RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 BIN3Q9NQY0 253 aa1.14□□□□□ -2.23
CDKN3-210ENST00000556305 ARHGAP5Q13017 1502 aa1.14□□□□□ -2.23
CDKN3-210ENST00000556305 ZNF469Q96JG9 3925 aaPredicted RBP1.14□□□□□ -2.23
CDKN3-210ENST00000556305 KMT2AQ03164 3969 aa1.14□□□□□ -2.23
CDKN3-210ENST00000556305 PKDREJQ9NTG1 2253 aa1.13□□□□□ -2.23
CDKN3-210ENST00000556305 TRRAPQ9Y4A5 3859 aa1.13□□□□□ -2.23
CDKN3-210ENST00000556305 FAT3Q8TDW7 4589 aa1.13□□□□□ -2.23
CDKN3-210ENST00000556305 A0A087WSZ3 146 aa1.13□□□□□ -2.23
CDKN3-210ENST00000556305 OR2T8A6NH00 312 aa1.13□□□□□ -2.23
CDKN3-210ENST00000556305 LYRM1O43325 122 aa1.13□□□□□ -2.23
CDKN3-210ENST00000556305 HIST1H2BKO60814 126 aa1.13□□□□□ -2.23
CDKN3-210ENST00000556305 HIST1H2BJP06899 126 aa1.13□□□□□ -2.23
CDKN3-210ENST00000556305 CXCL8P10145 99 aa1.13□□□□□ -2.23
CDKN3-210ENST00000556305 TAS2R41P59536 307 aa1.13□□□□□ -2.23
CDKN3-210ENST00000556305 GRINAQ7Z429 371 aa1.13□□□□□ -2.23
CDKN3-210ENST00000556305 LYG2Q86SG7 212 aa1.13□□□□□ -2.23
CDKN3-210ENST00000556305 POP5Q969H6 163 aaKnown RBP1.13□□□□□ -2.23
CDKN3-210ENST00000556305 RAB37Q96AX2 223 aa1.13□□□□□ -2.23
CDKN3-210ENST00000556305 GPX7Q96SL4 187 aaPredicted RBP1.13□□□□□ -2.23
CDKN3-210ENST00000556305 PRRT1Q99946 306 aa1.13□□□□□ -2.23
CDKN3-210ENST00000556305 BOLA2Q9H3K6 86 aa1.13□□□□□ -2.23
CDKN3-210ENST00000556305 GID8Q9NWU2 228 aa1.13□□□□□ -2.23
CDKN3-210ENST00000556305 SS18L2Q9UHA2 77 aa1.13□□□□□ -2.23
CDKN3-210ENST00000556305 TNFSF18Q9UNG2 199 aa1.13□□□□□ -2.23
CDKN3-210ENST00000556305 TSC2P49815 1807 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 NCOA6Q14686 2063 aaPredicted RBP1.12□□□□□ -2.23
CDKN3-210ENST00000556305 URB1O60287 2271 aaKnown RBP1.12□□□□□ -2.23
CDKN3-210ENST00000556305 KDM3BQ7LBC6 1761 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 SYCP2Q9BX26 1530 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 TRAV27A0A087WT01 109 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 GPR31O00270 319 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 NCR3O14931 201 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 PFDN1O60925 122 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 COX7CP15954 63 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 ARPP19P56211 112 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 VBP1P61758 197 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 KLRD1Q13241 179 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 TRIQKQ629K1 86 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 PLPP5Q8NEB5 264 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 NEK7Q8TDX7 302 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 HYLS1Q96M11 299 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 RTL8AQ9BWD3 113 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 UFC1Q9Y3C8 167 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 MYH2Q9UKX2 1941 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 CMYA5Q8N3K9 4069 aa1.12□□□□□ -2.23
CDKN3-210ENST00000556305 PARP4Q9UKK3 1724 aaKnown RBP1.12□□□□□ -2.23
CDKN3-210ENST00000556305 MUC4Q99102 2169 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 ROCK1Q13464 1354 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 C5P01031 1676 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 DSTQ03001 7570 aaKnown RBP1.11□□□□□ -2.23
CDKN3-210ENST00000556305 RER1O15258 196 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 CXCL1P09341 107 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 INSL3P51460 131 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 C1orf134Q5TEV5 83 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 C1orf140Q5VVS0 124 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 C3orf33Q6P1S2 294 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 HAGHLQ6PII5 290 aaPredicted RBP1.11□□□□□ -2.23
CDKN3-210ENST00000556305 PATE2Q6UY27 113 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 OR5AS1Q8N127 324 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 LRRC18Q8N456 261 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 SMIM20Q8N5G0 67 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 FAM24BQ8N5W8 94 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 OR10AG1Q8NH19 301 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 PLEKHB2Q96CS7 222 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 TMEM138Q9NPI0 162 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 FRAS1Q86XX4 4008 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 HECTD4Q9Y4D8 3996 aa1.11□□□□□ -2.23
CDKN3-210ENST00000556305 SNRNP200O75643 2136 aaKnown RBP1.1□□□□□ -2.23
CDKN3-210ENST00000556305 USP54Q70EL1 1684 aa1.1□□□□□ -2.23
CDKN3-210ENST00000556305 ROS1P08922 2347 aa1.1□□□□□ -2.23
CDKN3-210ENST00000556305 CHD3Q12873 2000 aaKnown RBP1.1□□□□□ -2.23
CDKN3-210ENST00000556305 PKHD1P08F94 4074 aa1.1□□□□□ -2.23
CDKN3-210ENST00000556305 MON2Q7Z3U7 1717 aa1.1□□□□□ -2.23
CDKN3-210ENST00000556305 MYO5CQ9NQX4 1742 aa1.1□□□□□ -2.23
CDKN3-210ENST00000556305 TMEM238C9JI98 176 aa1.1□□□□□ -2.23
CDKN3-210ENST00000556305 PPP5D1E7EU14 171 aa1.1□□□□□ -2.23
CDKN3-210ENST00000556305 MFSD11O43934 449 aa1.1□□□□□ -2.23
CDKN3-210ENST00000556305 CST7O76096 145 aa1.1□□□□□ -2.23
CDKN3-210ENST00000556305 SERPINB1P30740 379 aa1.1□□□□□ -2.23
CDKN3-210ENST00000556305 CIRBPQ14011 172 aaKnown RBP1.1□□□□□ -2.23
CDKN3-210ENST00000556305 RTL8BQ17RB0 113 aa1.1□□□□□ -2.23
CDKN3-210ENST00000556305 ARPINQ7Z6K5 226 aa1.1□□□□□ -2.23
CDKN3-210ENST00000556305 NUP98P52948 1817 aa1.1□□□□□ -2.23
CDKN3-210ENST00000556305 LMO7Q8WWI1 1683 aa1.1□□□□□ -2.23
CDKN3-210ENST00000556305 LRRC37AA6NMS7 1700 aa1.09□□□□□ -2.23
CDKN3-210ENST00000556305 XRN1Q8IZH2 1706 aaKnown RBP1.09□□□□□ -2.23
CDKN3-210ENST00000556305 MYH3P11055 1940 aa1.09□□□□□ -2.23
CDKN3-210ENST00000556305 KIAA1549Q9HCM3 1950 aa1.09□□□□□ -2.23
CDKN3-210ENST00000556305 TRPM1Q7Z4N2 1603 aa1.09□□□□□ -2.23
CDKN3-210ENST00000556305 H3BQV1 296 aa1.09□□□□□ -2.23
CDKN3-210ENST00000556305 IDO1P14902 403 aa1.09□□□□□ -2.23
CDKN3-210ENST00000556305 RPL35P42766 123 aaKnown RBP1.09□□□□□ -2.23
CDKN3-210ENST00000556305 DYDC1Q8WWB3 177 aa1.09□□□□□ -2.23
CDKN3-210ENST00000556305 GGACTQ9BVM4 153 aa1.09□□□□□ -2.23
CDKN3-210ENST00000556305 TCEAL2Q9H3H9 227 aaPredicted RBP1.09□□□□□ -2.23
CDKN3-210ENST00000556305 MED11Q9P086 117 aa1.09□□□□□ -2.23
CDKN3-210ENST00000556305 MAP2P11137 1827 aaKnown RBP1.09□□□□□ -2.23
CDKN3-210ENST00000556305 MRC1P22897 1456 aa1.09□□□□□ -2.24
CDKN3-210ENST00000556305 CADP27708 2225 aa1.09□□□□□ -2.24
CDKN3-210ENST00000556305 ALS2Q96Q42 1657 aa1.09□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms