RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 DNAH7Q8WXX0 4024 aa15.04■□□□□ -0
VPS29-206ENST00000549578 XKRY2A2RUG3 117 aa15.03■□□□□ -0
VPS29-206ENST00000549578 SCRT2Q9NQ03 307 aa15.03■□□□□ -0
VPS29-206ENST00000549578 TRGV2A0A075B6R0 118 aa15.02■□□□□ -0
VPS29-206ENST00000549578 ZNF876PQ49A33 203 aa15.02■□□□□ -0
VPS29-206ENST00000549578 SLC7A5P1Q8MH63 180 aa15.02■□□□□ -0
VPS29-206ENST00000549578 C15orf54Q8N8G6 183 aa15.02■□□□□ -0
VPS29-206ENST00000549578 RASL10AQ92737 203 aa15.02■□□□□ -0
VPS29-206ENST00000549578 TPPP3Q9BW30 176 aa15.02■□□□□ -0
VPS29-206ENST00000549578 SEC11CQ9BY50 192 aa15.02■□□□□ -0
VPS29-206ENST00000549578 MED14OSP0DP75 135 aa15.02□□□□□ -0.01
VPS29-206ENST00000549578 PNRC1Q12796 327 aaPredicted RBP15.02□□□□□ -0.01
VPS29-206ENST00000549578 OR10G8Q8NGN5 311 aa15.02□□□□□ -0.01
VPS29-206ENST00000549578 PHLDA3Q9Y5J5 127 aa15.02□□□□□ -0.01
VPS29-206ENST00000549578 V9GYV3 84 aa15.02□□□□□ -0.01
VPS29-206ENST00000549578 MUC21A0A0G2JKD1 596 aa15.01□□□□□ -0.01
VPS29-206ENST00000549578 MUC21A0A140T8X8 626 aa15.01□□□□□ -0.01
VPS29-206ENST00000549578 IGLC6P0CF74 106 aa15.01□□□□□ -0.01
VPS29-206ENST00000549578 HTN3P15516 51 aa15.01□□□□□ -0.01
VPS29-206ENST00000549578 FER1L6-AS1Q8NA97 138 aa15.01□□□□□ -0.01
VPS29-206ENST00000549578 OR10AG1Q8NH19 301 aa15.01□□□□□ -0.01
VPS29-206ENST00000549578 MUC7Q8TAX7 377 aa15.01□□□□□ -0.01
VPS29-206ENST00000549578 SNAI2O43623 268 aa15□□□□□ -0.01
VPS29-206ENST00000549578 OR5AL1P0C617 328 aa15□□□□□ -0.01
VPS29-206ENST00000549578 CT83Q5H943 113 aa15□□□□□ -0.01
VPS29-206ENST00000549578 PHLDA1Q8WV24 401 aaPredicted RBP15□□□□□ -0.01
VPS29-206ENST00000549578 SSBP4Q9BWG4 385 aaPredicted RBP15□□□□□ -0.01
VPS29-206ENST00000549578 A8MWL6 223 aa14.99□□□□□ -0.01
VPS29-206ENST00000549578 M0R381 172 aa14.99□□□□□ -0.01
VPS29-206ENST00000549578 SSTP61278 116 aa14.99□□□□□ -0.01
VPS29-206ENST00000549578 DMRTA1Q5VZB9 504 aa14.99□□□□□ -0.01
VPS29-206ENST00000549578 GTSF1Q8WW33 167 aa14.99□□□□□ -0.01
VPS29-206ENST00000549578 PTH2Q96A98 100 aa14.99□□□□□ -0.01
VPS29-206ENST00000549578 IGHV3-53P01767 116 aa14.98□□□□□ -0.01
VPS29-206ENST00000549578 C10orf91Q5T1B1 145 aa14.98□□□□□ -0.01
VPS29-206ENST00000549578 ZFAND6Q6FIF0 208 aa14.98□□□□□ -0.01
VPS29-206ENST00000549578 C18orf15Q96N68 181 aa14.98□□□□□ -0.01
VPS29-206ENST00000549578 TRAV10A0A0B4J240 114 aa14.97□□□□□ -0.01
VPS29-206ENST00000549578 ATP5G1P05496 136 aa14.97□□□□□ -0.01
VPS29-206ENST00000549578 LYZL1Q6UWQ5 148 aa14.97□□□□□ -0.01
VPS29-206ENST00000549578 ZFP82Q8N141 532 aa14.97□□□□□ -0.01
VPS29-206ENST00000549578 SYT8Q8NBV8 401 aa14.97□□□□□ -0.01
VPS29-206ENST00000549578 DEFB131BA0A096LNP1 70 aa14.97□□□□□ -0.01
VPS29-206ENST00000549578 A0A1W2PPQ1 181 aa14.97□□□□□ -0.01
VPS29-206ENST00000549578 SPANXN1Q5VSR9 72 aa14.97□□□□□ -0.01
VPS29-206ENST00000549578 POM121L12Q8N7R1 296 aa14.97□□□□□ -0.01
VPS29-206ENST00000549578 TSKUQ8WUA8 353 aa14.97□□□□□ -0.01
VPS29-206ENST00000549578 CARHSP1Q9Y2V2 147 aaKnown RBP14.97□□□□□ -0.01
VPS29-206ENST00000549578 RNF212Q495C1 297 aa14.96□□□□□ -0.02
VPS29-206ENST00000549578 JPT2Q9H910 190 aa14.96□□□□□ -0.02
VPS29-206ENST00000549578 NXPH4O95158 308 aa14.95□□□□□ -0.02
VPS29-206ENST00000549578 CTRLP40313 264 aa14.95□□□□□ -0.02
VPS29-206ENST00000549578 OR4C5Q8NGB2 326 aa14.95□□□□□ -0.02
VPS29-206ENST00000549578 ZNF479Q96JC4 524 aa14.95□□□□□ -0.02
VPS29-206ENST00000549578 CSMD3Q7Z407 3707 aa14.94□□□□□ -0.02
VPS29-206ENST00000549578 TRAV4A0A0B4J268 109 aa14.94□□□□□ -0.02
VPS29-206ENST00000549578 F2Z2F3 143 aa14.94□□□□□ -0.02
VPS29-206ENST00000549578 F5H768 121 aa14.94□□□□□ -0.02
VPS29-206ENST00000549578 HOXA5P20719 270 aa14.94□□□□□ -0.02
VPS29-206ENST00000549578 NDUFA5Q16718 116 aa14.94□□□□□ -0.02
VPS29-206ENST00000549578 PIK3CD-AS1Q5SR53 167 aa14.94□□□□□ -0.02
VPS29-206ENST00000549578 CFAP126Q5VTH2 177 aa14.94□□□□□ -0.02
VPS29-206ENST00000549578 PGLYRP4Q96LB8 373 aa14.94□□□□□ -0.02
VPS29-206ENST00000549578 NDUFAF3Q9BU61 184 aa14.94□□□□□ -0.02
VPS29-206ENST00000549578 NACAE9PAV3 2078 aa14.93□□□□□ -0.02
VPS29-206ENST00000549578 HIGD1CA8MV81 97 aa14.93□□□□□ -0.02
VPS29-206ENST00000549578 MT-ND4LP03901 98 aa14.93□□□□□ -0.02
VPS29-206ENST00000549578 GFRA4Q9GZZ7 299 aa14.93□□□□□ -0.02
VPS29-206ENST00000549578 RS1O15537 224 aa14.92□□□□□ -0.02
VPS29-206ENST00000549578 FOXA3P55318 350 aaPredicted RBP14.92□□□□□ -0.02
VPS29-206ENST00000549578 CEMP1Q6PRD7 247 aaPredicted RBP14.92□□□□□ -0.02
VPS29-206ENST00000549578 MSRB1Q9NZV6 116 aa14.92□□□□□ -0.02
VPS29-206ENST00000549578 NUPR2A6NF83 97 aa14.92□□□□□ -0.02
VPS29-206ENST00000549578 A8MWV9 139 aa14.92□□□□□ -0.02
VPS29-206ENST00000549578 PPP1R2P9O14990 202 aa14.92□□□□□ -0.02
VPS29-206ENST00000549578 CACNG7P62955 275 aa14.92□□□□□ -0.02
VPS29-206ENST00000549578 SAMD10Q9BYL1 202 aa14.92□□□□□ -0.02
VPS29-206ENST00000549578 STARD9Q9P2P6 4700 aa14.91□□□□□ -0.02
VPS29-206ENST00000549578 IGHV3-73A0A0B4J1V6 119 aa14.91□□□□□ -0.02
VPS29-206ENST00000549578 FAM231BA6NCW3 169 aa14.91□□□□□ -0.02
VPS29-206ENST00000549578 APOC3P02656 99 aa14.91□□□□□ -0.02
VPS29-206ENST00000549578 ANAPC16Q96DE5 110 aa14.91□□□□□ -0.02
VPS29-206ENST00000549578 A0A087WWL8 130 aa14.9□□□□□ -0.02
VPS29-206ENST00000549578 SMIM27A0A1W2PRY6 76 aa14.9□□□□□ -0.02
VPS29-206ENST00000549578 NTF3P20783 257 aa14.9□□□□□ -0.02
VPS29-206ENST00000549578 FHL2Q14192 279 aa14.9□□□□□ -0.02
VPS29-206ENST00000549578 CNFNQ9BYD5 112 aa14.9□□□□□ -0.02
VPS29-206ENST00000549578 IGHV4-4A0A075B6R2 117 aa14.89□□□□□ -0.03
VPS29-206ENST00000549578 TRGV4A0A0C4DH28 118 aa14.89□□□□□ -0.03
VPS29-206ENST00000549578 FAM74A4Q5TZK3 123 aa14.89□□□□□ -0.03
VPS29-206ENST00000549578 NUP35Q8NFH5 326 aa14.89□□□□□ -0.03
VPS29-206ENST00000549578 IGLL5B9A064 214 aa14.88□□□□□ -0.03
VPS29-206ENST00000549578 C3orf84H3BNL1 204 aa14.88□□□□□ -0.03
VPS29-206ENST00000549578 WDR73Q6P4I2 378 aa14.88□□□□□ -0.03
VPS29-206ENST00000549578 TMEM88Q6PEY1 159 aa14.88□□□□□ -0.03
VPS29-206ENST00000549578 CLRN3Q8NCR9 226 aa14.88□□□□□ -0.03
VPS29-206ENST00000549578 NAT8BQ9UHF3 227 aa14.88□□□□□ -0.03
VPS29-206ENST00000549578 CRYGDP07320 174 aa14.87□□□□□ -0.03
VPS29-206ENST00000549578 TWIST1Q15672 202 aa14.87□□□□□ -0.03
VPS29-206ENST00000549578 CASC10Q5T4H9 136 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms