RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 TAS2R45P59539 299 aa5.9□□□□□ -1.46
SYNE2-209ENST00000553308 LRRC37A5PQ49AS3 106 aa5.9□□□□□ -1.46
SYNE2-209ENST00000553308 CYB561D1Q8N8Q1 229 aa5.9□□□□□ -1.46
SYNE2-209ENST00000553308 RMI2Q96E14 147 aa5.9□□□□□ -1.46
SYNE2-209ENST00000553308 SAMD10Q9BYL1 202 aa5.9□□□□□ -1.46
SYNE2-209ENST00000553308 PARLQ9H300 379 aa5.9□□□□□ -1.46
SYNE2-209ENST00000553308 MBD2Q9UBB5 411 aa5.9□□□□□ -1.46
SYNE2-209ENST00000553308 FAT3Q8TDW7 4589 aa5.89□□□□□ -1.47
SYNE2-209ENST00000553308 H0YIZ8 118 aa5.89□□□□□ -1.47
SYNE2-209ENST00000553308 SIX6O95475 246 aa5.89□□□□□ -1.47
SYNE2-209ENST00000553308 H2AFB2P0C5Z0 115 aa5.89□□□□□ -1.47
SYNE2-209ENST00000553308 FAM74A1Q5RGS3 127 aa5.89□□□□□ -1.47
SYNE2-209ENST00000553308 NIT1Q86X76 327 aa5.89□□□□□ -1.47
SYNE2-209ENST00000553308 C14orf178Q8N769 122 aaPredicted RBP5.89□□□□□ -1.47
SYNE2-209ENST00000553308 OR2T35Q8NGX2 323 aa5.89□□□□□ -1.47
SYNE2-209ENST00000553308 PTH2Q96A98 100 aa5.89□□□□□ -1.47
SYNE2-209ENST00000553308 SH3BGRL3Q9H299 93 aa5.89□□□□□ -1.47
SYNE2-209ENST00000553308 KLK12Q9UKR0 248 aa5.89□□□□□ -1.47
SYNE2-209ENST00000553308 A0A087WWC5 75 aa5.88□□□□□ -1.47
SYNE2-209ENST00000553308 GCGP01275 180 aa5.88□□□□□ -1.47
SYNE2-209ENST00000553308 UBE2WQ96B02 151 aa5.88□□□□□ -1.47
SYNE2-209ENST00000553308 LINC00479Q96M42 142 aa5.88□□□□□ -1.47
SYNE2-209ENST00000553308 NDFIP1Q9BT67 221 aa5.88□□□□□ -1.47
SYNE2-209ENST00000553308 JPT2Q9H910 190 aa5.88□□□□□ -1.47
SYNE2-209ENST00000553308 URGCP-MRPS24S4R325 110 aa5.88□□□□□ -1.47
SYNE2-209ENST00000553308 TAAR5O14804 337 aa5.87□□□□□ -1.47
SYNE2-209ENST00000553308 HMGB3O15347 200 aaKnown RBP5.87□□□□□ -1.47
SYNE2-209ENST00000553308 UFSP1Q6NVU6 142 aa5.87□□□□□ -1.47
SYNE2-209ENST00000553308 ATRAIDQ6UW56 229 aa5.87□□□□□ -1.47
SYNE2-209ENST00000553308 ZFP2Q6ZN57 461 aa5.87□□□□□ -1.47
SYNE2-209ENST00000553308 PQLC2Q6ZP29 291 aa5.87□□□□□ -1.47
SYNE2-209ENST00000553308 ARL6IP6Q8N6S5 226 aa5.87□□□□□ -1.47
SYNE2-209ENST00000553308 A8MWV9 139 aa5.86□□□□□ -1.47
SYNE2-209ENST00000553308 TCRAP04437 139 aa5.86□□□□□ -1.47
SYNE2-209ENST00000553308 SEC11BP0C7V7 166 aa5.86□□□□□ -1.47
SYNE2-209ENST00000553308 RAB2AP61019 212 aa5.86□□□□□ -1.47
SYNE2-209ENST00000553308 LGALSLQ3ZCW2 172 aaPredicted RBP5.86□□□□□ -1.47
SYNE2-209ENST00000553308 SMIM3Q9BZL3 60 aa5.86□□□□□ -1.47
SYNE2-209ENST00000553308 PSG8Q9UQ74 426 aa5.86□□□□□ -1.47
SYNE2-209ENST00000553308 HSPB11Q9Y547 144 aa5.86□□□□□ -1.47
SYNE2-209ENST00000553308 A0A087WX48 190 aa5.85□□□□□ -1.47
SYNE2-209ENST00000553308 IGKV3D-20A0A0C4DH25 116 aa5.85□□□□□ -1.47
SYNE2-209ENST00000553308 A0A1W2PPV4 95 aa5.85□□□□□ -1.47
SYNE2-209ENST00000553308 ARL14EPLP0DKL9 152 aa5.85□□□□□ -1.47
SYNE2-209ENST00000553308 FGF8P55075 233 aaPredicted RBP5.85□□□□□ -1.47
SYNE2-209ENST00000553308 C14orf177Q52M58 125 aa5.85□□□□□ -1.47
SYNE2-209ENST00000553308 SMUG1Q53HV7 270 aa5.85□□□□□ -1.47
SYNE2-209ENST00000553308 PRNTQ86SH4 94 aa5.85□□□□□ -1.47
SYNE2-209ENST00000553308 C5orf17Q8NAS9 161 aa5.85□□□□□ -1.47
SYNE2-209ENST00000553308 SCGB1C1Q8TD33 95 aa5.85□□□□□ -1.47
SYNE2-209ENST00000553308 C1orf43Q9BWL3 253 aa5.85□□□□□ -1.47
SYNE2-209ENST00000553308 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.85□□□□□ -1.47
SYNE2-209ENST00000553308 PKHD1L1Q86WI1 4243 aa5.85□□□□□ -1.47
SYNE2-209ENST00000553308 FAM240BA0A1B0GVZ2 78 aa5.84□□□□□ -1.47
SYNE2-209ENST00000553308 SERTM2A0A1B0GWG4 89 aa5.84□□□□□ -1.47
SYNE2-209ENST00000553308 USP17L23D6RBM5 183 aa5.84□□□□□ -1.47
SYNE2-209ENST00000553308 PANO1I0J062 215 aa5.84□□□□□ -1.47
SYNE2-209ENST00000553308 S100A4P26447 101 aaKnown RBP5.84□□□□□ -1.47
SYNE2-209ENST00000553308 FLI1Q01543 452 aaPredicted RBP5.84□□□□□ -1.47
SYNE2-209ENST00000553308 ELOBQ15370 118 aa5.84□□□□□ -1.47
SYNE2-209ENST00000553308 ZFP69Q49AA0 526 aa5.84□□□□□ -1.47
SYNE2-209ENST00000553308 PIK3CD-AS1Q5SR53 167 aa5.84□□□□□ -1.47
SYNE2-209ENST00000553308 FAM74A4Q5TZK3 123 aa5.84□□□□□ -1.47
SYNE2-209ENST00000553308 DMRTA1Q5VZB9 504 aa5.84□□□□□ -1.47
SYNE2-209ENST00000553308 ENHOQ6UWT2 76 aa5.84□□□□□ -1.47
SYNE2-209ENST00000553308 OR10G9Q8NGN4 311 aa5.84□□□□□ -1.47
SYNE2-209ENST00000553308 OR2G3Q8NGZ4 309 aa5.84□□□□□ -1.47
SYNE2-209ENST00000553308 CHCHD7Q9BUK0 85 aa5.84□□□□□ -1.47
SYNE2-209ENST00000553308 WFDC1Q9HC57 220 aa5.84□□□□□ -1.47
SYNE2-209ENST00000553308 H3BVH4 76 aa5.83□□□□□ -1.48
SYNE2-209ENST00000553308 K7EQM0 130 aa5.83□□□□□ -1.48
SYNE2-209ENST00000553308 HLA-DQA1P01909 254 aa5.83□□□□□ -1.48
SYNE2-209ENST00000553308 PRSS1P07477 247 aa5.83□□□□□ -1.48
SYNE2-209ENST00000553308 ASIPP42127 132 aa5.83□□□□□ -1.48
SYNE2-209ENST00000553308 H2BFSP57053 126 aa5.83□□□□□ -1.48
SYNE2-209ENST00000553308 Q0VG73 95 aa5.83□□□□□ -1.48
SYNE2-209ENST00000553308 Q6ZRU5 148 aa5.83□□□□□ -1.48
SYNE2-209ENST00000553308 OR10G7Q8NGN6 311 aa5.83□□□□□ -1.48
SYNE2-209ENST00000553308 PPP1R1CQ8WVI7 109 aa5.83□□□□□ -1.48
SYNE2-209ENST00000553308 A0A087WWL8 130 aa5.82□□□□□ -1.48
SYNE2-209ENST00000553308 RHODO00212 210 aa5.82□□□□□ -1.48
SYNE2-209ENST00000553308 CRPP02741 224 aa5.82□□□□□ -1.48
SYNE2-209ENST00000553308 KCNIP4Q6PIL6 250 aa5.82□□□□□ -1.48
SYNE2-209ENST00000553308 C15orf54Q8N8G6 183 aa5.82□□□□□ -1.48
SYNE2-209ENST00000553308 C9orf163Q8N9P6 203 aa5.82□□□□□ -1.48
SYNE2-209ENST00000553308 IL36BQ9NZH7 164 aa5.82□□□□□ -1.48
SYNE2-209ENST00000553308 EPDR1Q9UM22 224 aa5.82□□□□□ -1.48
SYNE2-209ENST00000553308 TRAV34A0A0B4J273 112 aa5.81□□□□□ -1.48
SYNE2-209ENST00000553308 B4DEV8 164 aa5.81□□□□□ -1.48
SYNE2-209ENST00000553308 TMEM262E9PQX1 116 aa5.81□□□□□ -1.48
SYNE2-209ENST00000553308 MPC2O95563 127 aa5.81□□□□□ -1.48
SYNE2-209ENST00000553308 STAG3L2P0CL84 134 aa5.81□□□□□ -1.48
SYNE2-209ENST00000553308 STAG3L3P0CL85 134 aa5.81□□□□□ -1.48
SYNE2-209ENST00000553308 GCHFRP30047 84 aa5.81□□□□□ -1.48
SYNE2-209ENST00000553308 RPL12P30050 165 aaKnown RBP5.81□□□□□ -1.48
SYNE2-209ENST00000553308 CDC34P49427 236 aaPredicted RBP5.81□□□□□ -1.48
SYNE2-209ENST00000553308 UBE2D3P61077 147 aa5.81□□□□□ -1.48
SYNE2-209ENST00000553308 UBE2D2P62837 147 aa5.81□□□□□ -1.48
SYNE2-209ENST00000553308 SUMO1P63165 101 aaKnown RBP5.81□□□□□ -1.48
SYNE2-209ENST00000553308 CYCSP99999 105 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms