RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 ZNF331Q9NQX6 463 aaPredicted RBP4.71□□□□□ -1.66
PSEN1-216ENST00000556066 SMCO4Q9NRQ5 59 aa4.71□□□□□ -1.66
PSEN1-216ENST00000556066 TIMM8BQ9Y5J9 83 aaPredicted RBP4.71□□□□□ -1.66
PSEN1-216ENST00000556066 PXMP4Q9Y6I8 212 aa4.71□□□□□ -1.66
PSEN1-216ENST00000556066 TRAV5A0A0B4J249 113 aa4.7□□□□□ -1.66
PSEN1-216ENST00000556066 PLAC8L1A1L4L8 177 aa4.7□□□□□ -1.66
PSEN1-216ENST00000556066 PRAC2D3DTV9 90 aa4.7□□□□□ -1.66
PSEN1-216ENST00000556066 H7BYZ3 331 aa4.7□□□□□ -1.66
PSEN1-216ENST00000556066 MPDU1O75352 247 aa4.7□□□□□ -1.66
PSEN1-216ENST00000556066 IFNA1P01562 189 aa4.7□□□□□ -1.66
PSEN1-216ENST00000556066 OR5I1Q13606 314 aa4.7□□□□□ -1.66
PSEN1-216ENST00000556066 TMEM37Q8WXS4 190 aa4.7□□□□□ -1.66
PSEN1-216ENST00000556066 C16orf74Q96GX8 76 aa4.7□□□□□ -1.66
PSEN1-216ENST00000556066 DNAJC4Q9NNZ3 241 aa4.7□□□□□ -1.66
PSEN1-216ENST00000556066 VAX2Q9UIW0 290 aa4.7□□□□□ -1.66
PSEN1-216ENST00000556066 SRRM2Q9UQ35 2752 aaKnown RBP4.7□□□□□ -1.66
PSEN1-216ENST00000556066 DMBT1Q9UGM3 2413 aaPredicted RBP4.7□□□□□ -1.66
PSEN1-216ENST00000556066 HSPG2P98160 4391 aa4.69□□□□□ -1.66
PSEN1-216ENST00000556066 TRAV12-3A0A0B4J271 114 aa4.69□□□□□ -1.66
PSEN1-216ENST00000556066 GATCO43716 136 aaKnown RBP4.69□□□□□ -1.66
PSEN1-216ENST00000556066 IGLC2P0DOY2 106 aa4.69□□□□□ -1.66
PSEN1-216ENST00000556066 CCL18P55774 89 aa4.69□□□□□ -1.66
PSEN1-216ENST00000556066 RHEBQ15382 184 aa4.69□□□□□ -1.66
PSEN1-216ENST00000556066 C6orf226Q5I0X4 101 aa4.69□□□□□ -1.66
PSEN1-216ENST00000556066 GFI1BQ5VTD9 330 aa4.69□□□□□ -1.66
PSEN1-216ENST00000556066 ZNF493Q6ZR52 646 aa4.69□□□□□ -1.66
PSEN1-216ENST00000556066 C15orf54Q8N8G6 183 aa4.69□□□□□ -1.66
PSEN1-216ENST00000556066 OR1L4Q8NGR5 311 aa4.69□□□□□ -1.66
PSEN1-216ENST00000556066 TMEM263Q8WUH6 116 aaKnown RBP4.69□□□□□ -1.66
PSEN1-216ENST00000556066 HIST1H2BAQ96A08 127 aa4.69□□□□□ -1.66
PSEN1-216ENST00000556066 ISOC2Q96AB3 205 aa4.69□□□□□ -1.66
PSEN1-216ENST00000556066 SDF2L1Q9HCN8 221 aa4.69□□□□□ -1.66
PSEN1-216ENST00000556066 TNFRSF18Q9Y5U5 241 aa4.69□□□□□ -1.66
PSEN1-216ENST00000556066 GAGE12BA1L429 117 aa4.68□□□□□ -1.66
PSEN1-216ENST00000556066 SNURFLB1AK76 121 aa4.68□□□□□ -1.66
PSEN1-216ENST00000556066 GAGE7O76087 117 aa4.68□□□□□ -1.66
PSEN1-216ENST00000556066 GAGE12FP0CL80 117 aa4.68□□□□□ -1.66
PSEN1-216ENST00000556066 GAGE12GP0CL81 117 aa4.68□□□□□ -1.66
PSEN1-216ENST00000556066 GAGE12IP0CL82 117 aa4.68□□□□□ -1.66
PSEN1-216ENST00000556066 ARL14EPLP0DKL9 152 aa4.68□□□□□ -1.66
PSEN1-216ENST00000556066 CT45A10P0DMU9 189 aa4.68□□□□□ -1.66
PSEN1-216ENST00000556066 LEPP41159 167 aa4.68□□□□□ -1.66
PSEN1-216ENST00000556066 RPL29P47914 159 aaKnown RBP4.68□□□□□ -1.66
PSEN1-216ENST00000556066 KRTAP10-2P60368 255 aa4.68□□□□□ -1.66
PSEN1-216ENST00000556066 UBE2G2P60604 165 aa4.68□□□□□ -1.66
PSEN1-216ENST00000556066 MEF2BQ02080 365 aaPredicted RBP4.68□□□□□ -1.66
PSEN1-216ENST00000556066 ZNF575Q86XF7 245 aa4.68□□□□□ -1.66
PSEN1-216ENST00000556066 ZFP82Q8N141 532 aa4.68□□□□□ -1.66
PSEN1-216ENST00000556066 YPEL4Q96NS1 127 aa4.68□□□□□ -1.66
PSEN1-216ENST00000556066 PFDN5Q99471 154 aa4.68□□□□□ -1.66
PSEN1-216ENST00000556066 C20orf144Q9BQM9 153 aa4.68□□□□□ -1.66
PSEN1-216ENST00000556066 MANBALQ9NQG1 85 aa4.68□□□□□ -1.66
PSEN1-216ENST00000556066 ZNF586Q9NXT0 402 aa4.68□□□□□ -1.66
PSEN1-216ENST00000556066 A0A087WWC5 75 aa4.67□□□□□ -1.66
PSEN1-216ENST00000556066 A0A0J9YY99 117 aa4.67□□□□□ -1.66
PSEN1-216ENST00000556066 NBDYA0A0U1RRE5 68 aa4.67□□□□□ -1.66
PSEN1-216ENST00000556066 FBLL1A6NHQ2 334 aaKnown RBP4.67□□□□□ -1.66
PSEN1-216ENST00000556066 B5MCH6 92 aa4.67□□□□□ -1.66
PSEN1-216ENST00000556066 M0R3E3 92 aa4.67□□□□□ -1.66
PSEN1-216ENST00000556066 CXCL1P09341 107 aa4.67□□□□□ -1.66
PSEN1-216ENST00000556066 PYYP10082 97 aa4.67□□□□□ -1.66
PSEN1-216ENST00000556066 RAB4AP20338 218 aa4.67□□□□□ -1.66
PSEN1-216ENST00000556066 ERCC8Q13216 396 aa4.67□□□□□ -1.66
PSEN1-216ENST00000556066 MIR17HGQ75NE6 70 aa4.67□□□□□ -1.66
PSEN1-216ENST00000556066 ZNRF2Q8NHG8 242 aa4.67□□□□□ -1.66
PSEN1-216ENST00000556066 BLNKQ8WV28 456 aa4.67□□□□□ -1.66
PSEN1-216ENST00000556066 SMIM7Q9BQ49 75 aa4.67□□□□□ -1.66
PSEN1-216ENST00000556066 NAT8Q9UHE5 227 aa4.67□□□□□ -1.66
PSEN1-216ENST00000556066 LINC00588Q9Y4M8 146 aa4.67□□□□□ -1.66
PSEN1-216ENST00000556066 TRBV19A0A075B6N1 114 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 TGIF2-C20orf24A0A0A6YYL0 155 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 TMEM250H0YL14 139 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 CXorf1O96002 111 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 MT-ND4LP03901 98 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 RAB5AP20339 215 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 GCHFRP30047 84 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 RNASE4P34096 147 aaKnown RBP4.66□□□□□ -1.66
PSEN1-216ENST00000556066 RPL23P62829 140 aaKnown RBP4.66□□□□□ -1.66
PSEN1-216ENST00000556066 FLI1Q01543 452 aaPredicted RBP4.66□□□□□ -1.66
PSEN1-216ENST00000556066 ELOBQ15370 118 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 ADIRFQ15847 76 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 TMEM241Q24JQ0 296 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 Q6ZSN1 163 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 Q6ZTI0 123 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 EXOC3-AS1Q8N2X6 119 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 C6orf223Q8N319 242 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 ODF3Q96PU9 254 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 PYGO2Q9BRQ0 406 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 PARLQ9H300 379 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 AAMDCQ9H7C9 122 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 GSN-AS1Q9NRJ2 163 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 KCNIP2Q9NS61 270 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 RPH3ALQ9UNE2 315 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 FUT9Q9Y231 359 aa4.66□□□□□ -1.66
PSEN1-216ENST00000556066 TRGV2A0A075B6R0 118 aa4.65□□□□□ -1.67
PSEN1-216ENST00000556066 IGKV2-40A0A087WW87 121 aaPredicted RBP4.65□□□□□ -1.67
PSEN1-216ENST00000556066 TRGV1A0A0A0MS02 117 aa4.65□□□□□ -1.67
PSEN1-216ENST00000556066 C7orf71A4D174 169 aa4.65□□□□□ -1.67
PSEN1-216ENST00000556066 C16orf90A8MZG2 172 aa4.65□□□□□ -1.67
PSEN1-216ENST00000556066 C1orf196B1AJZ1 125 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms