RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 SPXQ9BT56 116 aa4.53□□□□□ -1.68
SLIRP-203ENST00000554074 MRPL16Q9NX20 251 aaKnown RBP4.53□□□□□ -1.68
SLIRP-203ENST00000554074 GNG13Q9P2W3 67 aa4.53□□□□□ -1.68
SLIRP-203ENST00000554074 HHLA3Q9XRX5 114 aa4.53□□□□□ -1.68
SLIRP-203ENST00000554074 TRAV21A0A0B4J279 112 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 RBFOX3A6NFN3 312 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 TMEM250H0YL14 139 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 EIF3GO75821 320 aaKnown RBP eCLIP4.52□□□□□ -1.693e-6■□□□□ 9.7
SLIRP-203ENST00000554074 NXPH4O95158 308 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 IGLV2-11P01706 119 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 ORM1P02763 201 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 AKR1C3P42330 323 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 LINC00315P59091 139 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 UBE2G1P62253 170 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 CCL20P78556 96 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 ZNF506Q5JVG8 444 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 LYPD5Q6UWN5 251 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 FAM159AQ6UWV7 190 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 Q6ZQT7 251 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 NEGR1Q7Z3B1 354 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 C8orf49Q96NF6 230 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 TREM1Q9NP99 234 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 BIN3Q9NQY0 253 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 MDFICQ9P1T7 246 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 PSG8Q9UQ74 426 aa4.52□□□□□ -1.69
SLIRP-203ENST00000554074 TRAV9-2A0A087WT02 112 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 TRAV4A0A0B4J268 109 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 TRGV4A0A0C4DH28 118 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 K7EQD1 137 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 LTAP01374 205 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 IGHV3-53P01767 116 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 SRIP30626 198 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 TIRAPP58753 221 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 KRTAP10-2P60368 255 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 GNG5P63218 68 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 SMUG1Q53HV7 270 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 MUC21Q5SSG8 566 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 CDPF1Q6NVV7 123 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 SH2D6Q7Z4S9 175 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 NFE4Q86UQ8 179 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 TMEM183AQ8IXX5 376 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 Q8N1X5 172 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 MAPKAPK5-AS1Q8N8E1 139 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 KCNS1Q96KK3 526 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 FAM210AQ96ND0 272 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 PGPEP1Q9NXJ5 209 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 RPH3ALQ9UNE2 315 aa4.51□□□□□ -1.69
SLIRP-203ENST00000554074 IGHV3-16A0A0C4DH30 117 aa4.5□□□□□ -1.69
SLIRP-203ENST00000554074 A0A1B0GV50 99 aa4.5□□□□□ -1.69
SLIRP-203ENST00000554074 FABP5P3A8MUU1 101 aa4.5□□□□□ -1.69
SLIRP-203ENST00000554074 C9JCJ5 164 aa4.5□□□□□ -1.69
SLIRP-203ENST00000554074 M0R2P5 195 aa4.5□□□□□ -1.69
SLIRP-203ENST00000554074 EREGO14944 169 aa4.5□□□□□ -1.69
SLIRP-203ENST00000554074 CIDEAO60543 219 aa4.5□□□□□ -1.69
SLIRP-203ENST00000554074 PFN1P07737 140 aaKnown RBP4.5□□□□□ -1.69
SLIRP-203ENST00000554074 DNAH10OSP0CZ25 163 aa4.5□□□□□ -1.69
SLIRP-203ENST00000554074 ERVFC1-1P60608 527 aa4.5□□□□□ -1.69
SLIRP-203ENST00000554074 PEA15Q15121 130 aa4.5□□□□□ -1.69
SLIRP-203ENST00000554074 CLLU1Q5K131 121 aa4.5□□□□□ -1.69
SLIRP-203ENST00000554074 PRNTQ86SH4 94 aa4.5□□□□□ -1.69
SLIRP-203ENST00000554074 Q86TA4 180 aa4.5□□□□□ -1.69
SLIRP-203ENST00000554074 PCNPQ8WW12 178 aaKnown RBP4.5□□□□□ -1.69
SLIRP-203ENST00000554074 ZNF479Q96JC4 524 aa4.5□□□□□ -1.69
SLIRP-203ENST00000554074 LY96Q9Y6Y9 160 aa4.5□□□□□ -1.69
SLIRP-203ENST00000554074 HERC1Q15751 4861 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 TRAV8-1A0A0A6YYK1 113 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 SCO2A0A1W2PP80 73 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 RAB19A4D1S5 217 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 SFTA3P0C7M3 94 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 GYPEP15421 78 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 EVI2AP22794 236 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 RPL35P42766 123 aaKnown RBP4.49□□□□□ -1.69
SLIRP-203ENST00000554074 ZNF674Q2M3X9 581 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 FAM74A3Q4VXF1 159 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 FAM162BQ5T6X4 162 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 BAGE2Q86Y30 109 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 C10orf126Q8N4M7 172 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 OR4C5Q8NGB2 326 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 PTH2Q96A98 100 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 TVP23CQ96ET8 276 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 MLST8Q9BVC4 326 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 EIF5A2Q9GZV4 153 aaKnown RBP4.49□□□□□ -1.69
SLIRP-203ENST00000554074 SDF2L1Q9HCN8 221 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 MED9Q9NWA0 146 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 LRP1BQ9NZR2 4599 aa4.49□□□□□ -1.69
SLIRP-203ENST00000554074 TRAV34A0A0B4J273 112 aa4.48□□□□□ -1.69
SLIRP-203ENST00000554074 GNRH2O43555 120 aa4.48□□□□□ -1.69
SLIRP-203ENST00000554074 GCGP01275 180 aa4.48□□□□□ -1.69
SLIRP-203ENST00000554074 TYMSP04818 313 aa4.48□□□□□ -1.69
SLIRP-203ENST00000554074 CXCL1P09341 107 aa4.48□□□□□ -1.69
SLIRP-203ENST00000554074 GATA1P15976 413 aaPredicted RBP4.48□□□□□ -1.69
SLIRP-203ENST00000554074 GNG4P50150 75 aa4.48□□□□□ -1.69
SLIRP-203ENST00000554074 PIK3CD-AS1Q5SR53 167 aa4.48□□□□□ -1.69
SLIRP-203ENST00000554074 DNLZQ5SXM8 178 aa4.48□□□□□ -1.69
SLIRP-203ENST00000554074 WFDC10BQ8IUB3 73 aa4.48□□□□□ -1.69
SLIRP-203ENST00000554074 LINC00479Q96M42 142 aa4.48□□□□□ -1.69
SLIRP-203ENST00000554074 MSRB1Q9NZV6 116 aa4.48□□□□□ -1.69
SLIRP-203ENST00000554074 NAGKQ9UJ70 344 aa4.48□□□□□ -1.69
SLIRP-203ENST00000554074 A0A087WTM6 91 aa4.47□□□□□ -1.69
SLIRP-203ENST00000554074 TRBV6-4A0A1B0GX49 114 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms