RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 GAGE4Q13068 117 aa9.23□□□□□ -0.93
NEDD1-205ENST00000553609 GAGE5Q13069 117 aa9.23□□□□□ -0.93
NEDD1-205ENST00000553609 GAGE13Q4V321 117 aa9.23□□□□□ -0.93
NEDD1-205ENST00000553609 TOR2AQ5JU69 321 aa9.23□□□□□ -0.93
NEDD1-205ENST00000553609 FFAR4Q5NUL3 377 aa9.23□□□□□ -0.93
NEDD1-205ENST00000553609 Q8N976 141 aa9.23□□□□□ -0.93
NEDD1-205ENST00000553609 TMEM75Q8N9X5 138 aa9.23□□□□□ -0.93
NEDD1-205ENST00000553609 CMTM2Q8TAZ6 248 aa9.23□□□□□ -0.93
NEDD1-205ENST00000553609 MBD2Q9UBB5 411 aa9.23□□□□□ -0.93
NEDD1-205ENST00000553609 COX11Q9Y6N1 276 aa9.23□□□□□ -0.93
NEDD1-205ENST00000553609 TNXBP22105 4242 aa9.22□□□□□ -0.93
NEDD1-205ENST00000553609 GGTLC3B5MD39 225 aa9.22□□□□□ -0.93
NEDD1-205ENST00000553609 C17orf112F2Z3M2 114 aa9.22□□□□□ -0.93
NEDD1-205ENST00000553609 MT1HL1P0DM35 61 aa9.22□□□□□ -0.93
NEDD1-205ENST00000553609 TAS2R45P59539 299 aa9.22□□□□□ -0.93
NEDD1-205ENST00000553609 DAZAP1Q96EP5 407 aaKnown RBP9.22□□□□□ -0.93
NEDD1-205ENST00000553609 SGK494Q96LW2 274 aa9.22□□□□□ -0.93
NEDD1-205ENST00000553609 NMES1Q9C002 83 aa9.22□□□□□ -0.93
NEDD1-205ENST00000553609 PARLQ9H300 379 aa9.22□□□□□ -0.93
NEDD1-205ENST00000553609 SIX6O95475 246 aa9.21□□□□□ -0.94
NEDD1-205ENST00000553609 ACOT6Q3I5F7 207 aaPredicted RBP9.21□□□□□ -0.94
NEDD1-205ENST00000553609 UFSP1Q6NVU6 142 aa9.21□□□□□ -0.94
NEDD1-205ENST00000553609 ZFP2Q6ZN57 461 aa9.21□□□□□ -0.94
NEDD1-205ENST00000553609 LINC00479Q96M42 142 aa9.21□□□□□ -0.94
NEDD1-205ENST00000553609 IGLV2-11P01706 119 aa9.2□□□□□ -0.94
NEDD1-205ENST00000553609 LRRC37A5PQ49AS3 106 aa9.2□□□□□ -0.94
NEDD1-205ENST00000553609 FAM74A1Q5RGS3 127 aa9.2□□□□□ -0.94
NEDD1-205ENST00000553609 ATRAIDQ6UW56 229 aa9.2□□□□□ -0.94
NEDD1-205ENST00000553609 NIT1Q86X76 327 aa9.2□□□□□ -0.94
NEDD1-205ENST00000553609 CYB561D1Q8N8Q1 229 aa9.2□□□□□ -0.94
NEDD1-205ENST00000553609 SAMD10Q9BYL1 202 aa9.2□□□□□ -0.94
NEDD1-205ENST00000553609 IGKV2D-24A0A075B6R9 120 aa9.19□□□□□ -0.94
NEDD1-205ENST00000553609 A0A087WWC5 75 aa9.19□□□□□ -0.94
NEDD1-205ENST00000553609 TAAR5O14804 337 aa9.19□□□□□ -0.94
NEDD1-205ENST00000553609 GCGP01275 180 aa9.19□□□□□ -0.94
NEDD1-205ENST00000553609 RPL37AP61513 92 aaKnown RBP9.19□□□□□ -0.94
NEDD1-205ENST00000553609 PQLC2Q6ZP29 291 aa9.19□□□□□ -0.94
NEDD1-205ENST00000553609 C14orf178Q8N769 122 aaPredicted RBP9.19□□□□□ -0.94
NEDD1-205ENST00000553609 RMI2Q96E14 147 aa9.19□□□□□ -0.94
NEDD1-205ENST00000553609 SH3BGRL3Q9H299 93 aa9.19□□□□□ -0.94
NEDD1-205ENST00000553609 JPT2Q9H910 190 aa9.19□□□□□ -0.94
NEDD1-205ENST00000553609 PIK3CD-AS1Q5SR53 167 aa9.18□□□□□ -0.94
NEDD1-205ENST00000553609 OR2T35Q8NGX2 323 aa9.18□□□□□ -0.94
NEDD1-205ENST00000553609 KLK12Q9UKR0 248 aa9.18□□□□□ -0.94
NEDD1-205ENST00000553609 HSPB11Q9Y547 144 aa9.18□□□□□ -0.94
NEDD1-205ENST00000553609 A8MWV9 139 aa9.17□□□□□ -0.94
NEDD1-205ENST00000553609 TCRAP04437 139 aa9.17□□□□□ -0.94
NEDD1-205ENST00000553609 NDFIP1Q9BT67 221 aa9.17□□□□□ -0.94
NEDD1-205ENST00000553609 PSG8Q9UQ74 426 aa9.17□□□□□ -0.94
NEDD1-205ENST00000553609 IGKV3D-20A0A0C4DH25 116 aa9.16□□□□□ -0.94
NEDD1-205ENST00000553609 FAM240BA0A1B0GVZ2 78 aa9.16□□□□□ -0.94
NEDD1-205ENST00000553609 SERTM2A0A1B0GWG4 89 aa9.16□□□□□ -0.94
NEDD1-205ENST00000553609 H2BFSP57053 126 aa9.16□□□□□ -0.94
NEDD1-205ENST00000553609 RAB2AP61019 212 aa9.16□□□□□ -0.94
NEDD1-205ENST00000553609 UBE2WQ96B02 151 aa9.16□□□□□ -0.94
NEDD1-205ENST00000553609 HMGB3O15347 200 aaKnown RBP9.15□□□□□ -0.94
NEDD1-205ENST00000553609 C5orf17Q8NAS9 161 aa9.15□□□□□ -0.94
NEDD1-205ENST00000553609 PPP1R1CQ8WVI7 109 aa9.15□□□□□ -0.94
NEDD1-205ENST00000553609 CHCHD7Q9BUK0 85 aa9.15□□□□□ -0.94
NEDD1-205ENST00000553609 SMIM3Q9BZL3 60 aa9.15□□□□□ -0.94
NEDD1-205ENST00000553609 WFDC1Q9HC57 220 aa9.15□□□□□ -0.94
NEDD1-205ENST00000553609 LOC100996750A0A140TA64 210 aa9.14□□□□□ -0.95
NEDD1-205ENST00000553609 ARL14EPLP0DKL9 152 aa9.14□□□□□ -0.95
NEDD1-205ENST00000553609 FGF8P55075 233 aaPredicted RBP9.14□□□□□ -0.95
NEDD1-205ENST00000553609 FLI1Q01543 452 aaPredicted RBP9.14□□□□□ -0.95
NEDD1-205ENST00000553609 SMUG1Q53HV7 270 aa9.14□□□□□ -0.95
NEDD1-205ENST00000553609 SUN5Q8TC36 379 aa9.14□□□□□ -0.95
NEDD1-205ENST00000553609 SCGB1C1Q8TD33 95 aa9.14□□□□□ -0.95
NEDD1-205ENST00000553609 CCDC32Q9BV29 185 aa9.14□□□□□ -0.95
NEDD1-205ENST00000553609 KRTAP4-6Q9BYQ5 205 aa9.14□□□□□ -0.95
NEDD1-205ENST00000553609 URGCP-MRPS24S4R325 110 aa9.14□□□□□ -0.95
NEDD1-205ENST00000553609 PANO1I0J062 215 aa9.13□□□□□ -0.95
NEDD1-205ENST00000553609 SEC11BP0C7V7 166 aa9.13□□□□□ -0.95
NEDD1-205ENST00000553609 LGALSLQ3ZCW2 172 aaPredicted RBP9.13□□□□□ -0.95
NEDD1-205ENST00000553609 OR10G9Q8NGN4 311 aa9.13□□□□□ -0.95
NEDD1-205ENST00000553609 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.13□□□□□ -0.95
NEDD1-205ENST00000553609 A0A1W2PPV4 95 aa9.12□□□□□ -0.95
NEDD1-205ENST00000553609 STAG3L2P0CL84 134 aa9.12□□□□□ -0.95
NEDD1-205ENST00000553609 STAG3L3P0CL85 134 aa9.12□□□□□ -0.95
NEDD1-205ENST00000553609 RPL12P30050 165 aaKnown RBP9.12□□□□□ -0.95
NEDD1-205ENST00000553609 CYCSP99999 105 aaKnown RBP9.12□□□□□ -0.95
NEDD1-205ENST00000553609 C14orf177Q52M58 125 aa9.12□□□□□ -0.95
NEDD1-205ENST00000553609 ENHOQ6UWT2 76 aa9.12□□□□□ -0.95
NEDD1-205ENST00000553609 PRNTQ86SH4 94 aa9.12□□□□□ -0.95
NEDD1-205ENST00000553609 OR10G7Q8NGN6 311 aa9.12□□□□□ -0.95
NEDD1-205ENST00000553609 IL36BQ9NZH7 164 aa9.12□□□□□ -0.95
NEDD1-205ENST00000553609 A0A087WX48 190 aa9.11□□□□□ -0.95
NEDD1-205ENST00000553609 MPC2O95563 127 aa9.11□□□□□ -0.95
NEDD1-205ENST00000553609 ASIPP42127 132 aa9.11□□□□□ -0.95
NEDD1-205ENST00000553609 ELOBQ15370 118 aa9.11□□□□□ -0.95
NEDD1-205ENST00000553609 ZFP69Q49AA0 526 aa9.11□□□□□ -0.95
NEDD1-205ENST00000553609 EPDR1Q9UM22 224 aa9.11□□□□□ -0.95
NEDD1-205ENST00000553609 USP17L23D6RBM5 183 aa9.1□□□□□ -0.95
NEDD1-205ENST00000553609 H3BVH4 76 aa9.1□□□□□ -0.95
NEDD1-205ENST00000553609 RHODO00212 210 aa9.1□□□□□ -0.95
NEDD1-205ENST00000553609 PRSS1P07477 247 aa9.1□□□□□ -0.95
NEDD1-205ENST00000553609 S100A4P26447 101 aaKnown RBP9.1□□□□□ -0.95
NEDD1-205ENST00000553609 GCHFRP30047 84 aa9.1□□□□□ -0.95
NEDD1-205ENST00000553609 SUMO1P63165 101 aaKnown RBP9.1□□□□□ -0.95
NEDD1-205ENST00000553609 Q0VG73 95 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms