RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 C18orf15Q96N68 181 aa14.96□□□□□ -0.01
CACNB3-210ENST00000548874 SSBP4Q9BWG4 385 aaPredicted RBP14.96□□□□□ -0.01
CACNB3-210ENST00000548874 XKRY2A2RUG3 117 aa14.95□□□□□ -0.02
CACNB3-210ENST00000548874 SNAI2O43623 268 aa14.95□□□□□ -0.02
CACNB3-210ENST00000548874 GATCO43716 136 aaKnown RBP14.95□□□□□ -0.02
CACNB3-210ENST00000548874 IGLC6P0CF74 106 aa14.95□□□□□ -0.02
CACNB3-210ENST00000548874 CT83Q5H943 113 aa14.95□□□□□ -0.02
CACNB3-210ENST00000548874 MUC4Q99102 2169 aa14.94□□□□□ -0.02
CACNB3-210ENST00000548874 GZMBP10144 247 aa14.94□□□□□ -0.02
CACNB3-210ENST00000548874 PNRC1Q12796 327 aaPredicted RBP14.94□□□□□ -0.02
CACNB3-210ENST00000548874 MUC7Q8TAX7 377 aa14.94□□□□□ -0.02
CACNB3-210ENST00000548874 SFRP2Q96HF1 295 aa14.94□□□□□ -0.02
CACNB3-210ENST00000548874 SEC11CQ9BY50 192 aa14.94□□□□□ -0.02
CACNB3-210ENST00000548874 F8W036 122 aa14.93□□□□□ -0.02
CACNB3-210ENST00000548874 OR5AL1P0C617 328 aa14.93□□□□□ -0.02
CACNB3-210ENST00000548874 C15orf54Q8N8G6 183 aa14.93□□□□□ -0.02
CACNB3-210ENST00000548874 NDUFAF3Q9BU61 184 aa14.93□□□□□ -0.02
CACNB3-210ENST00000548874 ZNF876PQ49A33 203 aa14.92□□□□□ -0.02
CACNB3-210ENST00000548874 PIK3CD-AS1Q5SR53 167 aa14.92□□□□□ -0.02
CACNB3-210ENST00000548874 C10orf91Q5T1B1 145 aa14.92□□□□□ -0.02
CACNB3-210ENST00000548874 V9GYV3 84 aa14.92□□□□□ -0.02
CACNB3-210ENST00000548874 TRGV2A0A075B6R0 118 aa14.91□□□□□ -0.02
CACNB3-210ENST00000548874 FER1L6-AS1Q8NA97 138 aa14.91□□□□□ -0.02
CACNB3-210ENST00000548874 OR10G8Q8NGN5 311 aa14.91□□□□□ -0.02
CACNB3-210ENST00000548874 PHLDA3Q9Y5J5 127 aa14.91□□□□□ -0.02
CACNB3-210ENST00000548874 TRAV10A0A0B4J240 114 aa14.9□□□□□ -0.02
CACNB3-210ENST00000548874 A0A1W2PPQ1 181 aa14.9□□□□□ -0.02
CACNB3-210ENST00000548874 A8MWL6 223 aa14.9□□□□□ -0.02
CACNB3-210ENST00000548874 NXPH4O95158 308 aa14.9□□□□□ -0.02
CACNB3-210ENST00000548874 ATP5G1P05496 136 aa14.9□□□□□ -0.02
CACNB3-210ENST00000548874 OR10AG1Q8NH19 301 aa14.9□□□□□ -0.02
CACNB3-210ENST00000548874 PHLDA1Q8WV24 401 aaPredicted RBP14.9□□□□□ -0.02
CACNB3-210ENST00000548874 DNAH7Q8WXX0 4024 aa14.89□□□□□ -0.03
CACNB3-210ENST00000548874 DMRTA1Q5VZB9 504 aa14.89□□□□□ -0.03
CACNB3-210ENST00000548874 ZFP82Q8N141 532 aa14.89□□□□□ -0.03
CACNB3-210ENST00000548874 POM121L12Q8N7R1 296 aa14.89□□□□□ -0.03
CACNB3-210ENST00000548874 GTSF1Q8WW33 167 aa14.89□□□□□ -0.03
CACNB3-210ENST00000548874 CARHSP1Q9Y2V2 147 aaKnown RBP14.89□□□□□ -0.03
CACNB3-210ENST00000548874 DEFB131BA0A096LNP1 70 aa14.88□□□□□ -0.03
CACNB3-210ENST00000548874 CTRLP40313 264 aa14.88□□□□□ -0.03
CACNB3-210ENST00000548874 SYT8Q8NBV8 401 aa14.88□□□□□ -0.03
CACNB3-210ENST00000548874 TSKUQ8WUA8 353 aa14.88□□□□□ -0.03
CACNB3-210ENST00000548874 GFRA4Q9GZZ7 299 aa14.88□□□□□ -0.03
CACNB3-210ENST00000548874 TRAV4A0A0B4J268 109 aa14.87□□□□□ -0.03
CACNB3-210ENST00000548874 FAM231BA6NCW3 169 aa14.87□□□□□ -0.03
CACNB3-210ENST00000548874 F2Z2F3 143 aa14.87□□□□□ -0.03
CACNB3-210ENST00000548874 FOXA3P55318 350 aaPredicted RBP14.87□□□□□ -0.03
CACNB3-210ENST00000548874 LYZL1Q6UWQ5 148 aa14.87□□□□□ -0.03
CACNB3-210ENST00000548874 M0R381 172 aa14.86□□□□□ -0.03
CACNB3-210ENST00000548874 RS1O15537 224 aa14.86□□□□□ -0.03
CACNB3-210ENST00000548874 CEMP1Q6PRD7 247 aaPredicted RBP14.86□□□□□ -0.03
CACNB3-210ENST00000548874 SLC7A5P1Q8MH63 180 aa14.86□□□□□ -0.03
CACNB3-210ENST00000548874 TPPP3Q9BW30 176 aa14.86□□□□□ -0.03
CACNB3-210ENST00000548874 CNFNQ9BYD5 112 aa14.86□□□□□ -0.03
CACNB3-210ENST00000548874 IGHV4-4A0A075B6R2 117 aa14.85□□□□□ -0.03
CACNB3-210ENST00000548874 MUC21A0A0G2JKD1 596 aa14.85□□□□□ -0.03
CACNB3-210ENST00000548874 MUC21A0A140T8X8 626 aa14.85□□□□□ -0.03
CACNB3-210ENST00000548874 NUPR2A6NF83 97 aa14.85□□□□□ -0.03
CACNB3-210ENST00000548874 C3orf84H3BNL1 204 aa14.85□□□□□ -0.03
CACNB3-210ENST00000548874 HTN3P15516 51 aa14.85□□□□□ -0.03
CACNB3-210ENST00000548874 NDUFA5Q16718 116 aa14.85□□□□□ -0.03
CACNB3-210ENST00000548874 RNF212Q495C1 297 aa14.85□□□□□ -0.03
CACNB3-210ENST00000548874 CFAP126Q5VTH2 177 aa14.85□□□□□ -0.03
CACNB3-210ENST00000548874 ZFAND6Q6FIF0 208 aa14.85□□□□□ -0.03
CACNB3-210ENST00000548874 ZNF479Q96JC4 524 aa14.85□□□□□ -0.03
CACNB3-210ENST00000548874 A8MWV9 139 aa14.84□□□□□ -0.03
CACNB3-210ENST00000548874 PPP1R2P9O14990 202 aa14.84□□□□□ -0.03
CACNB3-210ENST00000548874 IGHV3-53P01767 116 aa14.84□□□□□ -0.03
CACNB3-210ENST00000548874 HOXA5P20719 270 aa14.84□□□□□ -0.03
CACNB3-210ENST00000548874 CACNG7P62955 275 aa14.84□□□□□ -0.03
CACNB3-210ENST00000548874 SPANXN1Q5VSR9 72 aa14.84□□□□□ -0.03
CACNB3-210ENST00000548874 WDR73Q6P4I2 378 aa14.84□□□□□ -0.03
CACNB3-210ENST00000548874 OR4C5Q8NGB2 326 aa14.84□□□□□ -0.03
CACNB3-210ENST00000548874 JPT2Q9H910 190 aa14.84□□□□□ -0.03
CACNB3-210ENST00000548874 F5H768 121 aa14.83□□□□□ -0.04
CACNB3-210ENST00000548874 MT-ND4LP03901 98 aa14.83□□□□□ -0.04
CACNB3-210ENST00000548874 ANAPC16Q96DE5 110 aa14.83□□□□□ -0.04
CACNB3-210ENST00000548874 NACAE9PAV3 2078 aa14.82□□□□□ -0.04
CACNB3-210ENST00000548874 SMIM27A0A1W2PRY6 76 aa14.82□□□□□ -0.04
CACNB3-210ENST00000548874 HIGD1CA8MV81 97 aa14.82□□□□□ -0.04
CACNB3-210ENST00000548874 CIDEAO60543 219 aa14.82□□□□□ -0.04
CACNB3-210ENST00000548874 FHL2Q14192 279 aa14.82□□□□□ -0.04
CACNB3-210ENST00000548874 UFSP1Q6NVU6 142 aa14.82□□□□□ -0.04
CACNB3-210ENST00000548874 CASC10Q5T4H9 136 aa14.81□□□□□ -0.04
CACNB3-210ENST00000548874 PGLYRP4Q96LB8 373 aa14.81□□□□□ -0.04
CACNB3-210ENST00000548874 SAMD10Q9BYL1 202 aa14.81□□□□□ -0.04
CACNB3-210ENST00000548874 CRYGDP07320 174 aa14.8□□□□□ -0.04
CACNB3-210ENST00000548874 NTF3P20783 257 aa14.8□□□□□ -0.04
CACNB3-210ENST00000548874 ZFP2Q6ZN57 461 aa14.8□□□□□ -0.04
CACNB3-210ENST00000548874 FAM210BQ96KR6 192 aa14.8□□□□□ -0.04
CACNB3-210ENST00000548874 MSRB1Q9NZV6 116 aa14.8□□□□□ -0.04
CACNB3-210ENST00000548874 KLK5Q9Y337 293 aaPredicted RBP14.8□□□□□ -0.04
CACNB3-210ENST00000548874 SSTP61278 116 aa14.79□□□□□ -0.04
CACNB3-210ENST00000548874 NUP35Q8NFH5 326 aa14.79□□□□□ -0.04
CACNB3-210ENST00000548874 NAT8BQ9UHF3 227 aa14.79□□□□□ -0.04
CACNB3-210ENST00000548874 TRGV4A0A0C4DH28 118 aa14.78□□□□□ -0.04
CACNB3-210ENST00000548874 RHODO00212 210 aa14.78□□□□□ -0.04
CACNB3-210ENST00000548874 TMEM88Q6PEY1 159 aa14.78□□□□□ -0.04
CACNB3-210ENST00000548874 CLRN3Q8NCR9 226 aa14.78□□□□□ -0.04
CACNB3-210ENST00000548874 AP1S3Q96PC3 154 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms