RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 ST20Q9HBF5 79 aa10.45□□□□□ -0.74
RAB3IP-216ENST00000552199 ESM1Q9NQ30 184 aa10.45□□□□□ -0.74
RAB3IP-216ENST00000552199 PEMTQ9UBM1 199 aa10.45□□□□□ -0.74
RAB3IP-216ENST00000552199 TLN2Q9Y4G6 2542 aa10.44□□□□□ -0.74
RAB3IP-216ENST00000552199 hDV102S1A0JD36 115 aa10.44□□□□□ -0.74
RAB3IP-216ENST00000552199 IGKV3-20P01619 116 aa10.44□□□□□ -0.74
RAB3IP-216ENST00000552199 FCER1GP30273 86 aa10.44□□□□□ -0.74
RAB3IP-216ENST00000552199 KHDC1LQ5JSQ8 128 aa10.44□□□□□ -0.74
RAB3IP-216ENST00000552199 Q6ZN92 141 aa10.44□□□□□ -0.74
RAB3IP-216ENST00000552199 OR9G4Q8NGQ1 327 aa10.44□□□□□ -0.74
RAB3IP-216ENST00000552199 DPH3P1Q9H4G8 78 aa10.44□□□□□ -0.74
RAB3IP-216ENST00000552199 YAE1D1Q9NRH1 226 aa10.44□□□□□ -0.74
RAB3IP-216ENST00000552199 FLNAP21333 2647 aaKnown RBP10.44□□□□□ -0.74
RAB3IP-216ENST00000552199 A0A1B0GV90 55 aa10.43□□□□□ -0.74
RAB3IP-216ENST00000552199 NXPH4O95158 308 aa10.43□□□□□ -0.74
RAB3IP-216ENST00000552199 FOXI2Q6ZQN5 318 aa10.43□□□□□ -0.74
RAB3IP-216ENST00000552199 KLHL30-AS1Q8NEE0 82 aa10.43□□□□□ -0.74
RAB3IP-216ENST00000552199 DUX3Q96PT4 197 aa10.43□□□□□ -0.74
RAB3IP-216ENST00000552199 PMCHL2Q9BQD1 86 aa10.43□□□□□ -0.74
RAB3IP-216ENST00000552199 HECTD1Q9ULT8 2610 aa10.43□□□□□ -0.74
RAB3IP-216ENST00000552199 ITPR2Q14571 2701 aa10.43□□□□□ -0.74
RAB3IP-216ENST00000552199 HSBP1L1C9JCN9 74 aa10.43□□□□□ -0.74
RAB3IP-216ENST00000552199 TSPOP30536 169 aa10.43□□□□□ -0.74
RAB3IP-216ENST00000552199 C14orf178Q8N769 122 aaPredicted RBP10.43□□□□□ -0.74
RAB3IP-216ENST00000552199 DLX4Q92988 240 aaPredicted RBP10.43□□□□□ -0.74
RAB3IP-216ENST00000552199 IFI27L1Q96BM0 104 aa10.43□□□□□ -0.74
RAB3IP-216ENST00000552199 CCDC168Q8NDH2 2452 aa10.42□□□□□ -0.74
RAB3IP-216ENST00000552199 CDKN1BP46527 198 aa10.42□□□□□ -0.74
RAB3IP-216ENST00000552199 HNRNPA3P51991 378 aaKnown RBP10.42□□□□□ -0.74
RAB3IP-216ENST00000552199 LGALS9BQ3B8N2 356 aa10.42□□□□□ -0.74
RAB3IP-216ENST00000552199 LGALS9CQ6DKI2 356 aa10.42□□□□□ -0.74
RAB3IP-216ENST00000552199 MUC4Q99102 2169 aa10.42□□□□□ -0.74
RAB3IP-216ENST00000552199 TRAV12-2A0A075B6T6 113 aa10.41□□□□□ -0.74
RAB3IP-216ENST00000552199 TRAV2A0A0B4J234 112 aa10.41□□□□□ -0.74
RAB3IP-216ENST00000552199 CD7P09564 240 aa10.41□□□□□ -0.74
RAB3IP-216ENST00000552199 AMTNQ6UX39 209 aa10.41□□□□□ -0.74
RAB3IP-216ENST00000552199 AP1S3Q96PC3 154 aa10.41□□□□□ -0.74
RAB3IP-216ENST00000552199 AGRNO00468 2067 aa10.41□□□□□ -0.74
RAB3IP-216ENST00000552199 SONP18583 2426 aaKnown RBP10.41□□□□□ -0.74
RAB3IP-216ENST00000552199 SPINK13Q1W4C9 94 aa10.41□□□□□ -0.74
RAB3IP-216ENST00000552199 HIST2H2BDQ6DRA6 164 aa10.41□□□□□ -0.74
RAB3IP-216ENST00000552199 MYO9AB2RTY4 2548 aa10.4□□□□□ -0.74
RAB3IP-216ENST00000552199 POM121L12Q8N7R1 296 aa10.4□□□□□ -0.74
RAB3IP-216ENST00000552199 TMEM158Q8WZ71 300 aa10.4□□□□□ -0.74
RAB3IP-216ENST00000552199 RASL10AQ92737 203 aa10.4□□□□□ -0.74
RAB3IP-216ENST00000552199 MRPS16Q9Y3D3 137 aaKnown RBP10.4□□□□□ -0.74
RAB3IP-216ENST00000552199 GOLT1BQ9Y3E0 138 aa10.4□□□□□ -0.74
RAB3IP-216ENST00000552199 IGHV3-16A0A0C4DH30 117 aa10.39□□□□□ -0.75
RAB3IP-216ENST00000552199 MGPP08493 103 aa10.39□□□□□ -0.75
RAB3IP-216ENST00000552199 DEFB131AP59861 70 aa10.39□□□□□ -0.75
RAB3IP-216ENST00000552199 LAGE3Q14657 143 aa10.39□□□□□ -0.75
RAB3IP-216ENST00000552199 TMEM61Q8N0U2 210 aa10.39□□□□□ -0.75
RAB3IP-216ENST00000552199 KIF25-AS1Q9Y6Z4 181 aa10.39□□□□□ -0.75
RAB3IP-216ENST00000552199 UNC79Q9P2D8 2635 aa10.39□□□□□ -0.75
RAB3IP-216ENST00000552199 AKAP9Q99996 3911 aa10.39□□□□□ -0.75
RAB3IP-216ENST00000552199 IGHV1OR15-1A0A075B7D0 117 aa10.39□□□□□ -0.75
RAB3IP-216ENST00000552199 KNCNA6PVL3 124 aa10.39□□□□□ -0.75
RAB3IP-216ENST00000552199 C9orf85Q96MD7 179 aa10.39□□□□□ -0.75
RAB3IP-216ENST00000552199 C18orf15Q96N68 181 aa10.39□□□□□ -0.75
RAB3IP-216ENST00000552199 C20orf78Q9BR46 151 aa10.39□□□□□ -0.75
RAB3IP-216ENST00000552199 SMIM2Q9BVW6 85 aa10.39□□□□□ -0.75
RAB3IP-216ENST00000552199 SORL1Q92673 2214 aa10.38□□□□□ -0.75
RAB3IP-216ENST00000552199 A8MTW9 85 aa10.38□□□□□ -0.75
RAB3IP-216ENST00000552199 TCAPO15273 167 aa10.38□□□□□ -0.75
RAB3IP-216ENST00000552199 LINC00315P59091 139 aa10.38□□□□□ -0.75
RAB3IP-216ENST00000552199 NUTF2P61970 127 aaKnown RBP10.38□□□□□ -0.75
RAB3IP-216ENST00000552199 DEFB114Q30KQ6 69 aa10.38□□□□□ -0.75
RAB3IP-216ENST00000552199 DYNLRB2Q8TF09 96 aa10.38□□□□□ -0.75
RAB3IP-216ENST00000552199 RAX2Q96IS3 184 aa10.38□□□□□ -0.75
RAB3IP-216ENST00000552199 RNASE1P07998 156 aaKnown RBP10.37□□□□□ -0.75
RAB3IP-216ENST00000552199 HLA-DRB4P13762 266 aa10.37□□□□□ -0.75
RAB3IP-216ENST00000552199 SUMO2P61956 95 aaKnown RBP10.37□□□□□ -0.75
RAB3IP-216ENST00000552199 RPL39LQ96EH5 51 aaKnown RBP10.37□□□□□ -0.75
RAB3IP-216ENST00000552199 MDFICQ9P1T7 246 aa10.37□□□□□ -0.75
RAB3IP-216ENST00000552199 HLA-DRB4X5D2U9 266 aa10.37□□□□□ -0.75
RAB3IP-216ENST00000552199 SMIM17P0DL12 118 aa10.37□□□□□ -0.75
RAB3IP-216ENST00000552199 CD28P10747 220 aa10.37□□□□□ -0.75
RAB3IP-216ENST00000552199 BATFQ16520 125 aa10.37□□□□□ -0.75
RAB3IP-216ENST00000552199 SLC25A34Q6PIV7 304 aa10.37□□□□□ -0.75
RAB3IP-216ENST00000552199 Q8N1Y9 231 aa10.37□□□□□ -0.75
RAB3IP-216ENST00000552199 C16orf95Q9H693 158 aa10.37□□□□□ -0.75
RAB3IP-216ENST00000552199 H3BMM0 161 aa10.36□□□□□ -0.75
RAB3IP-216ENST00000552199 PPP1R17O96001 155 aa10.36□□□□□ -0.75
RAB3IP-216ENST00000552199 SCGB2A2Q13296 93 aa10.36□□□□□ -0.75
RAB3IP-216ENST00000552199 C11orf44Q8N8P7 122 aa10.36□□□□□ -0.75
RAB3IP-216ENST00000552199 JPT2Q9H910 190 aa10.36□□□□□ -0.75
RAB3IP-216ENST00000552199 FHL3Q13643 280 aa10.35□□□□□ -0.75
RAB3IP-216ENST00000552199 A0A1W2PRX2 142 aa10.35□□□□□ -0.75
RAB3IP-216ENST00000552199 ATP5LO75964 103 aa10.35□□□□□ -0.75
RAB3IP-216ENST00000552199 CD300EQ496F6 205 aaPredicted RBP10.35□□□□□ -0.75
RAB3IP-216ENST00000552199 SYT8Q8NBV8 401 aa10.35□□□□□ -0.75
RAB3IP-216ENST00000552199 LINC01006Q8NI28 216 aa10.35□□□□□ -0.75
RAB3IP-216ENST00000552199 MAP6D1Q9H9H5 199 aa10.35□□□□□ -0.75
RAB3IP-216ENST00000552199 DKK2Q9UBU2 259 aa10.35□□□□□ -0.75
RAB3IP-216ENST00000552199 K7EMI3 77 aa10.34□□□□□ -0.75
RAB3IP-216ENST00000552199 CCL24O00175 119 aa10.34□□□□□ -0.75
RAB3IP-216ENST00000552199 PRSS1P07477 247 aa10.34□□□□□ -0.75
RAB3IP-216ENST00000552199 ODF1Q14990 250 aa10.34□□□□□ -0.75
RAB3IP-216ENST00000552199 ZNF124Q15973 351 aa10.34□□□□□ -0.75
RAB3IP-216ENST00000552199 ORMDL2Q53FV1 153 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms