RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 PYYP10082 97 aa0.04□□□□□ -2.4
SCFD1-218ENST00000556256 TCTE3Q8IZS6 198 aa0.04□□□□□ -2.4
SCFD1-218ENST00000556256 BANF2Q9H503 90 aa0.04□□□□□ -2.4
SCFD1-218ENST00000556256 SPANXCQ9NY87 97 aa0.04□□□□□ -2.4
SCFD1-218ENST00000556256 CALML5Q9NZT1 146 aa0.04□□□□□ -2.4
SCFD1-218ENST00000556256 MYH1P12882 1939 aa0.04□□□□□ -2.4
SCFD1-218ENST00000556256 KDM6BO15054 1643 aa0.04□□□□□ -2.4
SCFD1-218ENST00000556256 AFDNP55196 1824 aaKnown RBP0.03□□□□□ -2.4
SCFD1-218ENST00000556256 TRAV17A0A0B4J275 112 aa0.03□□□□□ -2.4
SCFD1-218ENST00000556256 SMIM24O75264 130 aa0.03□□□□□ -2.4
SCFD1-218ENST00000556256 ELOF1P60002 83 aaKnown RBP0.03□□□□□ -2.4
SCFD1-218ENST00000556256 ESPL1Q14674 2120 aa0.03□□□□□ -2.4
SCFD1-218ENST00000556256 OR2T2Q6IF00 324 aa0.03□□□□□ -2.4
SCFD1-218ENST00000556256 VMO1Q7Z5L0 202 aa0.03□□□□□ -2.4
SCFD1-218ENST00000556256 ATP6V0E2Q8NHE4 81 aa0.03□□□□□ -2.4
SCFD1-218ENST00000556256 VPS25Q9BRG1 176 aa0.03□□□□□ -2.4
SCFD1-218ENST00000556256 MRPL40Q9NQ50 206 aaKnown RBP0.03□□□□□ -2.4
SCFD1-218ENST00000556256 SPANXA1Q9NS26 97 aa0.03□□□□□ -2.4
SCFD1-218ENST00000556256 BDP1A6H8Y1 2624 aa0.03□□□□□ -2.4
SCFD1-218ENST00000556256 CCDC171Q6TFL3 1326 aa0.03□□□□□ -2.4
SCFD1-218ENST00000556256 RBBP6Q7Z6E9 1792 aaKnown RBP0.03□□□□□ -2.4
SCFD1-218ENST00000556256 LRP1Q07954 4544 aaKnown RBP0.03□□□□□ -2.4
SCFD1-218ENST00000556256 TANC1Q9C0D5 1861 aa0.03□□□□□ -2.41
SCFD1-218ENST00000556256 TRAV12-2A0A075B6T6 113 aa0.02□□□□□ -2.41
SCFD1-218ENST00000556256 BORCS7-ASMTA0A0B4J1R7 106 aa0.02□□□□□ -2.41
SCFD1-218ENST00000556256 TFF1P04155 84 aa0.02□□□□□ -2.41
SCFD1-218ENST00000556256 SLC25A6P12236 298 aa0.02□□□□□ -2.41
SCFD1-218ENST00000556256 CMPK1P30085 196 aa0.02□□□□□ -2.41
SCFD1-218ENST00000556256 MORN2Q502X0 79 aa0.02□□□□□ -2.41
SCFD1-218ENST00000556256 ATP11AUNQ6ZP68 121 aa0.02□□□□□ -2.41
SCFD1-218ENST00000556256 MAGOHBQ96A72 148 aaKnown RBP0.02□□□□□ -2.41
SCFD1-218ENST00000556256 TMEM141Q96I45 108 aa0.02□□□□□ -2.41
SCFD1-218ENST00000556256 DSCR8Q96T75 97 aa0.02□□□□□ -2.41
SCFD1-218ENST00000556256 BET1LQ9NYM9 111 aa0.02□□□□□ -2.41
SCFD1-218ENST00000556256 PTPRMP28827 1452 aa0.02□□□□□ -2.41
SCFD1-218ENST00000556256 PTPRZ1P23471 2315 aaPredicted RBP0.02□□□□□ -2.41
SCFD1-218ENST00000556256 KDM5CP41229 1560 aa0.02□□□□□ -2.41
SCFD1-218ENST00000556256 OTOGQ6ZRI0 2925 aa0.01□□□□□ -2.41
SCFD1-218ENST00000556256 MCRIP1C9JLW8 97 aa0.01□□□□□ -2.41
SCFD1-218ENST00000556256 CCDC153Q494R4 210 aa0.01□□□□□ -2.41
SCFD1-218ENST00000556256 NDUFA11Q86Y39 141 aa0.01□□□□□ -2.41
SCFD1-218ENST00000556256 SNX29P2Q8IUI4 249 aa0.01□□□□□ -2.41
SCFD1-218ENST00000556256 DYNLRB2Q8TF09 96 aa0.01□□□□□ -2.41
SCFD1-218ENST00000556256 HELZP42694 1942 aaKnown RBP0.01□□□□□ -2.41
SCFD1-218ENST00000556256 CELSR1Q9NYQ6 3014 aa0□□□□□ -2.41
SCFD1-218ENST00000556256 A0A087WTM6 91 aa0□□□□□ -2.41
SCFD1-218ENST00000556256 M0R2P5 195 aa0□□□□□ -2.41
SCFD1-218ENST00000556256 YPEL1O60688 119 aa0□□□□□ -2.41
SCFD1-218ENST00000556256 APOC1P02654 83 aa0□□□□□ -2.41
SCFD1-218ENST00000556256 RBP4P02753 201 aa0□□□□□ -2.41
SCFD1-218ENST00000556256 DBIP07108 87 aaKnown RBP0□□□□□ -2.41
SCFD1-218ENST00000556256 TPRP12270 2363 aaKnown RBP0□□□□□ -2.41
SCFD1-218ENST00000556256 CLLU1Q5K131 121 aa0□□□□□ -2.41
SCFD1-218ENST00000556256 SPAG17Q6Q759 2223 aa0□□□□□ -2.41
SCFD1-218ENST00000556256 PPP1R1CQ8WVI7 109 aa0□□□□□ -2.41
SCFD1-218ENST00000556256 COA4Q9NYJ1 87 aa0□□□□□ -2.41
SCFD1-218ENST00000556256 LSM2Q9Y333 95 aaKnown RBP0□□□□□ -2.41
SCFD1-218ENST00000556256 NOP16Q9Y3C1 178 aaKnown RBP0□□□□□ -2.41
SCFD1-218ENST00000556256 MAP2P11137 1827 aaKnown RBP-0.01□□□□□ -2.41
SCFD1-218ENST00000556256 CASZ1Q86V15 1759 aa-0.01□□□□□ -2.41
SCFD1-218ENST00000556256 SCGB1A1P11684 91 aa-0.01□□□□□ -2.41
SCFD1-218ENST00000556256 IFI27L1Q96BM0 104 aa-0.01□□□□□ -2.41
SCFD1-218ENST00000556256 ANK2Q01484 3957 aa-0.01□□□□□ -2.41
SCFD1-218ENST00000556256 HRNRQ86YZ3 2850 aaPredicted RBP-0.01□□□□□ -2.41
SCFD1-218ENST00000556256 IGSF10Q6WRI0 2623 aa-0.01□□□□□ -2.41
SCFD1-218ENST00000556256 ABCA1O95477 2261 aa-0.02□□□□□ -2.41
SCFD1-218ENST00000556256 ABCA4P78363 2273 aa-0.02□□□□□ -2.41
SCFD1-218ENST00000556256 SOGA1O94964 1423 aa-0.02□□□□□ -2.41
SCFD1-218ENST00000556256 ANKRD30AQ9BXX3 1397 aa-0.02□□□□□ -2.41
SCFD1-218ENST00000556256 GVQW2A0A096LPI5 108 aaPredicted RBP-0.02□□□□□ -2.41
SCFD1-218ENST00000556256 ZNF670-ZNF695F2Z2N8 137 aa-0.02□□□□□ -2.41
SCFD1-218ENST00000556256 DR1Q01658 176 aa-0.02□□□□□ -2.41
SCFD1-218ENST00000556256 ERG28Q9UKR5 140 aa-0.02□□□□□ -2.41
SCFD1-218ENST00000556256 PLXNA2O75051 1894 aa-0.02□□□□□ -2.41
SCFD1-218ENST00000556256 DMBT1Q9UGM3 2413 aaPredicted RBP-0.02□□□□□ -2.41
SCFD1-218ENST00000556256 CACNA1HO95180 2353 aa-0.02□□□□□ -2.41
SCFD1-218ENST00000556256 ZFYVE26Q68DK2 2539 aa-0.03□□□□□ -2.41
SCFD1-218ENST00000556256 COL7A1Q02388 2944 aa-0.03□□□□□ -2.41
SCFD1-218ENST00000556256 F8P00451 2351 aa-0.03□□□□□ -2.41
SCFD1-218ENST00000556256 TRBV20-1A0A075B6N2 111 aa-0.03□□□□□ -2.41
SCFD1-218ENST00000556256 TCRBV3S1A0A5B6 114 aa-0.03□□□□□ -2.41
SCFD1-218ENST00000556256 CCDC179H3BU77 68 aa-0.03□□□□□ -2.41
SCFD1-218ENST00000556256 J3QLW9 94 aa-0.03□□□□□ -2.41
SCFD1-218ENST00000556256 CCL3L1P16619 93 aa-0.03□□□□□ -2.41
SCFD1-218ENST00000556256 NPC2P61916 151 aa-0.03□□□□□ -2.41
SCFD1-218ENST00000556256 AKAP14Q86UN6 197 aa-0.03□□□□□ -2.41
SCFD1-218ENST00000556256 PRR15LQ9BU68 103 aa-0.03□□□□□ -2.41
SCFD1-218ENST00000556256 SYNJ1O43426 1573 aa-0.03□□□□□ -2.41
SCFD1-218ENST00000556256 CDK13Q14004 1512 aaKnown RBP-0.03□□□□□ -2.41
SCFD1-218ENST00000556256 UBR5O95071 2799 aaPredicted RBP-0.04□□□□□ -2.42
SCFD1-218ENST00000556256 MUC12Q9UKN1 5478 aa-0.04□□□□□ -2.42
SCFD1-218ENST00000556256 RBAKDNA6NC62 111 aa-0.04□□□□□ -2.42
SCFD1-218ENST00000556256 PYDC1Q8WXC3 89 aa-0.04□□□□□ -2.42
SCFD1-218ENST00000556256 AIF1LQ9BQI0 150 aa-0.04□□□□□ -2.42
SCFD1-218ENST00000556256 SPRR2GQ9BYE4 73 aa-0.04□□□□□ -2.42
SCFD1-218ENST00000556256 BPESC1Q9GZL8 116 aa-0.04□□□□□ -2.42
SCFD1-218ENST00000556256 ASXL3Q9C0F0 2248 aa-0.04□□□□□ -2.42
SCFD1-218ENST00000556256 NCOR2Q9Y618 2525 aa-0.04□□□□□ -2.42
SCFD1-218ENST00000556256 ERCC6Q03468 1493 aa-0.04□□□□□ -2.42
SCFD1-218ENST00000556256 ZNF142P52746 1687 aaPredicted RBP-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms