RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 FFAR4Q5NUL3 377 aa10.98□□□□□ -0.65
CACNB3-222ENST00000552465 CYB561D1Q8N8Q1 229 aa10.98□□□□□ -0.65
CACNB3-222ENST00000552465 Q9UF83 564 aa10.98□□□□□ -0.65
CACNB3-222ENST00000552465 TAAR5O14804 337 aa10.97□□□□□ -0.65
CACNB3-222ENST00000552465 H2AFB2P0C5Z0 115 aa10.97□□□□□ -0.65
CACNB3-222ENST00000552465 SEC11BP0C7V7 166 aa10.97□□□□□ -0.65
CACNB3-222ENST00000552465 ZFP2Q6ZN57 461 aa10.97□□□□□ -0.65
CACNB3-222ENST00000552465 SGK494Q96LW2 274 aa10.97□□□□□ -0.65
CACNB3-222ENST00000552465 RBM38Q9H0Z9 239 aaKnown RBP10.97□□□□□ -0.65
CACNB3-222ENST00000552465 URGCP-MRPS24S4R325 110 aa10.97□□□□□ -0.65
CACNB3-222ENST00000552465 MT1HL1P0DM35 61 aa10.96□□□□□ -0.65
CACNB3-222ENST00000552465 RNASE3P12724 160 aaKnown RBP10.96□□□□□ -0.65
CACNB3-222ENST00000552465 GNG5P63218 68 aa10.96□□□□□ -0.65
CACNB3-222ENST00000552465 NIT1Q86X76 327 aa10.96□□□□□ -0.65
CACNB3-222ENST00000552465 OR2T35Q8NGX2 323 aa10.96□□□□□ -0.65
CACNB3-222ENST00000552465 SAMD10Q9BYL1 202 aa10.96□□□□□ -0.65
CACNB3-222ENST00000552465 PARLQ9H300 379 aa10.96□□□□□ -0.65
CACNB3-222ENST00000552465 OR5AC2Q9NZP5 309 aa10.96□□□□□ -0.65
CACNB3-222ENST00000552465 KLK12Q9UKR0 248 aa10.96□□□□□ -0.65
CACNB3-222ENST00000552465 FGF8P55075 233 aaPredicted RBP10.95□□□□□ -0.66
CACNB3-222ENST00000552465 TMEM75Q8N9X5 138 aa10.95□□□□□ -0.66
CACNB3-222ENST00000552465 LINC00479Q96M42 142 aa10.95□□□□□ -0.66
CACNB3-222ENST00000552465 NDFIP1Q9BT67 221 aa10.95□□□□□ -0.66
CACNB3-222ENST00000552465 A8MWV9 139 aa10.94□□□□□ -0.66
CACNB3-222ENST00000552465 H0YIZ8 118 aa10.94□□□□□ -0.66
CACNB3-222ENST00000552465 UBE2WQ96B02 151 aa10.94□□□□□ -0.66
CACNB3-222ENST00000552465 SIX6O95475 246 aa10.93□□□□□ -0.66
CACNB3-222ENST00000552465 GCGP01275 180 aa10.93□□□□□ -0.66
CACNB3-222ENST00000552465 ATRAIDQ6UW56 229 aa10.93□□□□□ -0.66
CACNB3-222ENST00000552465 PQLC2Q6ZP29 291 aa10.93□□□□□ -0.66
CACNB3-222ENST00000552465 C14orf178Q8N769 122 aaPredicted RBP10.93□□□□□ -0.66
CACNB3-222ENST00000552465 ELOBQ15370 118 aa10.92□□□□□ -0.66
CACNB3-222ENST00000552465 LGALSLQ3ZCW2 172 aaPredicted RBP10.92□□□□□ -0.66
CACNB3-222ENST00000552465 LRRC37A5PQ49AS3 106 aa10.92□□□□□ -0.66
CACNB3-222ENST00000552465 C14orf177Q52M58 125 aa10.92□□□□□ -0.66
CACNB3-222ENST00000552465 PIK3CD-AS1Q5SR53 167 aa10.92□□□□□ -0.66
CACNB3-222ENST00000552465 UFSP1Q6NVU6 142 aa10.92□□□□□ -0.66
CACNB3-222ENST00000552465 OR10G9Q8NGN4 311 aa10.92□□□□□ -0.66
CACNB3-222ENST00000552465 SERTM2A0A1B0GWG4 89 aa10.91□□□□□ -0.66
CACNB3-222ENST00000552465 SCGB1C1Q8TD33 95 aa10.91□□□□□ -0.66
CACNB3-222ENST00000552465 JPT2Q9H910 190 aa10.91□□□□□ -0.66
CACNB3-222ENST00000552465 PSG8Q9UQ74 426 aa10.91□□□□□ -0.66
CACNB3-222ENST00000552465 A0A087WX48 190 aa10.9□□□□□ -0.66
CACNB3-222ENST00000552465 TCRAP04437 139 aa10.9□□□□□ -0.66
CACNB3-222ENST00000552465 Q0VG73 95 aa10.9□□□□□ -0.66
CACNB3-222ENST00000552465 SMUG1Q53HV7 270 aa10.9□□□□□ -0.66
CACNB3-222ENST00000552465 CHCHD7Q9BUK0 85 aa10.9□□□□□ -0.66
CACNB3-222ENST00000552465 PKHD1L1Q86WI1 4243 aa10.9□□□□□ -0.66
CACNB3-222ENST00000552465 A0A1W2PPV4 95 aa10.89□□□□□ -0.67
CACNB3-222ENST00000552465 HSPB11Q9Y547 144 aa10.89□□□□□ -0.67
CACNB3-222ENST00000552465 IGKV3D-20A0A0C4DH25 116 aa10.88□□□□□ -0.67
CACNB3-222ENST00000552465 FAM240BA0A1B0GVZ2 78 aa10.88□□□□□ -0.67
CACNB3-222ENST00000552465 K7EQM0 130 aa10.88□□□□□ -0.67
CACNB3-222ENST00000552465 HMGB3O15347 200 aaKnown RBP10.88□□□□□ -0.67
CACNB3-222ENST00000552465 S100A4P26447 101 aaKnown RBP10.88□□□□□ -0.67
CACNB3-222ENST00000552465 DMRTA1Q5VZB9 504 aa10.88□□□□□ -0.67
CACNB3-222ENST00000552465 Q6ZRU5 148 aa10.88□□□□□ -0.67
CACNB3-222ENST00000552465 C5orf17Q8NAS9 161 aa10.88□□□□□ -0.67
CACNB3-222ENST00000552465 SMIM3Q9BZL3 60 aa10.88□□□□□ -0.67
CACNB3-222ENST00000552465 RAB2AP61019 212 aa10.87□□□□□ -0.67
CACNB3-222ENST00000552465 CYCSP99999 105 aaKnown RBP10.87□□□□□ -0.67
CACNB3-222ENST00000552465 FLI1Q01543 452 aaPredicted RBP10.87□□□□□ -0.67
CACNB3-222ENST00000552465 ZFP69Q49AA0 526 aa10.87□□□□□ -0.67
CACNB3-222ENST00000552465 KCNIP4Q6PIL6 250 aa10.87□□□□□ -0.67
CACNB3-222ENST00000552465 PRNTQ86SH4 94 aa10.87□□□□□ -0.67
CACNB3-222ENST00000552465 C1orf43Q9BWL3 253 aa10.87□□□□□ -0.67
CACNB3-222ENST00000552465 ASIPP42127 132 aa10.86□□□□□ -0.67
CACNB3-222ENST00000552465 ENHOQ6UWT2 76 aa10.86□□□□□ -0.67
CACNB3-222ENST00000552465 OR10G7Q8NGN6 311 aa10.86□□□□□ -0.67
CACNB3-222ENST00000552465 OR2G3Q8NGZ4 309 aa10.86□□□□□ -0.67
CACNB3-222ENST00000552465 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.86□□□□□ -0.67
CACNB3-222ENST00000552465 USP17L23D6RBM5 183 aa10.85□□□□□ -0.67
CACNB3-222ENST00000552465 RHODO00212 210 aa10.85□□□□□ -0.67
CACNB3-222ENST00000552465 PRSS1P07477 247 aa10.85□□□□□ -0.67
CACNB3-222ENST00000552465 ARL14EPLP0DKL9 152 aa10.85□□□□□ -0.67
CACNB3-222ENST00000552465 SAPCD1Q5SSQ6 148 aa10.85□□□□□ -0.67
CACNB3-222ENST00000552465 DGAT2L7PQ6IED9 249 aa10.85□□□□□ -0.67
CACNB3-222ENST00000552465 C9orf163Q8N9P6 203 aa10.85□□□□□ -0.67
CACNB3-222ENST00000552465 IL36BQ9NZH7 164 aa10.85□□□□□ -0.67
CACNB3-222ENST00000552465 PPP1R1CQ8WVI7 109 aa10.84□□□□□ -0.67
CACNB3-222ENST00000552465 WFDC1Q9HC57 220 aa10.84□□□□□ -0.67
CACNB3-222ENST00000552465 EPDR1Q9UM22 224 aa10.84□□□□□ -0.67
CACNB3-222ENST00000552465 TMEM262E9PQX1 116 aa10.83□□□□□ -0.68
CACNB3-222ENST00000552465 PANO1I0J062 215 aa10.83□□□□□ -0.68
CACNB3-222ENST00000552465 RPL12P30050 165 aaKnown RBP10.83□□□□□ -0.68
CACNB3-222ENST00000552465 SUMO1P63165 101 aaKnown RBP10.83□□□□□ -0.68
CACNB3-222ENST00000552465 FAM74A4Q5TZK3 123 aa10.83□□□□□ -0.68
CACNB3-222ENST00000552465 SUN5Q8TC36 379 aa10.83□□□□□ -0.68
CACNB3-222ENST00000552465 CCDC32Q9BV29 185 aa10.83□□□□□ -0.68
CACNB3-222ENST00000552465 A0A0D9SG52 128 aa10.82□□□□□ -0.68
CACNB3-222ENST00000552465 FABP5P3A8MUU1 101 aa10.82□□□□□ -0.68
CACNB3-222ENST00000552465 STAG3L2P0CL84 134 aa10.82□□□□□ -0.68
CACNB3-222ENST00000552465 STAG3L3P0CL85 134 aa10.82□□□□□ -0.68
CACNB3-222ENST00000552465 H2BFSP57053 126 aa10.82□□□□□ -0.68
CACNB3-222ENST00000552465 UBE2D3P61077 147 aa10.82□□□□□ -0.68
CACNB3-222ENST00000552465 UBE2D2P62837 147 aa10.82□□□□□ -0.68
CACNB3-222ENST00000552465 MZT2BQ6NZ67 158 aa10.82□□□□□ -0.68
CACNB3-222ENST00000552465 SDIM1Q6ZPB5 146 aa10.82□□□□□ -0.68
CACNB3-222ENST00000552465 C15orf54Q8N8G6 183 aa10.82□□□□□ -0.68
CACNB3-222ENST00000552465 A0A087WWL8 130 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms