RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 DEFA3P59666 94 aa6.69□□□□□ -1.34
ACTN1-208ENST00000553370 IFITM3Q01628 133 aa6.69□□□□□ -1.34
ACTN1-208ENST00000553370 IL15RAQ13261 267 aa6.69□□□□□ -1.34
ACTN1-208ENST00000553370 ASAH1Q13510 395 aa6.69□□□□□ -1.34
ACTN1-208ENST00000553370 ACOT6Q3I5F7 207 aaPredicted RBP6.69□□□□□ -1.34
ACTN1-208ENST00000553370 TMED6Q8WW62 240 aa6.69□□□□□ -1.34
ACTN1-208ENST00000553370 MBD2Q9UBB5 411 aa6.69□□□□□ -1.34
ACTN1-208ENST00000553370 IGHV3-73A0A0B4J1V6 119 aa6.68□□□□□ -1.34
ACTN1-208ENST00000553370 KRTAP23-1A1A580 65 aa6.68□□□□□ -1.34
ACTN1-208ENST00000553370 GNRH2O43555 120 aa6.68□□□□□ -1.34
ACTN1-208ENST00000553370 TYMSP04818 313 aa6.68□□□□□ -1.34
ACTN1-208ENST00000553370 RHOHQ15669 191 aa6.68□□□□□ -1.34
ACTN1-208ENST00000553370 ZNF876PQ49A33 203 aa6.68□□□□□ -1.34
ACTN1-208ENST00000553370 LINC01556Q5JQF7 62 aa6.68□□□□□ -1.34
ACTN1-208ENST00000553370 PQLC2Q6ZP29 291 aa6.68□□□□□ -1.34
ACTN1-208ENST00000553370 PPP1R1CQ8WVI7 109 aa6.68□□□□□ -1.34
ACTN1-208ENST00000553370 TMEM70Q9BUB7 260 aa6.68□□□□□ -1.34
ACTN1-208ENST00000553370 HSPB11Q9Y547 144 aa6.68□□□□□ -1.34
ACTN1-208ENST00000553370 TRAV8-1A0A0A6YYK1 113 aa6.67□□□□□ -1.34
ACTN1-208ENST00000553370 EIF3GO75821 320 aaKnown RBP eCLIP6.67□□□□□ -1.34
ACTN1-208ENST00000553370 GATA1P15976 413 aaPredicted RBP6.67□□□□□ -1.34
ACTN1-208ENST00000553370 RPL12P30050 165 aaKnown RBP6.67□□□□□ -1.34
ACTN1-208ENST00000553370 SUMO2P61956 95 aaKnown RBP6.67□□□□□ -1.34
ACTN1-208ENST00000553370 GNG5P63218 68 aa6.67□□□□□ -1.34
ACTN1-208ENST00000553370 RGS21Q2M5E4 152 aa6.67□□□□□ -1.34
ACTN1-208ENST00000553370 TDRG1Q3Y452 100 aa6.67□□□□□ -1.34
ACTN1-208ENST00000553370 TM2D2Q9BX73 214 aa6.67□□□□□ -1.34
ACTN1-208ENST00000553370 SH3BGRL3Q9H299 93 aa6.67□□□□□ -1.34
ACTN1-208ENST00000553370 MYCBP2O75592 4640 aa6.66□□□□□ -1.34
ACTN1-208ENST00000553370 INMT-MINDY4F8WBC2 141 aa6.66□□□□□ -1.34
ACTN1-208ENST00000553370 HMGB3O15347 200 aaKnown RBP6.66□□□□□ -1.34
ACTN1-208ENST00000553370 SCGB1D1O95968 90 aa6.66□□□□□ -1.34
ACTN1-208ENST00000553370 PTTG1O95997 202 aa6.66□□□□□ -1.34
ACTN1-208ENST00000553370 Q8N814 137 aa6.66□□□□□ -1.34
ACTN1-208ENST00000553370 SGK494Q96LW2 274 aa6.66□□□□□ -1.34
ACTN1-208ENST00000553370 SERTM2A0A1B0GWG4 89 aa6.65□□□□□ -1.34
ACTN1-208ENST00000553370 IBA57-AS1B1ANH7 110 aa6.65□□□□□ -1.34
ACTN1-208ENST00000553370 H0YIZ8 118 aa6.65□□□□□ -1.34
ACTN1-208ENST00000553370 TAAR5O14804 337 aa6.65□□□□□ -1.34
ACTN1-208ENST00000553370 CIDEAO60543 219 aa6.65□□□□□ -1.34
ACTN1-208ENST00000553370 MPC2O95563 127 aa6.65□□□□□ -1.34
ACTN1-208ENST00000553370 ARL14EPLP0DKL9 152 aa6.65□□□□□ -1.34
ACTN1-208ENST00000553370 S100A4P26447 101 aaKnown RBP6.65□□□□□ -1.34
ACTN1-208ENST00000553370 CDC34P49427 236 aaPredicted RBP6.65□□□□□ -1.34
ACTN1-208ENST00000553370 RAB2AP61019 212 aa6.65□□□□□ -1.34
ACTN1-208ENST00000553370 LELP1Q5T871 98 aa6.65□□□□□ -1.34
ACTN1-208ENST00000553370 SLC25A29Q8N8R3 303 aa6.65□□□□□ -1.34
ACTN1-208ENST00000553370 OR10G9Q8NGN4 311 aa6.65□□□□□ -1.34
ACTN1-208ENST00000553370 OR10G7Q8NGN6 311 aa6.65□□□□□ -1.34
ACTN1-208ENST00000553370 ATP6V0E2Q8NHE4 81 aa6.65□□□□□ -1.34
ACTN1-208ENST00000553370 URGCP-MRPS24S4R325 110 aa6.65□□□□□ -1.34
ACTN1-208ENST00000553370 GCGP01275 180 aa6.64□□□□□ -1.35
ACTN1-208ENST00000553370 MGST1P10620 155 aaKnown RBP6.64□□□□□ -1.35
ACTN1-208ENST00000553370 LGALSLQ3ZCW2 172 aaPredicted RBP6.64□□□□□ -1.35
ACTN1-208ENST00000553370 SMUG1Q53HV7 270 aa6.64□□□□□ -1.35
ACTN1-208ENST00000553370 CFAP126Q5VTH2 177 aa6.64□□□□□ -1.35
ACTN1-208ENST00000553370 PRNTQ86SH4 94 aa6.64□□□□□ -1.35
ACTN1-208ENST00000553370 C5orf17Q8NAS9 161 aa6.64□□□□□ -1.35
ACTN1-208ENST00000553370 GTSF1LQ9H1H1 148 aa6.64□□□□□ -1.35
ACTN1-208ENST00000553370 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.63□□□□□ -1.35
ACTN1-208ENST00000553370 TRAV8-3A0A0A6YYJ7 113 aa6.63□□□□□ -1.35
ACTN1-208ENST00000553370 TRBV6-4A0A1B0GX49 114 aa6.63□□□□□ -1.35
ACTN1-208ENST00000553370 LRCOL1A6NCL2 159 aa6.63□□□□□ -1.35
ACTN1-208ENST00000553370 GGTLC3B5MD39 225 aa6.63□□□□□ -1.35
ACTN1-208ENST00000553370 LECT2O14960 151 aa6.63□□□□□ -1.35
ACTN1-208ENST00000553370 RS1O15537 224 aa6.63□□□□□ -1.35
ACTN1-208ENST00000553370 H2BFSP57053 126 aa6.63□□□□□ -1.35
ACTN1-208ENST00000553370 LAGE3Q14657 143 aa6.63□□□□□ -1.35
ACTN1-208ENST00000553370 ZNF506Q5JVG8 444 aa6.63□□□□□ -1.35
ACTN1-208ENST00000553370 KCNIP4Q6PIL6 250 aa6.63□□□□□ -1.35
ACTN1-208ENST00000553370 Q6ZNX1 250 aa6.63□□□□□ -1.35
ACTN1-208ENST00000553370 ARL6IP6Q8N6S5 226 aa6.63□□□□□ -1.35
ACTN1-208ENST00000553370 RMI2Q96E14 147 aa6.63□□□□□ -1.35
ACTN1-208ENST00000553370 GAGE12JA6NER3 117 aa6.62□□□□□ -1.35
ACTN1-208ENST00000553370 GAGE10A6NGK3 116 aa6.62□□□□□ -1.35
ACTN1-208ENST00000553370 GAGE1Q13065 139 aa6.62□□□□□ -1.35
ACTN1-208ENST00000553370 GAGE4Q13068 117 aa6.62□□□□□ -1.35
ACTN1-208ENST00000553370 GAGE5Q13069 117 aa6.62□□□□□ -1.35
ACTN1-208ENST00000553370 TMEM75Q8N9X5 138 aa6.62□□□□□ -1.35
ACTN1-208ENST00000553370 HSD17B11Q8NBQ5 300 aa6.62□□□□□ -1.35
ACTN1-208ENST00000553370 TVP23CQ96ET8 276 aa6.62□□□□□ -1.35
ACTN1-208ENST00000553370 PSG8Q9UQ74 426 aa6.62□□□□□ -1.35
ACTN1-208ENST00000553370 FAT1Q14517 4588 aa6.62□□□□□ -1.35
ACTN1-208ENST00000553370 TCRAP04437 139 aa6.61□□□□□ -1.35
ACTN1-208ENST00000553370 SEC11BP0C7V7 166 aa6.61□□□□□ -1.35
ACTN1-208ENST00000553370 GCHFRP30047 84 aa6.61□□□□□ -1.35
ACTN1-208ENST00000553370 ASIPP42127 132 aa6.61□□□□□ -1.35
ACTN1-208ENST00000553370 FLI1Q01543 452 aaPredicted RBP6.61□□□□□ -1.35
ACTN1-208ENST00000553370 CYB561D1Q8N8Q1 229 aa6.61□□□□□ -1.35
ACTN1-208ENST00000553370 MARVELD1Q9BSK0 173 aa6.61□□□□□ -1.35
ACTN1-208ENST00000553370 TMEM167BQ9NRX6 74 aa6.61□□□□□ -1.35
ACTN1-208ENST00000553370 COX11Q9Y6N1 276 aa6.61□□□□□ -1.35
ACTN1-208ENST00000553370 A0A087WWC5 75 aa6.6□□□□□ -1.35
ACTN1-208ENST00000553370 RBFOX3A6NFN3 312 aa6.6□□□□□ -1.35
ACTN1-208ENST00000553370 A8MWV9 139 aa6.6□□□□□ -1.35
ACTN1-208ENST00000553370 CXorf1O96002 111 aa6.6□□□□□ -1.35
ACTN1-208ENST00000553370 IFNA7P01567 189 aa6.6□□□□□ -1.35
ACTN1-208ENST00000553370 MBP02144 154 aa6.6□□□□□ -1.35
ACTN1-208ENST00000553370 C1QBP02746 253 aa6.6□□□□□ -1.35
ACTN1-208ENST00000553370 ZNF80P51504 273 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms