RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 SRSF1Q07955 248 aaKnown RBP eCLIP6.81□□□□□ -1.32
SYNE2-217ENST00000555022 Q6ZSV7 163 aa6.81□□□□□ -1.32
SYNE2-217ENST00000555022 C16orf92Q96LL3 132 aa6.81□□□□□ -1.32
SYNE2-217ENST00000555022 PHLDA3Q9Y5J5 127 aa6.81□□□□□ -1.32
SYNE2-217ENST00000555022 TCF15Q12870 199 aa6.81□□□□□ -1.32
SYNE2-217ENST00000555022 NTN5Q8WTR8 489 aaPredicted RBP6.81□□□□□ -1.32
SYNE2-217ENST00000555022 SMIM2Q9BVW6 85 aa6.81□□□□□ -1.32
SYNE2-217ENST00000555022 ZMAT4Q9H898 229 aa6.81□□□□□ -1.32
SYNE2-217ENST00000555022 HRNRQ86YZ3 2850 aaPredicted RBP6.81□□□□□ -1.32
SYNE2-217ENST00000555022 TRAV4A0A0B4J268 109 aa6.8□□□□□ -1.32
SYNE2-217ENST00000555022 A8MWV9 139 aa6.8□□□□□ -1.32
SYNE2-217ENST00000555022 ELANEP08246 267 aa6.8□□□□□ -1.32
SYNE2-217ENST00000555022 TEX29Q8N6K0 151 aa6.8□□□□□ -1.32
SYNE2-217ENST00000555022 BAALCQ8WXS3 180 aa6.8□□□□□ -1.32
SYNE2-217ENST00000555022 MSRB2Q9Y3D2 182 aa6.8□□□□□ -1.32
SYNE2-217ENST00000555022 C5orf64Q2M2E5 130 aa6.8□□□□□ -1.32
SYNE2-217ENST00000555022 TP53TG1Q9Y2A0 90 aa6.8□□□□□ -1.32
SYNE2-217ENST00000555022 IGLV2-18A0A075B6J9 118 aa6.8□□□□□ -1.32
SYNE2-217ENST00000555022 CEACAM4O75871 244 aa6.8□□□□□ -1.32
SYNE2-217ENST00000555022 TMEM95Q3KNT9 176 aa6.8□□□□□ -1.32
SYNE2-217ENST00000555022 ZFAND6Q6FIF0 208 aa6.8□□□□□ -1.32
SYNE2-217ENST00000555022 SCGB1A1P11684 91 aa6.79□□□□□ -1.32
SYNE2-217ENST00000555022 PLNP26678 52 aa6.79□□□□□ -1.32
SYNE2-217ENST00000555022 LINC00311Q8N616 119 aa6.79□□□□□ -1.32
SYNE2-217ENST00000555022 PTPRQQ9UMZ3 2332 aa6.79□□□□□ -1.32
SYNE2-217ENST00000555022 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.79□□□□□ -1.32
SYNE2-217ENST00000555022 SUMO2P61956 95 aaKnown RBP6.79□□□□□ -1.32
SYNE2-217ENST00000555022 HERV-K104P63124 156 aa6.79□□□□□ -1.32
SYNE2-217ENST00000555022 SHISA2Q6UWI4 295 aa6.79□□□□□ -1.32
SYNE2-217ENST00000555022 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.79□□□□□ -1.32
SYNE2-217ENST00000555022 LYPD1Q8N2G4 141 aa6.79□□□□□ -1.32
SYNE2-217ENST00000555022 OR11H6Q8NGC7 330 aa6.79□□□□□ -1.32
SYNE2-217ENST00000555022 DPM3Q9P2X0 92 aa6.79□□□□□ -1.32
SYNE2-217ENST00000555022 POLQO75417 2590 aa6.79□□□□□ -1.32
SYNE2-217ENST00000555022 TLN2Q9Y4G6 2542 aa6.79□□□□□ -1.32
SYNE2-217ENST00000555022 IGHV3-73A0A0B4J1V6 119 aa6.78□□□□□ -1.32
SYNE2-217ENST00000555022 TEX49A0A1B0GTD5 131 aa6.78□□□□□ -1.32
SYNE2-217ENST00000555022 RS1O15537 224 aa6.78□□□□□ -1.32
SYNE2-217ENST00000555022 GATD1Q8NB37 220 aa6.78□□□□□ -1.32
SYNE2-217ENST00000555022 PPDPFLQ8WWR9 84 aa6.78□□□□□ -1.32
SYNE2-217ENST00000555022 RAB1BQ9H0U4 201 aa6.78□□□□□ -1.32
SYNE2-217ENST00000555022 UBTD1Q9HAC8 227 aa6.78□□□□□ -1.32
SYNE2-217ENST00000555022 PTPN13Q12923 2485 aa6.78□□□□□ -1.32
SYNE2-217ENST00000555022 IGLV11-55A0A075B6I3 123 aa6.78□□□□□ -1.32
SYNE2-217ENST00000555022 TCTEX1D4Q5JR98 221 aa6.78□□□□□ -1.32
SYNE2-217ENST00000555022 MYO9AB2RTY4 2548 aa6.78□□□□□ -1.32
SYNE2-217ENST00000555022 USP9YO00507 2555 aaPredicted RBP6.78□□□□□ -1.32
SYNE2-217ENST00000555022 TRAV12-3A0A0B4J271 114 aa6.78□□□□□ -1.32
SYNE2-217ENST00000555022 IGHV7-4-1A0A0J9YVY3 117 aa6.78□□□□□ -1.32
SYNE2-217ENST00000555022 CRYBG3Q68DQ2 2970 aa6.78□□□□□ -1.32
SYNE2-217ENST00000555022 A4D1N5 150 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 A8MZ25 164 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 SNCGO76070 127 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 TMEM30BQ3MIR4 351 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 C20orf173Q96LM9 149 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 ZNF292O60281 2723 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 ATP6V0E1O15342 81 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 SLC25A20O43772 301 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 TRBV12-3P01733 135 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 ZNF688P0C7X2 276 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 CFC1BP0CG36 223 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 CFC1P0CG37 223 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 TEN1Q86WV5 123 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 NDUFA11Q86Y39 141 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 DAND5Q8N907 189 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 MUC6Q6W4X9 2439 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 EDN2P20800 178 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 GAGE2BQ13066 116 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 PDE6HQ13956 83 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 GAGE2EQ4V326 116 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 GAGE2DQ9UEU5 116 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 ERG28Q9UKR5 140 aa6.77□□□□□ -1.33
SYNE2-217ENST00000555022 A6NJY4 79 aa6.76□□□□□ -1.33
SYNE2-217ENST00000555022 ZNF672Q499Z4 452 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-217ENST00000555022 FAM159AQ6UWV7 190 aa6.76□□□□□ -1.33
SYNE2-217ENST00000555022 TRBV6-1A0A0K0K1D8 114 aa6.75□□□□□ -1.33
SYNE2-217ENST00000555022 RBAKDNA6NC62 111 aa6.75□□□□□ -1.33
SYNE2-217ENST00000555022 SHISA9B4DS77 424 aa6.75□□□□□ -1.33
SYNE2-217ENST00000555022 LGALS3P17931 250 aaKnown RBP6.75□□□□□ -1.33
SYNE2-217ENST00000555022 LINC01559Q495D7 138 aa6.75□□□□□ -1.33
SYNE2-217ENST00000555022 CEMP1Q6PRD7 247 aaPredicted RBP6.75□□□□□ -1.33
SYNE2-217ENST00000555022 TRAV12-2A0A075B6T6 113 aa6.75□□□□□ -1.33
SYNE2-217ENST00000555022 PF4V1P10720 104 aa6.75□□□□□ -1.33
SYNE2-217ENST00000555022 LY6EQ16553 131 aa6.75□□□□□ -1.33
SYNE2-217ENST00000555022 ASCL5Q7RTU5 278 aa6.75□□□□□ -1.33
SYNE2-217ENST00000555022 NEXN-AS1Q8NBZ9 246 aa6.75□□□□□ -1.33
SYNE2-217ENST00000555022 DUX3Q96PT4 197 aa6.75□□□□□ -1.33
SYNE2-217ENST00000555022 CSMD2Q7Z408 3487 aa6.75□□□□□ -1.33
SYNE2-217ENST00000555022 JMJD1CQ15652 2540 aa6.75□□□□□ -1.33
SYNE2-217ENST00000555022 CLEC2BQ92478 149 aa6.75□□□□□ -1.33
SYNE2-217ENST00000555022 IGHV7-81A0A0B4J1V7 117 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 A0A0J9YY99 117 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 CLPSL1A2RUU4 121 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 BUB3O43684 328 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 PRM2P04554 102 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 CD3EP07766 207 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 HERVK_113P61574 105 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 C15orf53Q8NAA6 179 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 NUP37Q8NFH4 326 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 ZNF625Q96I27 306 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms