RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 PNRC1Q12796 327 aaPredicted RBP8.7□□□□□ -1.02
SHMT2-209ENST00000553949 C15orf54Q8N8G6 183 aa8.7□□□□□ -1.02
SHMT2-209ENST00000553949 RASL10AQ92737 203 aa8.7□□□□□ -1.02
SHMT2-209ENST00000553949 SFRP2Q96HF1 295 aa8.7□□□□□ -1.02
SHMT2-209ENST00000553949 SEC11CQ9BY50 192 aa8.7□□□□□ -1.02
SHMT2-209ENST00000553949 SCRT2Q9NQ03 307 aa8.7□□□□□ -1.02
SHMT2-209ENST00000553949 DNAH7Q8WXX0 4024 aa8.7□□□□□ -1.02
SHMT2-209ENST00000553949 Q6ZTC4 211 aa8.69□□□□□ -1.02
SHMT2-209ENST00000553949 OR10G8Q8NGN5 311 aa8.69□□□□□ -1.02
SHMT2-209ENST00000553949 PTH2Q96A98 100 aa8.69□□□□□ -1.02
SHMT2-209ENST00000553949 SSBP4Q9BWG4 385 aaPredicted RBP8.69□□□□□ -1.02
SHMT2-209ENST00000553949 TRGV2A0A075B6R0 118 aa8.68□□□□□ -1.02
SHMT2-209ENST00000553949 SNAI2O43623 268 aa8.68□□□□□ -1.02
SHMT2-209ENST00000553949 IGLC6P0CF74 106 aa8.68□□□□□ -1.02
SHMT2-209ENST00000553949 ZNF876PQ49A33 203 aa8.68□□□□□ -1.02
SHMT2-209ENST00000553949 CT83Q5H943 113 aa8.68□□□□□ -1.02
SHMT2-209ENST00000553949 SLC7A5P1Q8MH63 180 aa8.68□□□□□ -1.02
SHMT2-209ENST00000553949 FER1L6-AS1Q8NA97 138 aa8.68□□□□□ -1.02
SHMT2-209ENST00000553949 C18orf15Q96N68 181 aa8.68□□□□□ -1.02
SHMT2-209ENST00000553949 PHLDA3Q9Y5J5 127 aa8.68□□□□□ -1.02
SHMT2-209ENST00000553949 V9GYV3 84 aa8.68□□□□□ -1.02
SHMT2-209ENST00000553949 A8MWL6 223 aa8.67□□□□□ -1.02
SHMT2-209ENST00000553949 OR5AL1P0C617 328 aa8.67□□□□□ -1.02
SHMT2-209ENST00000553949 C10orf91Q5T1B1 145 aa8.67□□□□□ -1.02
SHMT2-209ENST00000553949 GTSF1Q8WW33 167 aa8.67□□□□□ -1.02
SHMT2-209ENST00000553949 TPPP3Q9BW30 176 aa8.67□□□□□ -1.02
SHMT2-209ENST00000553949 A0A1W2PPQ1 181 aa8.66□□□□□ -1.02
SHMT2-209ENST00000553949 NDUFA5Q16718 116 aa8.66□□□□□ -1.02
SHMT2-209ENST00000553949 PIK3CD-AS1Q5SR53 167 aa8.66□□□□□ -1.02
SHMT2-209ENST00000553949 DMRTA1Q5VZB9 504 aa8.66□□□□□ -1.02
SHMT2-209ENST00000553949 ZFP82Q8N141 532 aa8.66□□□□□ -1.02
SHMT2-209ENST00000553949 SYT8Q8NBV8 401 aa8.66□□□□□ -1.02
SHMT2-209ENST00000553949 OR10AG1Q8NH19 301 aa8.66□□□□□ -1.02
SHMT2-209ENST00000553949 MUC7Q8TAX7 377 aa8.66□□□□□ -1.02
SHMT2-209ENST00000553949 TSKUQ8WUA8 353 aa8.66□□□□□ -1.02
SHMT2-209ENST00000553949 PHLDA1Q8WV24 401 aaPredicted RBP8.66□□□□□ -1.02
SHMT2-209ENST00000553949 NDUFAF3Q9BU61 184 aa8.66□□□□□ -1.02
SHMT2-209ENST00000553949 CARHSP1Q9Y2V2 147 aaKnown RBP8.66□□□□□ -1.02
SHMT2-209ENST00000553949 DEFB131BA0A096LNP1 70 aa8.65□□□□□ -1.02
SHMT2-209ENST00000553949 TRAV10A0A0B4J240 114 aa8.65□□□□□ -1.02
SHMT2-209ENST00000553949 MUC21A0A0G2JKD1 596 aa8.65□□□□□ -1.02
SHMT2-209ENST00000553949 MUC21A0A140T8X8 626 aa8.65□□□□□ -1.02
SHMT2-209ENST00000553949 F2Z2F3 143 aa8.65□□□□□ -1.02
SHMT2-209ENST00000553949 M0R381 172 aa8.65□□□□□ -1.02
SHMT2-209ENST00000553949 NXPH4O95158 308 aa8.65□□□□□ -1.02
SHMT2-209ENST00000553949 ATP5G1P05496 136 aa8.65□□□□□ -1.02
SHMT2-209ENST00000553949 HTN3P15516 51 aa8.65□□□□□ -1.02
SHMT2-209ENST00000553949 CTRLP40313 264 aa8.65□□□□□ -1.02
SHMT2-209ENST00000553949 RNF212Q495C1 297 aa8.65□□□□□ -1.02
SHMT2-209ENST00000553949 SPANXN1Q5VSR9 72 aa8.65□□□□□ -1.02
SHMT2-209ENST00000553949 LYZL1Q6UWQ5 148 aa8.65□□□□□ -1.02
SHMT2-209ENST00000553949 GFRA4Q9GZZ7 299 aa8.65□□□□□ -1.02
SHMT2-209ENST00000553949 DYNC2H1Q8NCM8 4307 aaKnown RBP8.65□□□□□ -1.02
SHMT2-209ENST00000553949 TRAV4A0A0B4J268 109 aa8.64□□□□□ -1.03
SHMT2-209ENST00000553949 FAM231BA6NCW3 169 aa8.64□□□□□ -1.03
SHMT2-209ENST00000553949 PPP1R2P9O14990 202 aa8.64□□□□□ -1.03
SHMT2-209ENST00000553949 IGHV3-53P01767 116 aa8.64□□□□□ -1.03
SHMT2-209ENST00000553949 MT-ND4LP03901 98 aa8.64□□□□□ -1.03
SHMT2-209ENST00000553949 FOXA3P55318 350 aaPredicted RBP8.64□□□□□ -1.03
SHMT2-209ENST00000553949 SSTP61278 116 aa8.64□□□□□ -1.03
SHMT2-209ENST00000553949 CACNG7P62955 275 aa8.64□□□□□ -1.03
SHMT2-209ENST00000553949 POM121L12Q8N7R1 296 aa8.64□□□□□ -1.03
SHMT2-209ENST00000553949 OR4C5Q8NGB2 326 aa8.64□□□□□ -1.03
SHMT2-209ENST00000553949 IGHV4-4A0A075B6R2 117 aa8.63□□□□□ -1.03
SHMT2-209ENST00000553949 HIGD1CA8MV81 97 aa8.63□□□□□ -1.03
SHMT2-209ENST00000553949 A8MWV9 139 aa8.63□□□□□ -1.03
SHMT2-209ENST00000553949 F5H768 121 aa8.63□□□□□ -1.03
SHMT2-209ENST00000553949 RS1O15537 224 aa8.63□□□□□ -1.03
SHMT2-209ENST00000553949 HOXA5P20719 270 aa8.63□□□□□ -1.03
SHMT2-209ENST00000553949 CFAP126Q5VTH2 177 aa8.63□□□□□ -1.03
SHMT2-209ENST00000553949 ZFAND6Q6FIF0 208 aa8.63□□□□□ -1.03
SHMT2-209ENST00000553949 CEMP1Q6PRD7 247 aaPredicted RBP8.63□□□□□ -1.03
SHMT2-209ENST00000553949 ANAPC16Q96DE5 110 aa8.63□□□□□ -1.03
SHMT2-209ENST00000553949 ZNF479Q96JC4 524 aa8.63□□□□□ -1.03
SHMT2-209ENST00000553949 PGLYRP4Q96LB8 373 aa8.63□□□□□ -1.03
SHMT2-209ENST00000553949 STARD9Q9P2P6 4700 aa8.63□□□□□ -1.03
SHMT2-209ENST00000553949 SMIM27A0A1W2PRY6 76 aa8.62□□□□□ -1.03
SHMT2-209ENST00000553949 NUPR2A6NF83 97 aa8.62□□□□□ -1.03
SHMT2-209ENST00000553949 WDR73Q6P4I2 378 aa8.62□□□□□ -1.03
SHMT2-209ENST00000553949 CNFNQ9BYD5 112 aa8.62□□□□□ -1.03
SHMT2-209ENST00000553949 SAMD10Q9BYL1 202 aa8.62□□□□□ -1.03
SHMT2-209ENST00000553949 JPT2Q9H910 190 aa8.62□□□□□ -1.03
SHMT2-209ENST00000553949 NAT8BQ9UHF3 227 aa8.62□□□□□ -1.03
SHMT2-209ENST00000553949 MUC4Q99102 2169 aa8.62□□□□□ -1.03
SHMT2-209ENST00000553949 C3orf84H3BNL1 204 aa8.61□□□□□ -1.03
SHMT2-209ENST00000553949 APOC3P02656 99 aa8.61□□□□□ -1.03
SHMT2-209ENST00000553949 NTF3P20783 257 aa8.61□□□□□ -1.03
SHMT2-209ENST00000553949 FHL2Q14192 279 aa8.61□□□□□ -1.03
SHMT2-209ENST00000553949 CLRN3Q8NCR9 226 aa8.61□□□□□ -1.03
SHMT2-209ENST00000553949 NUP35Q8NFH5 326 aa8.61□□□□□ -1.03
SHMT2-209ENST00000553949 MSRB1Q9NZV6 116 aa8.61□□□□□ -1.03
SHMT2-209ENST00000553949 A0A087WWL8 130 aa8.6□□□□□ -1.03
SHMT2-209ENST00000553949 IGHV3-73A0A0B4J1V6 119 aa8.6□□□□□ -1.03
SHMT2-209ENST00000553949 TRGV4A0A0C4DH28 118 aa8.6□□□□□ -1.03
SHMT2-209ENST00000553949 C7orf77A4D0Y5 90 aa8.6□□□□□ -1.03
SHMT2-209ENST00000553949 CIDEAO60543 219 aa8.6□□□□□ -1.03
SHMT2-209ENST00000553949 CRYGDP07320 174 aa8.6□□□□□ -1.03
SHMT2-209ENST00000553949 TWIST1Q15672 202 aa8.6□□□□□ -1.03
SHMT2-209ENST00000553949 UFSP1Q6NVU6 142 aa8.6□□□□□ -1.03
SHMT2-209ENST00000553949 ZFP2Q6ZN57 461 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms