RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 ZNF575Q86XF7 245 aa7.99□□□□□ -1.13
LINC00661-206ENST00000552608 C9orf85Q96MD7 179 aa7.99□□□□□ -1.13
LINC00661-206ENST00000552608 AP1S3Q96PC3 154 aa7.99□□□□□ -1.13
LINC00661-206ENST00000552608 MDFIQ99750 246 aa7.99□□□□□ -1.13
LINC00661-206ENST00000552608 SPXQ9BT56 116 aa7.99□□□□□ -1.13
LINC00661-206ENST00000552608 MAST4O15021 2626 aa7.99□□□□□ -1.13
LINC00661-206ENST00000552608 ATRQ13535 2644 aa7.98□□□□□ -1.13
LINC00661-206ENST00000552608 MUC21A0A0G2JKD1 596 aa7.98□□□□□ -1.13
LINC00661-206ENST00000552608 MUC21A0A140T8X8 626 aa7.98□□□□□ -1.13
LINC00661-206ENST00000552608 UBE2CO00762 179 aa7.98□□□□□ -1.13
LINC00661-206ENST00000552608 FRMD6-AS1P0C7T7 363 aa7.98□□□□□ -1.13
LINC00661-206ENST00000552608 SMIM17P0DL12 118 aa7.98□□□□□ -1.13
LINC00661-206ENST00000552608 C1orf158Q8N1D5 194 aa7.98□□□□□ -1.13
LINC00661-206ENST00000552608 TP53TG3Q9ULZ0 132 aa7.98□□□□□ -1.13
LINC00661-206ENST00000552608 HIST1H2BKO60814 126 aa7.97□□□□□ -1.13
LINC00661-206ENST00000552608 HIST1H2BJP06899 126 aa7.97□□□□□ -1.13
LINC00661-206ENST00000552608 HIST1H2BOP23527 126 aa7.97□□□□□ -1.13
LINC00661-206ENST00000552608 HIST1H2BBP33778 126 aa7.97□□□□□ -1.13
LINC00661-206ENST00000552608 HIST1H2BDP58876 126 aa7.97□□□□□ -1.13
LINC00661-206ENST00000552608 HIST1H2BCP62807 126 aa7.97□□□□□ -1.13
LINC00661-206ENST00000552608 SLAQ13239 276 aa7.97□□□□□ -1.13
LINC00661-206ENST00000552608 HIST2H2BEQ16778 126 aa7.97□□□□□ -1.13
LINC00661-206ENST00000552608 RRN3P1Q2M238 152 aa7.97□□□□□ -1.13
LINC00661-206ENST00000552608 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.97□□□□□ -1.13
LINC00661-206ENST00000552608 SAMD5Q5TGI4 173 aa7.97□□□□□ -1.13
LINC00661-206ENST00000552608 FAM104BQ5XKR9 115 aa7.97□□□□□ -1.13
LINC00661-206ENST00000552608 TMEM263Q8WUH6 116 aaKnown RBP7.97□□□□□ -1.13
LINC00661-206ENST00000552608 HIST1H2BHQ93079 126 aa7.97□□□□□ -1.13
LINC00661-206ENST00000552608 C16orf74Q96GX8 76 aa7.97□□□□□ -1.13
LINC00661-206ENST00000552608 RCHY1Q96PM5 261 aa7.97□□□□□ -1.13
LINC00661-206ENST00000552608 HIST1H2BNQ99877 126 aa7.97□□□□□ -1.13
LINC00661-206ENST00000552608 HIST1H2BMQ99879 126 aa7.97□□□□□ -1.13
LINC00661-206ENST00000552608 MDFICQ9P1T7 246 aa7.97□□□□□ -1.13
LINC00661-206ENST00000552608 PHOX2AO14813 284 aa7.96□□□□□ -1.14
LINC00661-206ENST00000552608 NXPH4O95158 308 aa7.96□□□□□ -1.14
LINC00661-206ENST00000552608 PIK3CD-AS1Q5SR53 167 aa7.96□□□□□ -1.14
LINC00661-206ENST00000552608 LCE2DQ5TA82 110 aaPredicted RBP7.96□□□□□ -1.14
LINC00661-206ENST00000552608 DMRTA1Q5VZB9 504 aa7.96□□□□□ -1.14
LINC00661-206ENST00000552608 CSNK1G2-AS1Q8NCQ2 148 aa7.96□□□□□ -1.14
LINC00661-206ENST00000552608 PTH2Q96A98 100 aa7.96□□□□□ -1.14
LINC00661-206ENST00000552608 NDUFAF3Q9BU61 184 aa7.96□□□□□ -1.14
LINC00661-206ENST00000552608 DPH3P1Q9H4G8 78 aa7.96□□□□□ -1.14
LINC00661-206ENST00000552608 SMIM9A6NGZ8 99 aa7.95□□□□□ -1.14
LINC00661-206ENST00000552608 A8MZ25 164 aa7.95□□□□□ -1.14
LINC00661-206ENST00000552608 G3V4G9 280 aa7.95□□□□□ -1.14
LINC00661-206ENST00000552608 M0R2P5 195 aa7.95□□□□□ -1.14
LINC00661-206ENST00000552608 PPBPP02775 128 aa7.95□□□□□ -1.14
LINC00661-206ENST00000552608 GIG44P09565 113 aaPredicted RBP7.95□□□□□ -1.14
LINC00661-206ENST00000552608 IGHV4-30-4P0DP06 118 aa7.95□□□□□ -1.14
LINC00661-206ENST00000552608 SRIP30626 198 aa7.95□□□□□ -1.14
LINC00661-206ENST00000552608 NDUFA6P56556 154 aa7.95□□□□□ -1.14
LINC00661-206ENST00000552608 KRTAP10-11P60412 298 aa7.95□□□□□ -1.14
LINC00661-206ENST00000552608 KIAA1644Q3SXP7 199 aa7.95□□□□□ -1.14
LINC00661-206ENST00000552608 ZNF876PQ49A33 203 aa7.95□□□□□ -1.14
LINC00661-206ENST00000552608 OR10J3Q5JRS4 329 aa7.95□□□□□ -1.14
LINC00661-206ENST00000552608 ZNF705AQ6ZN79 300 aaPredicted RBP7.95□□□□□ -1.14
LINC00661-206ENST00000552608 AMN1Q8IY45 258 aa7.95□□□□□ -1.14
LINC00661-206ENST00000552608 GSN-AS1Q9NRJ2 163 aa7.95□□□□□ -1.14
LINC00661-206ENST00000552608 MSRB1Q9NZV6 116 aa7.95□□□□□ -1.14
LINC00661-206ENST00000552608 A8MWV9 139 aa7.94□□□□□ -1.14
LINC00661-206ENST00000552608 EVI2AP22794 236 aa7.94□□□□□ -1.14
LINC00661-206ENST00000552608 CKS2P33552 79 aa7.94□□□□□ -1.14
LINC00661-206ENST00000552608 MRPL51Q4U2R6 128 aaKnown RBP7.94□□□□□ -1.14
LINC00661-206ENST00000552608 ORMDL3Q8N138 153 aa7.94□□□□□ -1.14
LINC00661-206ENST00000552608 C11orf72Q8NBR9 251 aa7.94□□□□□ -1.14
LINC00661-206ENST00000552608 MUC4Q99102 2169 aa7.93□□□□□ -1.14
LINC00661-206ENST00000552608 MGPP08493 103 aa7.93□□□□□ -1.14
LINC00661-206ENST00000552608 RAB4AP20338 218 aa7.93□□□□□ -1.14
LINC00661-206ENST00000552608 Q0VG73 95 aa7.93□□□□□ -1.14
LINC00661-206ENST00000552608 BAGE3Q86Y29 109 aa7.93□□□□□ -1.14
LINC00661-206ENST00000552608 C14orf178Q8N769 122 aaPredicted RBP7.93□□□□□ -1.14
LINC00661-206ENST00000552608 RNASE8Q8TDE3 154 aaKnown RBP7.93□□□□□ -1.14
LINC00661-206ENST00000552608 MRAP2Q96G30 205 aa7.93□□□□□ -1.14
LINC00661-206ENST00000552608 PRELID3AQ96N28 172 aa7.93□□□□□ -1.14
LINC00661-206ENST00000552608 ALKBH7Q9BT30 221 aaPredicted RBP7.93□□□□□ -1.14
LINC00661-206ENST00000552608 LAMTOR2Q9Y2Q5 125 aa7.93□□□□□ -1.14
LINC00661-206ENST00000552608 NIPBLQ6KC79 2804 aaeCLIP7.92□□□□□ -1.14
LINC00661-206ENST00000552608 D6R8Y8 96 aa7.92□□□□□ -1.14
LINC00661-206ENST00000552608 PPP1R17O96001 155 aa7.92□□□□□ -1.14
LINC00661-206ENST00000552608 AZU1P20160 251 aa7.92□□□□□ -1.14
LINC00661-206ENST00000552608 LGALS9BQ3B8N2 356 aa7.92□□□□□ -1.14
LINC00661-206ENST00000552608 Q6ZWC4 215 aa7.92□□□□□ -1.14
LINC00661-206ENST00000552608 RHODO00212 210 aa7.91□□□□□ -1.14
LINC00661-206ENST00000552608 SPRY2O43597 315 aa7.91□□□□□ -1.14
LINC00661-206ENST00000552608 SNRPEP62304 92 aaKnown RBP7.91□□□□□ -1.14
LINC00661-206ENST00000552608 DAZ2Q13117 558 aaKnown RBP7.91□□□□□ -1.14
LINC00661-206ENST00000552608 DEFB135Q30KP9 77 aa7.91□□□□□ -1.14
LINC00661-206ENST00000552608 KRTAP21-3Q3LHN1 58 aa7.91□□□□□ -1.14
LINC00661-206ENST00000552608 COA6Q5JTJ3 125 aaKnown RBP7.91□□□□□ -1.14
LINC00661-206ENST00000552608 IL17DQ8TAD2 202 aa7.91□□□□□ -1.14
LINC00661-206ENST00000552608 RNF185Q96GF1 192 aa7.91□□□□□ -1.14
LINC00661-206ENST00000552608 U3KQK5 164 aa7.91□□□□□ -1.14
LINC00661-206ENST00000552608 TRGV1A0A0A0MS02 117 aa7.9□□□□□ -1.14
LINC00661-206ENST00000552608 C5orf52A6NGY3 159 aa7.9□□□□□ -1.14
LINC00661-206ENST00000552608 F5H697 171 aa7.9□□□□□ -1.14
LINC00661-206ENST00000552608 CIDEAO60543 219 aa7.9□□□□□ -1.14
LINC00661-206ENST00000552608 MIFP14174 115 aa7.9□□□□□ -1.14
LINC00661-206ENST00000552608 ZNF56Q15929 161 aa7.9□□□□□ -1.14
LINC00661-206ENST00000552608 FAM74A4Q5TZK3 123 aa7.9□□□□□ -1.14
LINC00661-206ENST00000552608 C18orf32Q8TCD1 76 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms