RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 RPL39LQ96EH5 51 aaKnown RBP17.88■□□□□ 0.45
NPAS3-211ENST00000551634 AGRNO00468 2067 aa17.87■□□□□ 0.45
NPAS3-211ENST00000551634 RRN3P1Q2M238 152 aa17.87■□□□□ 0.45
NPAS3-211ENST00000551634 RNF223E7ERA6 249 aa17.87■□□□□ 0.45
NPAS3-211ENST00000551634 POM121L12Q8N7R1 296 aa17.87■□□□□ 0.45
NPAS3-211ENST00000551634 BAALCQ8WXS3 180 aa17.87■□□□□ 0.45
NPAS3-211ENST00000551634 LINC00527Q9UJ94 153 aa17.87■□□□□ 0.45
NPAS3-211ENST00000551634 USMG5Q96IX5 58 aa17.86■□□□□ 0.45
NPAS3-211ENST00000551634 H3BUA1 57 aa17.86■□□□□ 0.45
NPAS3-211ENST00000551634 TMEM238C9JI98 176 aa17.85■□□□□ 0.45
NPAS3-211ENST00000551634 FASNP49327 2511 aaKnown RBP17.85■□□□□ 0.45
NPAS3-211ENST00000551634 CRYBG3Q68DQ2 2970 aa17.85■□□□□ 0.45
NPAS3-211ENST00000551634 LINC01549A6NIU2 74 aa17.85■□□□□ 0.45
NPAS3-211ENST00000551634 TRBV12-3P01733 135 aa17.85■□□□□ 0.45
NPAS3-211ENST00000551634 MGPP08493 103 aa17.84■□□□□ 0.45
NPAS3-211ENST00000551634 RPL32P62910 135 aaKnown RBP17.84■□□□□ 0.45
NPAS3-211ENST00000551634 PRSS29PA6NIE9 313 aa17.84■□□□□ 0.45
NPAS3-211ENST00000551634 J3QR89 54 aa17.84■□□□□ 0.45
NPAS3-211ENST00000551634 NXPH4O95158 308 aa17.84■□□□□ 0.45
NPAS3-211ENST00000551634 LGALS1P09382 135 aaKnown RBP17.84■□□□□ 0.45
NPAS3-211ENST00000551634 SPANXB1Q9NS25 103 aaPredicted RBP17.84■□□□□ 0.45
NPAS3-211ENST00000551634 IGHV1-69DA0A0B4J2H0 117 aa17.83■□□□□ 0.45
NPAS3-211ENST00000551634 IGHV1-69P01742 117 aa17.83■□□□□ 0.45
NPAS3-211ENST00000551634 RNASE3P12724 160 aaKnown RBP17.83■□□□□ 0.45
NPAS3-211ENST00000551634 RNASE4P34096 147 aaKnown RBP17.83■□□□□ 0.45
NPAS3-211ENST00000551634 FAM208BQ5VWN6 2430 aa17.82■□□□□ 0.44
NPAS3-211ENST00000551634 SPRY2O43597 315 aa17.82■□□□□ 0.44
NPAS3-211ENST00000551634 WFDC2Q14508 124 aa17.82■□□□□ 0.44
NPAS3-211ENST00000551634 PRADC1Q9BSG0 188 aa17.82■□□□□ 0.44
NPAS3-211ENST00000551634 IGHV4OR15-8A0A075B7B6 117 aa17.81■□□□□ 0.44
NPAS3-211ENST00000551634 A0A087WW49 117 aa17.81■□□□□ 0.44
NPAS3-211ENST00000551634 H3BMG7 143 aa17.81■□□□□ 0.44
NPAS3-211ENST00000551634 GNRH2O43555 120 aa17.81■□□□□ 0.44
NPAS3-211ENST00000551634 HOXA3O43365 443 aaPredicted RBP17.8■□□□□ 0.44
NPAS3-211ENST00000551634 CYSLTR1Q9Y271 337 aa17.8■□□□□ 0.44
NPAS3-211ENST00000551634 PAPPA-AS1Q5QFB9 102 aa17.8■□□□□ 0.44
NPAS3-211ENST00000551634 TMEM238LA0A1B0GVL6 79 aa17.79■□□□□ 0.44
NPAS3-211ENST00000551634 A6NJY4 79 aa17.79■□□□□ 0.44
NPAS3-211ENST00000551634 IGHG2P01859 326 aa17.79■□□□□ 0.44
NPAS3-211ENST00000551634 DEFB1P60022 68 aa17.79■□□□□ 0.44
NPAS3-211ENST00000551634 SCGB2A2Q13296 93 aa17.79■□□□□ 0.44
NPAS3-211ENST00000551634 GAGE13Q4V321 117 aa17.79■□□□□ 0.44
NPAS3-211ENST00000551634 KIF25-AS1Q9Y6Z4 181 aa17.79■□□□□ 0.44
NPAS3-211ENST00000551634 RPL11P62913 178 aaKnown RBP17.79■□□□□ 0.44
NPAS3-211ENST00000551634 LY6DQ14210 128 aa17.79■□□□□ 0.44
NPAS3-211ENST00000551634 ZNF815PA8K554 130 aa17.78■□□□□ 0.44
NPAS3-211ENST00000551634 IGHV3OR16-10A0A075B7F0 116 aa17.78■□□□□ 0.44
NPAS3-211ENST00000551634 COX6B1P14854 86 aa17.78■□□□□ 0.44
NPAS3-211ENST00000551634 LINC00315P59091 139 aa17.78■□□□□ 0.44
NPAS3-211ENST00000551634 SPTBN1Q01082 2364 aaKnown RBP17.77■□□□□ 0.44
NPAS3-211ENST00000551634 F6UB75 175 aa17.77■□□□□ 0.44
NPAS3-211ENST00000551634 RHPN1-AS1Q9BWJ2 59 aa17.77■□□□□ 0.44
NPAS3-211ENST00000551634 PRO0461Q9UI25 63 aa17.77■□□□□ 0.44
NPAS3-211ENST00000551634 CD300EQ496F6 205 aaPredicted RBP17.77■□□□□ 0.43
NPAS3-211ENST00000551634 MORN3Q6PF18 240 aaPredicted RBP17.77■□□□□ 0.43
NPAS3-211ENST00000551634 MAP1AP78559 2803 aaPredicted RBP17.76■□□□□ 0.43
NPAS3-211ENST00000551634 KLLNB2CW77 178 aa17.76■□□□□ 0.43
NPAS3-211ENST00000551634 BRD3OSQ6XYD6 125 aa17.76■□□□□ 0.43
NPAS3-211ENST00000551634 CRYGDP07320 174 aa17.75■□□□□ 0.43
NPAS3-211ENST00000551634 SCGB1A1P11684 91 aa17.75■□□□□ 0.43
NPAS3-211ENST00000551634 AMTNQ6UX39 209 aa17.75■□□□□ 0.43
NPAS3-211ENST00000551634 KMT2BQ9UMN6 2715 aaPredicted RBP17.75■□□□□ 0.43
NPAS3-211ENST00000551634 DUSP14O95147 198 aaKnown RBP17.75■□□□□ 0.43
NPAS3-211ENST00000551634 IGHV3-11P01762 117 aa17.75■□□□□ 0.43
NPAS3-211ENST00000551634 POLR2KP53803 58 aaKnown RBP17.75■□□□□ 0.43
NPAS3-211ENST00000551634 SIGMAR1Q99720 223 aa17.75■□□□□ 0.43
NPAS3-211ENST00000551634 ETDBQ3ZM63 59 aa17.74■□□□□ 0.43
NPAS3-211ENST00000551634 SAMD13Q5VXD3 122 aa17.74■□□□□ 0.43
NPAS3-211ENST00000551634 SCGB1D4Q6XE38 83 aa17.74■□□□□ 0.43
NPAS3-211ENST00000551634 CSMD2Q7Z408 3487 aa17.74■□□□□ 0.43
NPAS3-211ENST00000551634 HERVK_113P61574 105 aa17.74■□□□□ 0.43
NPAS3-211ENST00000551634 DAZ1Q9NQZ3 744 aaKnown RBP17.74■□□□□ 0.43
NPAS3-211ENST00000551634 HELZ2Q9BYK8 2649 aaKnown RBP17.74■□□□□ 0.43
NPAS3-211ENST00000551634 IGIPA6NJ69 53 aa17.73■□□□□ 0.43
NPAS3-211ENST00000551634 PRB1P04280 392 aa17.73■□□□□ 0.43
NPAS3-211ENST00000551634 UBE2D1P51668 147 aa17.73■□□□□ 0.43
NPAS3-211ENST00000551634 FAM159AQ6UWV7 190 aa17.73■□□□□ 0.43
NPAS3-211ENST00000551634 TMEM141Q96I45 108 aa17.73■□□□□ 0.43
NPAS3-211ENST00000551634 IGHV4-39P01824 125 aa17.73■□□□□ 0.43
NPAS3-211ENST00000551634 PF4V1P10720 104 aa17.73■□□□□ 0.43
NPAS3-211ENST00000551634 PGPEP1Q9NXJ5 209 aa17.73■□□□□ 0.43
NPAS3-211ENST00000551634 A6NDX4 124 aa17.72■□□□□ 0.43
NPAS3-211ENST00000551634 VCYO14598 125 aa17.72■□□□□ 0.43
NPAS3-211ENST00000551634 PMVKQ15126 192 aa17.72■□□□□ 0.43
NPAS3-211ENST00000551634 ZFP2Q6ZN57 461 aa17.72■□□□□ 0.43
NPAS3-211ENST00000551634 TP53TG1Q9Y2A0 90 aa17.72■□□□□ 0.43
NPAS3-211ENST00000551634 GAGE12HA6NDE8 117 aa17.72■□□□□ 0.43
NPAS3-211ENST00000551634 TSHBP01222 138 aa17.72■□□□□ 0.43
NPAS3-211ENST00000551634 SH2D6Q7Z4S9 175 aa17.72■□□□□ 0.43
NPAS3-211ENST00000551634 LRRK2Q5S007 2527 aa17.71■□□□□ 0.43
NPAS3-211ENST00000551634 IGLV4-69A0A075B6H9 119 aa17.71■□□□□ 0.43
NPAS3-211ENST00000551634 SRSF9Q13242 221 aaKnown RBP eCLIP17.71■□□□□ 0.43
NPAS3-211ENST00000551634 TIMM17AQ99595 171 aa17.71■□□□□ 0.43
NPAS3-211ENST00000551634 KIR2DL4Q99706 377 aa17.71■□□□□ 0.43
NPAS3-211ENST00000551634 SPAG8Q99932 426 aaPredicted RBP17.71■□□□□ 0.43
NPAS3-211ENST00000551634 SPATA25Q9BR10 227 aa17.71■□□□□ 0.43
NPAS3-211ENST00000551634 TSSC4Q9Y5U2 329 aaPredicted RBP17.71■□□□□ 0.43
NPAS3-211ENST00000551634 MUC4Q99102 2169 aa17.71■□□□□ 0.43
NPAS3-211ENST00000551634 ID1P41134 155 aa17.71■□□□□ 0.43
NPAS3-211ENST00000551634 MRPL16Q9NX20 251 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms