RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 MAP1AP78559 2803 aaPredicted RBP1.95□□□□□ -2.1
PRPF39-207ENST00000554439 RIF1Q5UIP0 2472 aaKnown RBP1.95□□□□□ -2.1
PRPF39-207ENST00000554439 TTC28Q96AY4 2481 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 TRBV7-3A0A075B6L6 115 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 A0A1B0GV72 72 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 LINC01546A6NGU7 62 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 NDUFS8O00217 210 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 APOMO95445 188 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 TGFAP01135 160 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 MT-ATP8P03928 68 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 CRYBA4P53673 196 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 GAGE2BQ13066 116 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 HES1Q14469 280 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 RRN3P1Q2M238 152 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 GAGE2EQ4V326 116 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 GAGE2AQ6NT46 116 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 MORN3Q6PF18 240 aaPredicted RBP1.95□□□□□ -2.1
PRPF39-207ENST00000554439 NRACQ8N912 160 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 PIFOQ8TCI5 191 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 ZNF418Q8TF45 676 aaPredicted RBP1.95□□□□□ -2.1
PRPF39-207ENST00000554439 RNASE6Q93091 150 aaKnown RBP1.95□□□□□ -2.1
PRPF39-207ENST00000554439 DYNLRB1Q9NP97 96 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 NXT2Q9NPJ8 142 aaKnown RBP1.95□□□□□ -2.1
PRPF39-207ENST00000554439 GAGE2DQ9UEU5 116 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 OTOGLQ3ZCN5 2332 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 A0A087WX48 190 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 NCBP2LA6PVI3 153 aaKnown RBP1.95□□□□□ -2.1
PRPF39-207ENST00000554439 FABP5P3A8MUU1 101 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 E7EQL1 145 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 LY6LH3BQJ8 138 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 IGF1P05019 195 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 SCGB1A1P11684 91 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 HLA-DRB4P13762 266 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 BMI1P35226 326 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 EMP1P54849 157 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 PDE6HQ13956 83 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 PAPPA-AS1Q5QFB9 102 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 Q75L30 129 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 TTC9CQ8N5M4 171 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 Q8N8P6 123 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 KLHL30-AS1Q8NEE0 82 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 MYOZ3Q8TDC0 251 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 PLEKHB2Q96CS7 222 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 RALYQ9UKM9 306 aaKnown RBP1.95□□□□□ -2.1
PRPF39-207ENST00000554439 HLA-DRB4X5D2U9 266 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 IGLV11-55A0A075B6I3 123 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 LOC107984156A0A0G2JMH3 177 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 IGHV7-4-1A0A0J9YVY3 117 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 MYMXA0A1B0GTQ4 84 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 LINC01549A6NIU2 74 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 SHISA9B4DS77 424 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 NBR2O15453 112 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 ATP5LO75964 103 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 CTSGP08311 255 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 LGALS1P09382 135 aaKnown RBP1.94□□□□□ -2.1
PRPF39-207ENST00000554439 PSMB2P49721 201 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 XGP55808 180 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 DEFB1P60022 68 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 LAGE3Q14657 143 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 ASCL5Q7RTU5 278 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 COX8CQ7Z4L0 72 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 ARL17AQ8IVW1 177 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 DEFB124Q8NES8 71 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 RPL39LQ96EH5 51 aaKnown RBP1.94□□□□□ -2.1
PRPF39-207ENST00000554439 KIR2DL4Q99706 377 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 CNFNQ9BYD5 112 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 PRO3102Q9H379 93 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 GEMIN7Q9H840 131 aaKnown RBP1.94□□□□□ -2.1
PRPF39-207ENST00000554439 MRPL16Q9NX20 251 aaKnown RBP1.94□□□□□ -2.1
PRPF39-207ENST00000554439 C21orf62Q9NYP8 219 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 KAAG1Q9UBP8 84 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 TLN1Q9Y490 2541 aaKnown RBP1.94□□□□□ -2.1
PRPF39-207ENST00000554439 ANKHD1Q8IWZ3 2542 aaKnown RBP1.94□□□□□ -2.1
PRPF39-207ENST00000554439 H3BVH4 76 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 J3QR89 54 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 TSPAN13O95857 204 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 SPINK8P0C7L1 97 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 RPL7P18124 248 aaKnown RBP1.94□□□□□ -2.1
PRPF39-207ENST00000554439 PROK1P58294 105 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 SRSF1Q07955 248 aaKnown RBP eCLIP1.94□□□□□ -2.1
PRPF39-207ENST00000554439 SCGB2A2Q13296 93 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 C5orf64Q2M2E5 130 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 ODF3L2Q3SX64 289 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 PRR9Q5T870 116 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 SPANXN1Q5VSR9 72 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 CFAP126Q5VTH2 177 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 Q6ZSV7 163 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 ZNF502Q8TBZ5 544 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 CARD19Q96LW7 228 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 C1QTNF4Q9BXJ3 329 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 AGPAT4-IT1Q9H0P7 198 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 SPTA1P02549 2419 aa1.94□□□□□ -2.1
PRPF39-207ENST00000554439 MUC4Q99102 2169 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 PTPRZ1P23471 2315 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-207ENST00000554439 ZNF815PA8K554 130 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 OR11H12B2RN74 326 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 F8VRH5 84 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 H7C1H1 209 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 M0R381 172 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms