RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 MED14OSP0DP75 135 aa7.28□□□□□ -1.24
SYNE2-215ENST00000554997 FAM222AQ5U5X8 452 aa7.28□□□□□ -1.24
SYNE2-215ENST00000554997 RASL10AQ92737 203 aa7.28□□□□□ -1.24
SYNE2-215ENST00000554997 ANAPC16Q96DE5 110 aa7.28□□□□□ -1.24
SYNE2-215ENST00000554997 V9GYV3 84 aa7.28□□□□□ -1.24
SYNE2-215ENST00000554997 SNAI2O43623 268 aa7.27□□□□□ -1.25
SYNE2-215ENST00000554997 OR5AL1P0C617 328 aa7.27□□□□□ -1.25
SYNE2-215ENST00000554997 IGLC6P0CF74 106 aa7.27□□□□□ -1.25
SYNE2-215ENST00000554997 GZMBP10144 247 aa7.27□□□□□ -1.25
SYNE2-215ENST00000554997 PIK3CD-AS1Q5SR53 167 aa7.27□□□□□ -1.25
SYNE2-215ENST00000554997 WDR73Q6P4I2 378 aa7.27□□□□□ -1.25
SYNE2-215ENST00000554997 LINC00612Q8N6U2 182 aa7.27□□□□□ -1.25
SYNE2-215ENST00000554997 C11orf45Q8TAV5 145 aa7.27□□□□□ -1.25
SYNE2-215ENST00000554997 TSKUQ8WUA8 353 aa7.27□□□□□ -1.25
SYNE2-215ENST00000554997 NDUFAF3Q9BU61 184 aa7.27□□□□□ -1.25
SYNE2-215ENST00000554997 GFRA4Q9GZZ7 299 aa7.27□□□□□ -1.25
SYNE2-215ENST00000554997 H3BVH4 76 aa7.26□□□□□ -1.25
SYNE2-215ENST00000554997 C12orf74Q32Q52 190 aa7.26□□□□□ -1.25
SYNE2-215ENST00000554997 RNF212Q495C1 297 aa7.26□□□□□ -1.25
SYNE2-215ENST00000554997 ZNF876PQ49A33 203 aa7.26□□□□□ -1.25
SYNE2-215ENST00000554997 FER1L6-AS1Q8NA97 138 aa7.26□□□□□ -1.25
SYNE2-215ENST00000554997 GTSF1Q8WW33 167 aa7.26□□□□□ -1.25
SYNE2-215ENST00000554997 C18orf15Q96N68 181 aa7.26□□□□□ -1.25
SYNE2-215ENST00000554997 CELA1Q9UNI1 258 aa7.26□□□□□ -1.25
SYNE2-215ENST00000554997 PHLDA3Q9Y5J5 127 aa7.26□□□□□ -1.25
SYNE2-215ENST00000554997 TENM3Q9P273 2699 aa7.25□□□□□ -1.25
SYNE2-215ENST00000554997 IGHV4-4A0A075B6R2 117 aa7.25□□□□□ -1.25
SYNE2-215ENST00000554997 TRGV1A0A0A0MS02 117 aa7.25□□□□□ -1.25
SYNE2-215ENST00000554997 APOC3P02656 99 aa7.25□□□□□ -1.25
SYNE2-215ENST00000554997 DEFB130BP0DP73 79 aa7.25□□□□□ -1.25
SYNE2-215ENST00000554997 DEFB130AP0DP74 79 aa7.25□□□□□ -1.25
SYNE2-215ENST00000554997 DAD1P61803 113 aa7.25□□□□□ -1.25
SYNE2-215ENST00000554997 LYZL1Q6UWQ5 148 aa7.25□□□□□ -1.25
SYNE2-215ENST00000554997 Q6ZTI0 123 aa7.25□□□□□ -1.25
SYNE2-215ENST00000554997 SVBPQ8N300 66 aa7.25□□□□□ -1.25
SYNE2-215ENST00000554997 SYT8Q8NBV8 401 aa7.25□□□□□ -1.25
SYNE2-215ENST00000554997 CLRN3Q8NCR9 226 aa7.25□□□□□ -1.25
SYNE2-215ENST00000554997 CTDSP1Q9GZU7 261 aa7.25□□□□□ -1.25
SYNE2-215ENST00000554997 TMEM242Q9NWH2 141 aa7.25□□□□□ -1.25
SYNE2-215ENST00000554997 SMIM27A0A1W2PRY6 76 aa7.24□□□□□ -1.25
SYNE2-215ENST00000554997 GAGE12BA1L429 117 aa7.24□□□□□ -1.25
SYNE2-215ENST00000554997 C7orf77A4D0Y5 90 aa7.24□□□□□ -1.25
SYNE2-215ENST00000554997 GAGE7O76087 117 aa7.24□□□□□ -1.25
SYNE2-215ENST00000554997 GAGE12FP0CL80 117 aa7.24□□□□□ -1.25
SYNE2-215ENST00000554997 GAGE12GP0CL81 117 aa7.24□□□□□ -1.25
SYNE2-215ENST00000554997 GAGE12IP0CL82 117 aa7.24□□□□□ -1.25
SYNE2-215ENST00000554997 CACNG7P62955 275 aa7.24□□□□□ -1.25
SYNE2-215ENST00000554997 ZFP82Q8N141 532 aa7.24□□□□□ -1.25
SYNE2-215ENST00000554997 TPPP3Q9BW30 176 aa7.24□□□□□ -1.25
SYNE2-215ENST00000554997 MRPL16Q9NX20 251 aaKnown RBP7.24□□□□□ -1.25
SYNE2-215ENST00000554997 NAT8BQ9UHF3 227 aa7.24□□□□□ -1.25
SYNE2-215ENST00000554997 TRGV2A0A075B6R0 118 aa7.23□□□□□ -1.25
SYNE2-215ENST00000554997 A0A087WWC5 75 aa7.23□□□□□ -1.25
SYNE2-215ENST00000554997 M0R381 172 aa7.23□□□□□ -1.25
SYNE2-215ENST00000554997 CIDEAO60543 219 aa7.23□□□□□ -1.25
SYNE2-215ENST00000554997 NXPH4O95158 308 aa7.23□□□□□ -1.25
SYNE2-215ENST00000554997 SNAPINO95295 136 aa7.23□□□□□ -1.25
SYNE2-215ENST00000554997 NTF3P20783 257 aa7.23□□□□□ -1.25
SYNE2-215ENST00000554997 NANOS2P60321 138 aaKnown RBP7.23□□□□□ -1.25
SYNE2-215ENST00000554997 RHEBQ15382 184 aa7.23□□□□□ -1.25
SYNE2-215ENST00000554997 SPANXN1Q5VSR9 72 aa7.23□□□□□ -1.25
SYNE2-215ENST00000554997 OR10AG1Q8NH19 301 aa7.23□□□□□ -1.25
SYNE2-215ENST00000554997 PGLYRP4Q96LB8 373 aa7.23□□□□□ -1.25
SYNE2-215ENST00000554997 IMMP2LQ96T52 175 aa7.23□□□□□ -1.25
SYNE2-215ENST00000554997 CNFNQ9BYD5 112 aa7.23□□□□□ -1.25
SYNE2-215ENST00000554997 HUWE1Q7Z6Z7 4374 aaKnown RBP7.23□□□□□ -1.25
SYNE2-215ENST00000554997 MUC21A0A0G2JKD1 596 aa7.22□□□□□ -1.25
SYNE2-215ENST00000554997 MUC21A0A140T8X8 626 aa7.22□□□□□ -1.25
SYNE2-215ENST00000554997 HIGD1CA8MV81 97 aa7.22□□□□□ -1.25
SYNE2-215ENST00000554997 A8MWV9 139 aa7.22□□□□□ -1.25
SYNE2-215ENST00000554997 RS1O15537 224 aa7.22□□□□□ -1.25
SYNE2-215ENST00000554997 CTRLP40313 264 aa7.22□□□□□ -1.25
SYNE2-215ENST00000554997 CFAP126Q5VTH2 177 aa7.22□□□□□ -1.25
SYNE2-215ENST00000554997 POM121L12Q8N7R1 296 aa7.22□□□□□ -1.25
SYNE2-215ENST00000554997 NUP35Q8NFH5 326 aa7.22□□□□□ -1.25
SYNE2-215ENST00000554997 OR4C5Q8NGB2 326 aa7.22□□□□□ -1.25
SYNE2-215ENST00000554997 RPS10P5Q9NQ39 176 aa7.22□□□□□ -1.25
SYNE2-215ENST00000554997 TRAV4A0A0B4J268 109 aa7.21□□□□□ -1.26
SYNE2-215ENST00000554997 ATP5G1P05496 136 aa7.21□□□□□ -1.26
SYNE2-215ENST00000554997 SSTP61278 116 aa7.21□□□□□ -1.26
SYNE2-215ENST00000554997 TWIST1Q15672 202 aa7.21□□□□□ -1.26
SYNE2-215ENST00000554997 Q6ZTC4 211 aa7.21□□□□□ -1.26
SYNE2-215ENST00000554997 BORCS7Q96B45 105 aa7.21□□□□□ -1.26
SYNE2-215ENST00000554997 WWC2-AS2Q96NR7 200 aa7.21□□□□□ -1.26
SYNE2-215ENST00000554997 MSRB1Q9NZV6 116 aa7.21□□□□□ -1.26
SYNE2-215ENST00000554997 A0A1B0GUT8 65 aa7.2□□□□□ -1.26
SYNE2-215ENST00000554997 CRYGDP07320 174 aa7.2□□□□□ -1.26
SYNE2-215ENST00000554997 FAM3BP58499 235 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-215ENST00000554997 RIGQ13278 110 aa7.2□□□□□ -1.26
SYNE2-215ENST00000554997 ZFP2Q6ZN57 461 aa7.2□□□□□ -1.26
SYNE2-215ENST00000554997 ZNF479Q96JC4 524 aa7.2□□□□□ -1.26
SYNE2-215ENST00000554997 JPT2Q9H910 190 aa7.2□□□□□ -1.26
SYNE2-215ENST00000554997 STAB2Q8WWQ8 2551 aa7.2□□□□□ -1.26
SYNE2-215ENST00000554997 DEFB131BA0A096LNP1 70 aa7.19□□□□□ -1.26
SYNE2-215ENST00000554997 TRAV10A0A0B4J240 114 aa7.19□□□□□ -1.26
SYNE2-215ENST00000554997 A0A1B0GW15 77 aa7.19□□□□□ -1.26
SYNE2-215ENST00000554997 SLAQ13239 276 aa7.19□□□□□ -1.26
SYNE2-215ENST00000554997 FHL2Q14192 279 aa7.19□□□□□ -1.26
SYNE2-215ENST00000554997 UFSP1Q6NVU6 142 aa7.19□□□□□ -1.26
SYNE2-215ENST00000554997 PHLDA1Q8WV24 401 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms