RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 GPR179Q6PRD1 2367 aa1.04□□□□□ -2.24
SRP54-204ENST00000553923 IGLV3-32A0A0A0MS00 114 aa1.04□□□□□ -2.24
SRP54-204ENST00000553923 TRAV12-3A0A0B4J271 114 aa1.04□□□□□ -2.24
SRP54-204ENST00000553923 TRBV10-1A0A0K0K1A3 114 aa1.04□□□□□ -2.24
SRP54-204ENST00000553923 RPL37AP61513 92 aaKnown RBP1.04□□□□□ -2.24
SRP54-204ENST00000553923 LINC00322Q6ZN03 302 aaPredicted RBP1.04□□□□□ -2.24
SRP54-204ENST00000553923 CYP2G1PQ6ZSU1 146 aa1.04□□□□□ -2.24
SRP54-204ENST00000553923 TTC9CQ8N5M4 171 aa1.04□□□□□ -2.24
SRP54-204ENST00000553923 Q8N8P6 123 aa1.04□□□□□ -2.24
SRP54-204ENST00000553923 AQP10Q96PS8 301 aa1.04□□□□□ -2.24
SRP54-204ENST00000553923 MALRD1Q5VYJ5 2156 aa1.04□□□□□ -2.24
SRP54-204ENST00000553923 ADAMTS7Q9UKP4 1686 aa1.04□□□□□ -2.24
SRP54-204ENST00000553923 COL24A1Q17RW2 1714 aa1.03□□□□□ -2.24
SRP54-204ENST00000553923 ZSWIM8A7E2V4 1837 aa1.03□□□□□ -2.24
SRP54-204ENST00000553923 A0A0J9YY99 117 aa1.03□□□□□ -2.24
SRP54-204ENST00000553923 MRPS14O60783 128 aaKnown RBP1.03□□□□□ -2.24
SRP54-204ENST00000553923 MPC2O95563 127 aa1.03□□□□□ -2.24
SRP54-204ENST00000553923 IGLV3-1P01715 115 aa1.03□□□□□ -2.24
SRP54-204ENST00000553923 DEFB103AP81534 67 aa1.03□□□□□ -2.24
SRP54-204ENST00000553923 SPATA45Q537H7 98 aa1.03□□□□□ -2.24
SRP54-204ENST00000553923 C5orf38Q86SI9 138 aa1.03□□□□□ -2.24
SRP54-204ENST00000553923 C10orf82Q8WW14 230 aa1.03□□□□□ -2.24
SRP54-204ENST00000553923 MED9Q9NWA0 146 aa1.03□□□□□ -2.24
SRP54-204ENST00000553923 USP54Q70EL1 1684 aa1.03□□□□□ -2.24
SRP54-204ENST00000553923 EML6Q6ZMW3 1958 aa1.03□□□□□ -2.25
SRP54-204ENST00000553923 IGKV3-7A0A075B6H7 116 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 TRAV13-2A0A0B4J235 113 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 IGKV3D-7A0A0C4DH55 119 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 IGKV3OR2-268A0A0C4DH90 116 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 TRBV10-3A0A0K0K1G6 114 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 CXorf51AA0A1B0GTR3 108 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 UBE2L5PA0A1B0GUS4 154 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 LOC101927531A0A1B0GV80 90 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 HIGD1CA8MV81 97 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 HCG22E2RYF7 251 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 ADGRB1O14514 1584 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 HCRTO43612 131 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 LRP5O75197 1615 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 DAPK1P53355 1430 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 FXYD4P59646 89 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 GNG11P61952 73 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 UBA52P62987 128 aaKnown RBP1.02□□□□□ -2.25
SRP54-204ENST00000553923 UBE2L3P68036 154 aaKnown RBP1.02□□□□□ -2.25
SRP54-204ENST00000553923 DCDP81605 110 aaKnown RBP1.02□□□□□ -2.25
SRP54-204ENST00000553923 C10orf128Q5T292 105 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 GDF5OSQ5U4N7 250 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 BCL9LQ86UU0 1499 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 VPS8Q8N3P4 1428 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 MYOZ3Q8TDC0 251 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 ODF3Q96PU9 254 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 SNHG12Q9BXW3 62 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 DPH3P1Q9H4G8 78 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 C22orf24Q9Y442 160 aa1.02□□□□□ -2.25
SRP54-204ENST00000553923 HEATR5AQ86XA9 2040 aa1.01□□□□□ -2.25
SRP54-204ENST00000553923 COL11A1P12107 1806 aaPredicted RBP1.01□□□□□ -2.25
SRP54-204ENST00000553923 RBAKDNA6NC62 111 aa1.01□□□□□ -2.25
SRP54-204ENST00000553923 TMEM262E9PQX1 116 aa1.01□□□□□ -2.25
SRP54-204ENST00000553923 FXYD1O00168 92 aa1.01□□□□□ -2.25
SRP54-204ENST00000553923 GNGT2O14610 69 aa1.01□□□□□ -2.25
SRP54-204ENST00000553923 INE1O15225 51 aa1.01□□□□□ -2.25
SRP54-204ENST00000553923 SSSCA1O60232 199 aa1.01□□□□□ -2.25
SRP54-204ENST00000553923 IGHV3-30P01768 117 aa1.01□□□□□ -2.25
SRP54-204ENST00000553923 IGHV3-30-5P0DP03 117 aa1.01□□□□□ -2.25
SRP54-204ENST00000553923 PDE6GP18545 87 aa1.01□□□□□ -2.25
SRP54-204ENST00000553923 ATP5EP56381 51 aaPredicted RBP1.01□□□□□ -2.25
SRP54-204ENST00000553923 KRTAP13-4Q3LI77 160 aa1.01□□□□□ -2.25
SRP54-204ENST00000553923 Q86TA4 180 aa1.01□□□□□ -2.25
SRP54-204ENST00000553923 ZNF563Q8TA94 476 aa1.01□□□□□ -2.25
SRP54-204ENST00000553923 OBSCN-AS1Q96MR7 158 aa1.01□□□□□ -2.25
SRP54-204ENST00000553923 VAMP8Q9BV40 100 aa1.01□□□□□ -2.25
SRP54-204ENST00000553923 DPY30Q9C005 99 aa1.01□□□□□ -2.25
SRP54-204ENST00000553923 PLXNA3P51805 1871 aa1.01□□□□□ -2.25
SRP54-204ENST00000553923 STRCQ7RTU9 1775 aa1.01□□□□□ -2.25
SRP54-204ENST00000553923 OTOGLQ3ZCN5 2332 aa1□□□□□ -2.25
SRP54-204ENST00000553923 SHANK1Q9Y566 2161 aa1□□□□□ -2.25
SRP54-204ENST00000553923 CPSF1Q10570 1443 aaKnown RBP1□□□□□ -2.25
SRP54-204ENST00000553923 ARHGAP32A7KAX9 2087 aa1□□□□□ -2.25
SRP54-204ENST00000553923 NCKAP5O14513 1909 aa1□□□□□ -2.25
SRP54-204ENST00000553923 IGKV2-40A0A087WW87 121 aaPredicted RBP1□□□□□ -2.25
SRP54-204ENST00000553923 IGKV2-29A2NJV5 120 aaPredicted RBP1□□□□□ -2.25
SRP54-204ENST00000553923 M0R2N4 97 aa1□□□□□ -2.25
SRP54-204ENST00000553923 IGKV2D-40P01614 121 aaPredicted RBP1□□□□□ -2.25
SRP54-204ENST00000553923 LINC00032P0C843 101 aa1□□□□□ -2.25
SRP54-204ENST00000553923 COMMD6Q7Z4G1 85 aa1□□□□□ -2.25
SRP54-204ENST00000553923 NDUFA11Q86Y39 141 aa1□□□□□ -2.25
SRP54-204ENST00000553923 SBSPONQ8IVN8 264 aa1□□□□□ -2.25
SRP54-204ENST00000553923 C4orf33Q8N1A6 199 aa1□□□□□ -2.25
SRP54-204ENST00000553923 C20orf197Q8N268 126 aa1□□□□□ -2.25
SRP54-204ENST00000553923 TSLPQ969D9 159 aa1□□□□□ -2.25
SRP54-204ENST00000553923 LINC00312Q9Y6C7 94 aa1□□□□□ -2.25
SRP54-204ENST00000553923 FOCADQ5VW36 1801 aa1□□□□□ -2.25
SRP54-204ENST00000553923 KIDINS220Q9ULH0 1771 aa1□□□□□ -2.25
SRP54-204ENST00000553923 SIPA1L2Q9P2F8 1722 aaPredicted RBP1□□□□□ -2.25
SRP54-204ENST00000553923 POLEQ07864 2286 aa1□□□□□ -2.25
SRP54-204ENST00000553923 CCDC88CQ9P219 2028 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 PTPRBP23467 1997 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 ABCC10Q5T3U5 1492 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 ANAPC1Q9H1A4 1944 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 KIF13AQ9H1H9 1805 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 RBBP6Q7Z6E9 1792 aaKnown RBP0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms