RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ERCC8Q13216 396 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 RIGQ13278 110 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 COA6Q5JTJ3 125 aaKnown RBP5.12□□□□□ -1.59
SLIRP-204ENST00000555890 TMEM136Q6ZRR5 245 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 OR1N2Q8NGR9 330 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 C4orf3Q8WVX3 66 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 PGLYRP4Q96LB8 373 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 AGPAT4-IT1Q9H0P7 198 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 C16orf95Q9H693 158 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 LENEPQ9Y5L5 61 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 TMEM213A2RRL7 107 aa5.11□□□□□ -1.59
SLIRP-204ENST00000555890 C2orf70A6NJV1 201 aa5.11□□□□□ -1.59
SLIRP-204ENST00000555890 SOCS3O14543 225 aa5.11□□□□□ -1.59
SLIRP-204ENST00000555890 CRISP2P16562 243 aa5.11□□□□□ -1.59
SLIRP-204ENST00000555890 CRIP1P50238 77 aa5.11□□□□□ -1.59
SLIRP-204ENST00000555890 SYNJ2BPP57105 145 aa5.11□□□□□ -1.59
SLIRP-204ENST00000555890 PAFAH1B2P68402 229 aa5.11□□□□□ -1.59
SLIRP-204ENST00000555890 HBBP68871 147 aa5.11□□□□□ -1.59
SLIRP-204ENST00000555890 KLF5Q13887 457 aaPredicted RBP5.11□□□□□ -1.59
SLIRP-204ENST00000555890 ZNF124Q15973 351 aa5.11□□□□□ -1.59
SLIRP-204ENST00000555890 DEFB121Q5J5C9 76 aa5.11□□□□□ -1.59
SLIRP-204ENST00000555890 IL17DQ8TAD2 202 aa5.11□□□□□ -1.59
SLIRP-204ENST00000555890 Q8TAT8 98 aa5.11□□□□□ -1.59
SLIRP-204ENST00000555890 IGKV3-7A0A075B6H7 116 aa5.1□□□□□ -1.59
SLIRP-204ENST00000555890 TRBV7-9A0A0J9YWB2 115 aa5.1□□□□□ -1.59
SLIRP-204ENST00000555890 A0A1B0GUT8 65 aa5.1□□□□□ -1.59
SLIRP-204ENST00000555890 A0A1B0GXF2 115 aa5.1□□□□□ -1.59
SLIRP-204ENST00000555890 ORM1P02763 201 aa5.1□□□□□ -1.59
SLIRP-204ENST00000555890 NHLRC4P0CG21 123 aaPredicted RBP5.1□□□□□ -1.59
SLIRP-204ENST00000555890 SNRPD3P62318 126 aaKnown RBP5.1□□□□□ -1.59
SLIRP-204ENST00000555890 BAGE3Q86Y29 109 aa5.1□□□□□ -1.59
SLIRP-204ENST00000555890 HIST3H2BBQ8N257 126 aa5.1□□□□□ -1.59
SLIRP-204ENST00000555890 KLHL30-AS1Q8NEE0 82 aa5.1□□□□□ -1.59
SLIRP-204ENST00000555890 OR11H1Q8NG94 326 aa5.1□□□□□ -1.59
SLIRP-204ENST00000555890 OR8A1Q8NGG7 326 aa5.1□□□□□ -1.59
SLIRP-204ENST00000555890 GTSF1Q8WW33 167 aa5.1□□□□□ -1.59
SLIRP-204ENST00000555890 RNF183Q96D59 192 aa5.1□□□□□ -1.59
SLIRP-204ENST00000555890 C20orf173Q96LM9 149 aa5.1□□□□□ -1.59
SLIRP-204ENST00000555890 B9D2Q9BPU9 175 aa5.1□□□□□ -1.59
SLIRP-204ENST00000555890 TMSB15BA0A087X1C1 80 aa5.09□□□□□ -1.59
SLIRP-204ENST00000555890 F2Z2F3 143 aa5.09□□□□□ -1.59
SLIRP-204ENST00000555890 NDUFA7O95182 113 aa5.09□□□□□ -1.59
SLIRP-204ENST00000555890 FRMD6-AS1P0C7T7 363 aa5.09□□□□□ -1.59
SLIRP-204ENST00000555890 GZMBP10144 247 aa5.09□□□□□ -1.59
SLIRP-204ENST00000555890 ZNF80P51504 273 aaPredicted RBP5.09□□□□□ -1.59
SLIRP-204ENST00000555890 Q0VG73 95 aa5.09□□□□□ -1.59
SLIRP-204ENST00000555890 TCTEX1D4Q5JR98 221 aa5.09□□□□□ -1.59
SLIRP-204ENST00000555890 OR10J3Q5JRS4 329 aa5.09□□□□□ -1.59
SLIRP-204ENST00000555890 EBLN2Q6P2I7 272 aa5.09□□□□□ -1.59
SLIRP-204ENST00000555890 TMEM18Q96B42 140 aa5.09□□□□□ -1.59
SLIRP-204ENST00000555890 TPPP3Q9BW30 176 aa5.09□□□□□ -1.59
SLIRP-204ENST00000555890 GPR61Q9BZJ8 451 aa5.09□□□□□ -1.59
SLIRP-204ENST00000555890 MS4A6AQ9H2W1 248 aa5.09□□□□□ -1.59
SLIRP-204ENST00000555890 TSSC4Q9Y5U2 329 aaPredicted RBP5.09□□□□□ -1.59
SLIRP-204ENST00000555890 KMT2AQ03164 3969 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 TRAV2A0A0B4J234 112 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 TRAV21A0A0B4J279 112 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 K7EQG2 157 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 DUSP14O95147 198 aaKnown RBP5.08□□□□□ -1.6
SLIRP-204ENST00000555890 GPX1P07203 203 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 SMIM6P0DI80 62 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 FABP4P15090 132 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 SRIP30626 198 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 TFPI2P48307 235 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 DEFB136Q30KP8 78 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 KIAA1644Q3SXP7 199 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 PDZD11Q5EBL8 140 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 GDF5OSQ5U4N7 250 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 GFI1BQ5VTD9 330 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 LYZL1Q6UWQ5 148 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 C18orf65Q6ZTR6 163 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 LINC00518Q8N0U6 118 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 FER1L6-AS1Q8NA97 138 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 OR9G4Q8NGQ1 327 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 LINC01006Q8NI28 216 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 DYNLRB2Q8TF09 96 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 DCANP1Q8TF63 244 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 FAM110AQ9BQ89 295 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 TM2D2Q9BX73 214 aa5.08□□□□□ -1.6
SLIRP-204ENST00000555890 A4D1N5 150 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 GRIFINA4D1Z8 144 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 CCL24O00175 119 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 ARMS2P0C7Q2 107 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 ZNF688P0C7X2 276 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 IGLC6P0CF74 106 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 ZNF705DP0CH99 300 aaPredicted RBP5.07□□□□□ -1.6
SLIRP-204ENST00000555890 ZNF705BP0CI00 300 aaPredicted RBP5.07□□□□□ -1.6
SLIRP-204ENST00000555890 CD28P10747 220 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 TSPOP30536 169 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 CTRLP40313 264 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 LEPP41159 167 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 SLAQ13239 276 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 PSMG4Q5JS54 123 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 GATD1Q8NB37 220 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 OR10D4PQ8NGN7 298 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 DLX4Q92988 240 aaPredicted RBP5.07□□□□□ -1.6
SLIRP-204ENST00000555890 FAM19A4Q96LR4 140 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 PACRGQ96M98 296 aaPredicted RBP5.07□□□□□ -1.6
SLIRP-204ENST00000555890 ODF3Q96PU9 254 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 HIST1H2BLQ99880 126 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms