0A0B4J2H0 117 aa4.51□□□□□ -1.69
TDP1-215ENST00000556498 A0A0J9YY99 117 aa4.51□□□□□ -1.69
TDP1-215ENST00000556498 FAM72CH0Y354 149 aa4.51□□□□□ -1.69
TDP1-215ENST00000556498 DNAL4O96015 105 aa4.51□□□□□ -1.69
TDP1-215ENST00000556498 PRSS2P07478 247 aa4.51□□□□□ -1.69
TDP1-215ENST00000556498 IAPPP10997 89 aa4.51□□□□□ -1.69
TDP1-215ENST00000556498 LINC00205P59089 165 aa4.51□□□□□ -1.69
TDP1-215ENST00000556498 FAM72AQ5TYM5 149 aa4.51□□□□□ -1.69
TDP1-215ENST00000556498 FAM72DQ6L9T8 149 aa4.51□□□□□ -1.69
TDP1-215ENST00000556498 FAM53AQ6NSI3 398 aaPredicted RBP4.51□□□□□ -1.69
TDP1-215ENST00000556498 SFTA2Q6UW10 78 aa4.51□□□□□ -1.69
TDP1-215ENST00000556498 MAP6D1Q9H9H5 199 aa4.51□□□□□ -1.69
TDP1-215ENST00000556498 PTPRBP23467 1997 aa4.51□□□□□ -1.69
TDP1-215ENST00000556498 ANAPC1Q9H1A4 1944 aa4.5□□□□□ -1.69
TDP1-215ENST00000556498 A0A0J9YXV3 536 aa4.5□□□□□ -1.69
TDP1-215ENST00000556498 TRBV6-1A0A0K0K1D8 114 aa4.5□□□□□ -1.69
TDP1-215ENST00000556498 C12orf77C9JDV5 145 aa4.5□□□□□ -1.69
TDP1-215ENST00000556498 CCL22O00626 93 aa4.5□□□□□ -1.69
TDP1-215ENST00000556498 CISD3P0C7P0 127 aa4.5□□□□□ -1.69
TDP1-215ENST00000556498 CXCL17Q6UXB2 119 aa4.5□□□□□ -1.69
TDP1-215ENST00000556498 PRNTQ86SH4 94 aa4.5□□□□□ -1.69
TDP1-215ENST00000556498 ITLN1Q8WWA0 313 aa4.5□□□□□ -1.69
TDP1-215ENST00000556498 ITLN2Q8WWU7 325 aaPredicted RBP4.5□□□□□ -1.69
TDP1-215ENST00000556498 CLEC2BQ92478 149 aa4.5□□□□□ -1.69
TDP1-215ENST00000556498 FAM167A-AS1Q96KT0 104 aa4.5□□□□□ -1.69
TDP1-215ENST00000556498 TTTY13Q9BZ97 58 aa4.5□□□□□ -1.69
TDP1-215ENST00000556498 ICOSQ9Y6W8 199 aa4.5□□□□□ -1.69
TDP1-215ENST00000556498 KIAA1549Q9HCM3 1950 aa4.5□□□□□ -1.69
TDP1-215ENST00000556498 DOCK4Q8N1I0 1966 aa4.49□□□□□ -1.69
TDP1-215ENST00000556498 TRGV8A0A0C4DH27 118 aa4.49□□□□□ -1.69
TDP1-215ENST00000556498 M0R135 149 aa4.49□□□□□ -1.69
TDP1-215ENST00000556498 PPP1R17O96001 155 aa4.49□□□□□ -1.69
TDP1-215ENST00000556498 COX6B1P14854 86 aa4.49□□□□□ -1.69
TDP1-215ENST00000556498 EDDM3BP56851 147 aa4.49□□□□□ -1.69
TDP1-215ENST00000556498 TFF3Q07654 80 aa4.49□□□□□ -1.69
TDP1-215ENST00000556498 SYCNQ0VAF6 134 aa4.49□□□□□ -1.69
TDP1-215ENST00000556498 Q8N7P7 452 aa4.49□□□□□ -1.69
TDP1-215ENST00000556498 TRBV5-4A0A0C4DH59 114 aa4.48□□□□□ -1.69
TDP1-215ENST00000556498 A0A0J9YX75 114 aa4.48□□□□□ -1.69
TDP1-215ENST00000556498 ZNHIT1O43257 154 aa4.48□□□□□ -1.69
TDP1-215ENST00000556498 IGHV4-31P0DP07 118 aa4.48□□□□□ -1.69
TDP1-215ENST00000556498 SEC61BP60468 96 aaKnown RBP4.48□□□□□ -1.69
TDP1-215ENST00000556498 C11orf71Q6IPW1 123 aa4.48□□□□□ -1.69
TDP1-215ENST00000556498 SOSTDC1Q6X4U4 206 aa4.48□□□□□ -1.69
TDP1-215ENST00000556498 Q8N6K4 173 aa4.48□□□□□ -1.69
TDP1-215ENST00000556498 CCL4L1Q8NHW4 92 aa4.48□□□□□ -1.69
TDP1-215ENST00000556498 LIMD2Q9BT23 127 aa4.48□□□□□ -1.69
TDP1-215ENST00000556498 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
TDP1-215ENST00000556498 C11orf21Q9P2W6 132 aa4.48□□□□□ -1.69
TDP1-215ENST00000556498 PTPRDP23468 1912 aa4.48□□□□□ -1.69
TDP1-215ENST00000556498 GTF3C1Q12789 2109 aa4.48□□□□□ -1.69
TDP1-215ENST00000556498 IGHV3OR16-10A0A075B7F0 116 aa4.47□□□□□ -1.69
TDP1-215ENST00000556498 SDHAF1A6NFY7 115 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms