RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 LINC00527Q9UJ94 153 aa4.11□□□□□ -1.75
LIMA1-212ENST00000552491 U3KQE9 123 aa4.11□□□□□ -1.75
LIMA1-212ENST00000552491 HIVEP3Q5T1R4 2406 aa4.11□□□□□ -1.75
LIMA1-212ENST00000552491 ABCA2Q9BZC7 2435 aa4.11□□□□□ -1.75
LIMA1-212ENST00000552491 OR11H12B2RN74 326 aa4.11□□□□□ -1.75
LIMA1-212ENST00000552491 M0R381 172 aa4.11□□□□□ -1.75
LIMA1-212ENST00000552491 CCL21O00585 134 aa4.11□□□□□ -1.75
LIMA1-212ENST00000552491 LGALS1P09382 135 aaKnown RBP4.11□□□□□ -1.75
LIMA1-212ENST00000552491 SLC25A16P16260 332 aa4.11□□□□□ -1.75
LIMA1-212ENST00000552491 NEXN-AS1Q8NBZ9 246 aa4.11□□□□□ -1.75
LIMA1-212ENST00000552491 OR11H1Q8NG94 326 aa4.11□□□□□ -1.75
LIMA1-212ENST00000552491 OR11H2Q8NH07 326 aa4.11□□□□□ -1.75
LIMA1-212ENST00000552491 TOMM6Q96B49 74 aa4.11□□□□□ -1.75
LIMA1-212ENST00000552491 C20orf78Q9BR46 151 aa4.11□□□□□ -1.75
LIMA1-212ENST00000552491 CYSLTR1Q9Y271 337 aa4.11□□□□□ -1.75
LIMA1-212ENST00000552491 LENEPQ9Y5L5 61 aa4.11□□□□□ -1.75
LIMA1-212ENST00000552491 TRBV7-1A0A0A6YYK4 115 aa4.1□□□□□ -1.75
LIMA1-212ENST00000552491 CENPVL3A0A0U1RRI6 287 aa4.1□□□□□ -1.75
LIMA1-212ENST00000552491 HOXA3O43365 443 aaPredicted RBP4.1□□□□□ -1.75
LIMA1-212ENST00000552491 TRBV12-3P01733 135 aa4.1□□□□□ -1.75
LIMA1-212ENST00000552491 ADORA2A-AS1P86434 159 aa4.1□□□□□ -1.75
LIMA1-212ENST00000552491 ZFAND2AQ8N6M9 145 aa4.1□□□□□ -1.75
LIMA1-212ENST00000552491 C14orf178Q8N769 122 aaPredicted RBP4.1□□□□□ -1.75
LIMA1-212ENST00000552491 EEF1AKMT3Q96AZ1 226 aa4.1□□□□□ -1.75
LIMA1-212ENST00000552491 PLEKHB2Q96CS7 222 aa4.1□□□□□ -1.75
LIMA1-212ENST00000552491 SCGB3A1Q96QR1 104 aa4.1□□□□□ -1.75
LIMA1-212ENST00000552491 SPATA25Q9BR10 227 aa4.1□□□□□ -1.75
LIMA1-212ENST00000552491 SAA4P35542 130 aa4.1□□□□□ -1.75
LIMA1-212ENST00000552491 SUMO2P61956 95 aaKnown RBP4.1□□□□□ -1.75
LIMA1-212ENST00000552491 ATP5G2Q06055 141 aa4.1□□□□□ -1.75
LIMA1-212ENST00000552491 UNQ9165/PRO28630Q6UXU0 137 aa4.1□□□□□ -1.75
LIMA1-212ENST00000552491 GLMPQ8WWB7 406 aa4.1□□□□□ -1.75
LIMA1-212ENST00000552491 ITLN2Q8WWU7 325 aaPredicted RBP4.1□□□□□ -1.75
LIMA1-212ENST00000552491 BAALCQ8WXS3 180 aa4.1□□□□□ -1.75
LIMA1-212ENST00000552491 C16orf92Q96LL3 132 aa4.1□□□□□ -1.75
LIMA1-212ENST00000552491 F6UB75 175 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 CRYGDP07320 174 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 UBE2E1P51965 193 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 SFTA2Q6UW10 78 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 TMEM219Q86XT9 240 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 KLHL30-AS1Q8NEE0 82 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 LINC00477Q96M19 166 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 PRADC1Q9BSG0 188 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 RAXQ9Y2V3 346 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 MAP1AP78559 2803 aaPredicted RBP4.09□□□□□ -1.75
LIMA1-212ENST00000552491 ADARB2-AS1A8MUL3 147 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 K7ENP7 123 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 GNRH2O43555 120 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 TSHBP01222 138 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 COX6B1P14854 86 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 EMP1P54849 157 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 ANXA2RQ3ZCQ2 193 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 C2orf66Q6UXQ4 117 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 C9orf139Q6ZV77 190 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 ATP6V0BQ99437 205 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 DPH3P1Q9H4G8 78 aa4.09□□□□□ -1.75
LIMA1-212ENST00000552491 TRAV21A0A0B4J279 112 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 TMEM238LA0A1B0GVL6 79 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 A6NJY4 79 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 NDUFS8O00217 210 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 SOCS3O14543 225 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 DUSP14O95147 198 aaKnown RBP4.08□□□□□ -1.76
LIMA1-212ENST00000552491 MGPP08493 103 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 RNASE3P12724 160 aaKnown RBP4.08□□□□□ -1.76
LIMA1-212ENST00000552491 CLEC2AQ6UVW9 174 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 ZFP2Q6ZN57 461 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 C5orf56Q8N8D9 126 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 SORL1Q92673 2214 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 IGHV3OR16-10A0A075B7F0 116 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 LINC01549A6NIU2 74 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 ZNF815PA8K554 130 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 PPP1R17O96001 155 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 MED14OSP0DP75 135 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 S100A4P26447 101 aaKnown RBP4.08□□□□□ -1.76
LIMA1-212ENST00000552491 ASIPP42127 132 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 LINC00315P59091 139 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 SCGB2A2Q13296 93 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 FHL3Q13643 280 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 C19orf54Q5BKX5 351 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 JPT2Q9H910 190 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 PHLDA3Q9Y5J5 127 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 NCOR2Q9Y618 2525 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 IGKV3-7A0A075B6H7 116 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 IGLV4-69A0A075B6H9 119 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 C11orf86A6NJI1 115 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 OVOL1O14753 267 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 EDN2P20800 178 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 UBE2D1P51668 147 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 TSPEAR-AS2P59090 65 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 CRYBG3Q68DQ2 2970 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 NFE4Q86UQ8 179 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 OR10J6PQ8NGY7 276 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 ATP6V0E2Q8NHE4 81 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 PTH2Q96A98 100 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 FAM19A4Q96LR4 140 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 MRPL16Q9NX20 251 aaKnown RBP4.08□□□□□ -1.76
LIMA1-212ENST00000552491 KIF25-AS1Q9Y6Z4 181 aa4.08□□□□□ -1.76
LIMA1-212ENST00000552491 A0A1B0GV72 72 aa4.07□□□□□ -1.76
LIMA1-212ENST00000552491 APOMO95445 188 aa4.07□□□□□ -1.76
LIMA1-212ENST00000552491 TSPAN13O95857 204 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms