RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 UBA52P62987 128 aaKnown RBP2.18□□□□□ -2.06
SCFD1-211ENST00000554437 RBM3P98179 157 aaKnown RBP2.18□□□□□ -2.06
SCFD1-211ENST00000554437 INSL4Q14641 139 aa2.18□□□□□ -2.06
SCFD1-211ENST00000554437 TXNDC17Q9BRA2 123 aa2.18□□□□□ -2.06
SCFD1-211ENST00000554437 DPY30Q9C005 99 aa2.18□□□□□ -2.06
SCFD1-211ENST00000554437 AP4S1Q9Y587 144 aa2.18□□□□□ -2.06
SCFD1-211ENST00000554437 LAMB4A4D0S4 1761 aa2.18□□□□□ -2.06
SCFD1-211ENST00000554437 DAPK1P53355 1430 aa2.17□□□□□ -2.06
SCFD1-211ENST00000554437 NSD3Q9BZ95 1437 aa2.17□□□□□ -2.06
SCFD1-211ENST00000554437 ADGRB3O60242 1522 aa2.17□□□□□ -2.06
SCFD1-211ENST00000554437 COL4A2P08572 1712 aa2.17□□□□□ -2.06
SCFD1-211ENST00000554437 KIAA2026Q5HYC2 2103 aa2.17□□□□□ -2.06
SCFD1-211ENST00000554437 IGKCP01834 107 aa2.17□□□□□ -2.06
SCFD1-211ENST00000554437 DCDP81605 110 aaKnown RBP2.17□□□□□ -2.06
SCFD1-211ENST00000554437 C9orf116Q5BN46 136 aaPredicted RBP2.17□□□□□ -2.06
SCFD1-211ENST00000554437 C10orf55Q5SWW7 151 aa2.17□□□□□ -2.06
SCFD1-211ENST00000554437 C5orf38Q86SI9 138 aa2.17□□□□□ -2.06
SCFD1-211ENST00000554437 TMEM106BQ9NUM4 274 aa2.17□□□□□ -2.06
SCFD1-211ENST00000554437 COL11A1P12107 1806 aaPredicted RBP2.17□□□□□ -2.06
SCFD1-211ENST00000554437 ADAMTS7Q9UKP4 1686 aa2.16□□□□□ -2.06
SCFD1-211ENST00000554437 UBE2L5PA0A1B0GUS4 154 aa2.16□□□□□ -2.06
SCFD1-211ENST00000554437 J3QRE1 110 aa2.16□□□□□ -2.06
SCFD1-211ENST00000554437 LINC00032P0C843 101 aa2.16□□□□□ -2.06
SCFD1-211ENST00000554437 ATP5EP56381 51 aaPredicted RBP2.16□□□□□ -2.06
SCFD1-211ENST00000554437 UBE2L3P68036 154 aaKnown RBP2.16□□□□□ -2.06
SCFD1-211ENST00000554437 IQCJQ1A5X6 159 aa2.16□□□□□ -2.06
SCFD1-211ENST00000554437 LYPD5Q6UWN5 251 aa2.16□□□□□ -2.06
SCFD1-211ENST00000554437 LINC00299Q6ZSB3 139 aa2.16□□□□□ -2.06
SCFD1-211ENST00000554437 SBSPONQ8IVN8 264 aa2.16□□□□□ -2.06
SCFD1-211ENST00000554437 C9orf62Q8N4C0 152 aa2.16□□□□□ -2.06
SCFD1-211ENST00000554437 DPH3P1Q9H4G8 78 aa2.16□□□□□ -2.06
SCFD1-211ENST00000554437 KLK9Q9UKQ9 250 aa2.16□□□□□ -2.06
SCFD1-211ENST00000554437 BCORL1Q5H9F3 1711 aa2.16□□□□□ -2.06
SCFD1-211ENST00000554437 COL4A5P29400 1685 aa2.15□□□□□ -2.06
SCFD1-211ENST00000554437 TRIOBPQ9H2D6 2365 aa2.15□□□□□ -2.06
SCFD1-211ENST00000554437 TRBV6-4A0A1B0GX49 114 aa2.15□□□□□ -2.07
SCFD1-211ENST00000554437 SSSCA1O60232 199 aa2.15□□□□□ -2.07
SCFD1-211ENST00000554437 RNASE3P12724 160 aaKnown RBP2.15□□□□□ -2.07
SCFD1-211ENST00000554437 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
SCFD1-211ENST00000554437 CSAG1Q6PB30 78 aa2.15□□□□□ -2.07
SCFD1-211ENST00000554437 COA5Q86WW8 74 aa2.15□□□□□ -2.07
SCFD1-211ENST00000554437 LRP5O75197 1615 aa2.15□□□□□ -2.07
SCFD1-211ENST00000554437 MYH9P35579 1960 aaKnown RBP2.15□□□□□ -2.07
SCFD1-211ENST00000554437 TROQ12816 1431 aaPredicted RBP2.15□□□□□ -2.07
SCFD1-211ENST00000554437 PPIP5K1Q6PFW1 1433 aa2.15□□□□□ -2.07
SCFD1-211ENST00000554437 A0A0J9YY99 117 aa2.14□□□□□ -2.07
SCFD1-211ENST00000554437 CXorf51AA0A1B0GTR3 108 aa2.14□□□□□ -2.07
SCFD1-211ENST00000554437 H3BQ15 152 aa2.14□□□□□ -2.07
SCFD1-211ENST00000554437 NUPR1O60356 82 aa2.14□□□□□ -2.07
SCFD1-211ENST00000554437 SNCAP37840 140 aa2.14□□□□□ -2.07
SCFD1-211ENST00000554437 SPTSSBQ8NFR3 76 aa2.14□□□□□ -2.07
SCFD1-211ENST00000554437 VAMP8Q9BV40 100 aa2.14□□□□□ -2.07
SCFD1-211ENST00000554437 ATG5Q9H1Y0 275 aa2.14□□□□□ -2.07
SCFD1-211ENST00000554437 CDC42SE1Q9NRR8 79 aa2.14□□□□□ -2.07
SCFD1-211ENST00000554437 SCP2D1Q9UJQ7 156 aa2.14□□□□□ -2.07
SCFD1-211ENST00000554437 CPSF1Q10570 1443 aaKnown RBP2.14□□□□□ -2.07
SCFD1-211ENST00000554437 TEX14Q8IWB6 1497 aa2.14□□□□□ -2.07
SCFD1-211ENST00000554437 ALPK3Q96L96 1907 aa2.13□□□□□ -2.07
SCFD1-211ENST00000554437 AKAP11Q9UKA4 1901 aa2.13□□□□□ -2.07
SCFD1-211ENST00000554437 TRBV10-1A0A0K0K1A3 114 aa2.13□□□□□ -2.07
SCFD1-211ENST00000554437 RBAKDNA6NC62 111 aa2.13□□□□□ -2.07
SCFD1-211ENST00000554437 TFF1P04155 84 aa2.13□□□□□ -2.07
SCFD1-211ENST00000554437 COMMD6Q7Z4G1 85 aa2.13□□□□□ -2.07
SCFD1-211ENST00000554437 NDUFA11Q86Y39 141 aa2.13□□□□□ -2.07
SCFD1-211ENST00000554437 C4orf33Q8N1A6 199 aa2.13□□□□□ -2.07
SCFD1-211ENST00000554437 DMAC1Q96GE9 116 aa2.13□□□□□ -2.07
SCFD1-211ENST00000554437 REG4Q9BYZ8 158 aa2.13□□□□□ -2.07
SCFD1-211ENST00000554437 FAIMQ9NVQ4 179 aa2.13□□□□□ -2.07
SCFD1-211ENST00000554437 MRPL36Q9P0J6 103 aaKnown RBP2.13□□□□□ -2.07
SCFD1-211ENST00000554437 C22orf24Q9Y442 160 aa2.13□□□□□ -2.07
SCFD1-211ENST00000554437 ADGRL2O95490 1459 aa2.13□□□□□ -2.07
SCFD1-211ENST00000554437 IFT140Q96RY7 1462 aa2.13□□□□□ -2.07
SCFD1-211ENST00000554437 LAMB2P55268 1798 aa2.13□□□□□ -2.07
SCFD1-211ENST00000554437 AKAP12Q02952 1782 aa2.13□□□□□ -2.07
SCFD1-211ENST00000554437 CASZ1Q86V15 1759 aa2.13□□□□□ -2.07
SCFD1-211ENST00000554437 KIAA1549LQ6ZVL6 1849 aa2.12□□□□□ -2.07
SCFD1-211ENST00000554437 SCN3AQ9NY46 2000 aa2.12□□□□□ -2.07
SCFD1-211ENST00000554437 C10orf71Q711Q0 1435 aa2.12□□□□□ -2.07
SCFD1-211ENST00000554437 TRBV6-5A0A0K0K1A5 114 aa2.12□□□□□ -2.07
SCFD1-211ENST00000554437 TRBV10-3A0A0K0K1G6 114 aa2.12□□□□□ -2.07
SCFD1-211ENST00000554437 NUPR2A6NF83 97 aa2.12□□□□□ -2.07
SCFD1-211ENST00000554437 PPYP01298 95 aa2.12□□□□□ -2.07
SCFD1-211ENST00000554437 MT-ATP8P03928 68 aa2.12□□□□□ -2.07
SCFD1-211ENST00000554437 LIMD2Q9BT23 127 aa2.12□□□□□ -2.07
SCFD1-211ENST00000554437 MRPL35Q9NZE8 188 aaKnown RBP2.12□□□□□ -2.07
SCFD1-211ENST00000554437 PCNX2A6NKB5 2137 aa2.12□□□□□ -2.07
SCFD1-211ENST00000554437 KIAA1549Q9HCM3 1950 aa2.12□□□□□ -2.07
SCFD1-211ENST00000554437 JMJD7-PLA2G4BH0Y9G9 81 aa2.11□□□□□ -2.07
SCFD1-211ENST00000554437 IFI27L1Q96BM0 104 aa2.11□□□□□ -2.07
SCFD1-211ENST00000554437 LINC00312Q9Y6C7 94 aa2.11□□□□□ -2.07
SCFD1-211ENST00000554437 PTPRMP28827 1452 aa2.11□□□□□ -2.07
SCFD1-211ENST00000554437 HEATR5BQ9P2D3 2071 aa2.11□□□□□ -2.07
SCFD1-211ENST00000554437 ARHGAP5Q13017 1502 aa2.11□□□□□ -2.07
SCFD1-211ENST00000554437 SPHKAPQ2M3C7 1700 aa2.11□□□□□ -2.07
SCFD1-211ENST00000554437 RBBP6Q7Z6E9 1792 aaKnown RBP2.1□□□□□ -2.07
SCFD1-211ENST00000554437 ZFHX2Q9C0A1 2572 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-211ENST00000554437 FYCO1Q9BQS8 1478 aa2.1□□□□□ -2.07
SCFD1-211ENST00000554437 TRAV13-2A0A0B4J235 113 aa2.1□□□□□ -2.07
SCFD1-211ENST00000554437 TRAV12-3A0A0B4J271 114 aa2.1□□□□□ -2.07
SCFD1-211ENST00000554437 IGHV3-30P01768 117 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms