RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 GTSCR1Q86UQ5 136 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 NEXN-AS1Q8NBZ9 246 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 FLVCR1-AS1Q8TAF5 88 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 C11orf45Q8TAV5 145 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 BRK1Q8WUW1 75 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 LIME1Q9H400 295 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 FAM60AQ9NP50 221 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 IL36RNQ9UBH0 155 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 C19orf25Q9UFG5 118 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-227ENST00000554491 AMMECR1Q9Y4X0 333 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-227ENST00000554491 TIMM9Q9Y5J7 89 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 F11RQ9Y624 299 aaKnown RBP3.37□□□□□ -1.87
ATXN3-227ENST00000554491 SEC16AO15027 2179 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 NCKAP5O14513 1909 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 SVEP1Q4LDE5 3571 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 TRAV8-1A0A0A6YYK1 113 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 PIGBOS1A0A0B4J2F0 54 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 TCRBV4S1A1TA0A5B7 111 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 hADV29S1A0JD25 119 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 LYRM9A8MSI8 78 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 C9JCJ5 164 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 H0YGG7 62 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 TIMM23O14925 209 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 NPYP01303 97 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 IL4P05112 153 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 FXYD2P54710 66 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 UBE2L3P68036 154 aaKnown RBP3.36□□□□□ -1.87
ATXN3-227ENST00000554491 RSPO1Q2MKA7 263 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-227ENST00000554491 DEFB113Q30KQ7 82 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 DEFB134Q4QY38 66 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 TMEM170BQ5T4T1 132 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 LGALS9CQ6DKI2 356 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 LCN10Q6JVE6 187 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 KCTD18Q6PI47 426 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-227ENST00000554491 C16orf47Q6ZP98 133 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-227ENST00000554491 LINC00305Q7Z4B0 112 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 PCP2Q8IVA1 136 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 TMEM252Q8N6L7 170 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 PFN4Q8NHR9 129 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 NMNAT3Q96T66 252 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 DSCR8Q96T75 97 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 SLC25A2Q9BXI2 301 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 PRRG4Q9BZD6 226 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 NHP2Q9NX24 153 aaKnown RBP3.36□□□□□ -1.87
ATXN3-227ENST00000554491 HHLA3Q9XRX5 114 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 LSM4Q9Y4Z0 139 aaKnown RBP3.36□□□□□ -1.87
ATXN3-227ENST00000554491 ARID1AO14497 2285 aa3.36□□□□□ -1.87
ATXN3-227ENST00000554491 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.36□□□□□ -1.874e-12■■■□□ 18.3
ATXN3-227ENST00000554491 NUP214P35658 2090 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-227ENST00000554491 MYMXA0A1B0GTQ4 84 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 CTXND1A0A1B0GTU2 59 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 A0A1W2PQD3 144 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 K7EMT4 169 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 LGALS9O00182 355 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 SCRG1O75711 98 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 IGLV2-11P01706 119 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 GCHFRP30047 84 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 APOC4P55056 127 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 UBE2D3P61077 147 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 ERVK-16P61578 105 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 UBE2D2P62837 147 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 TFF3Q07654 80 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 SRSF9Q13242 221 aaKnown RBP eCLIP3.35□□□□□ -1.87
ATXN3-227ENST00000554491 ZNF726P1Q15940 193 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 LINC01590Q5TEZ4 76 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 C5orf38Q86SI9 138 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 LINC00643Q86TS7 51 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 SERP2Q8N6R1 65 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 OR5C1Q8NGR4 320 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 SSMEM1Q8WWF3 244 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 C4orf45Q96LM5 186 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 CHAC1Q9BUX1 264 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 NXT2Q9NPJ8 142 aaKnown RBP3.35□□□□□ -1.87
ATXN3-227ENST00000554491 OSTCQ9NRP0 149 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 TP73-AS1Q9UF72 201 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 PHF3Q92576 2039 aaKnown RBP3.35□□□□□ -1.87
ATXN3-227ENST00000554491 DYSFO75923 2080 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 RYR3Q15413 4870 aa3.35□□□□□ -1.87
ATXN3-227ENST00000554491 KMT2CQ8NEZ4 4911 aaKnown RBP3.34□□□□□ -1.87
ATXN3-227ENST00000554491 IGHV1-58A0A0C4DH39 117 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 PLAC8L1A1L4L8 177 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 CRYM-AS1A6NIL9 109 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 C15orf62A8K5M9 175 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 MRPS12O15235 138 aaKnown RBP3.34□□□□□ -1.87
ATXN3-227ENST00000554491 SYNGR2O43760 224 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 PPYP01298 95 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 CCL1P22362 96 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 CA6P23280 308 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 PSMB2P49721 201 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 DYNLT3P51808 116 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 HIST1H4AP62805 103 aaKnown RBP3.34□□□□□ -1.87
ATXN3-227ENST00000554491 ERCC8Q13216 396 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 DEFB121Q5J5C9 76 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 C1orf140Q5VVS0 124 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 PDPNQ86YL7 162 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 RFESDQ8TAC1 157 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 C10orf105Q8TEF2 133 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 EEF1AKMT3Q96AZ1 226 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms